Labshake search
Citations for Illumina :
2401 - 2450 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2024Quote: Single-cell sequencing reads from the Perturb-seq experiment were demultiplexed using DRAGEN 4.2 (Illumina). Reads were then aligned to the human genome GRChg38 using CellRanger v7.0.1 ...
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bioRxiv - Neuroscience 2024Quote: ... (2017 PMID: 29155775) using Nextera XT Index kit (Illumina-15055293). Extracted DNA concentration was measured by 2200 Tapestation (Agilent Technologies) ...
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing was performed on a NextSeq 2000 system (Illumina). All scRNA-seq reactions were performed at the GTL (Heinrich Heine University Düsseldorf).
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bioRxiv - Bioengineering 2024Quote: scRNA libraries were pooled and sequenced using the NovaSeq 6000 instrument (Illumina) generating 100-bp paired end reads ...
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bioRxiv - Bioengineering 2024Quote: ... FASTQ files were generated from base calls with the bcl2fastq software (Illumina), and reads were mapped to the pre-built GRCh38 reference (refdata-gex-GRCh38-2020-A ...
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bioRxiv - Cancer Biology 2024Quote: ... and sequenced with a NovaSeq sequencing system using the 2 x 150 bp protocol (Illumina) for approximately 25-30 million reads per sample.
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing was performed with the NovaSeq sequencing system using the 2 x 150 bp protocol (Illumina).
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bioRxiv - Cancer Biology 2024Quote: ... raw base call (BCL) files generated by Illumina sequencer were processed as previously described [79].
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bioRxiv - Biophysics 2024Quote: ... High-throughput sequencing was conducted on the Genome Analyzer IIx (Illumina).
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bioRxiv - Cancer Biology 2024Quote: ... using the HiSeq 3000/4000 SBS Kit (Illumina). An average of 100 million paired reads was generated per sample ...
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bioRxiv - Bioengineering 2024Quote: ... After demultiplexing in Basespace by Illumina indices ...
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bioRxiv - Cancer Biology 2024Quote: ... 150pg of cDNA was used to generate Illumina compatible sequencing libraries with the NexteraXT library preparation kit (Illumina Inc.) per manufacturer’s protocols ...
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bioRxiv - Cancer Biology 2024Quote: ... The amplified libraries were hybridized to the Illumina flow cell and sequenced using the llumina NextSeq 550 (Illumina Inc.). Single end reads of 100nt were generated for each sample ...
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bioRxiv - Cancer Biology 2024Quote: ... 500 ng of total RNA with RQN values of 9.1-10 underwent polyA selection and TruSeq library preparation according to instructions provided by Illumina (TruSeq Stranded mRNA LT Kit ...
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bioRxiv - Cancer Biology 2024Quote: ... Paired-end sequencing was conducted using the Illumina NextSeq 500 instrument (Illumina®, San Diego, USA) and the NextSeq 500/550 High Output kit v2.5 (150 cycles) ...
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bioRxiv - Cancer Biology 2024Quote: ... RNA-seq libraries were prepared with the TruSeq RNA Library Prep Kit v2 (Illumina) and sequenced on a NovoSeq6000 to produce 2x150 bp reads ...
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bioRxiv - Cancer Biology 2024Quote: ... libraries were normalised to ∼6nM and submitted to cluster formation for sequencing on a Novaseq6000 (Illumina) to generate 100 bp paired-end reads.
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were pooled and sequenced on a MiSeq instrument (Illumina, San Diego, CA) using the MiSeq Reagent Kit v2 and generating 2x 150 base-paired reads.
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bioRxiv - Evolutionary Biology 2024Quote: ... DNA was fragmented with Nextera reagent (Illumina, Inc), which also ligates short adapter sequences to the ends of the fragments ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Individual libraries were combined into three pools and 2×150 bp paired-end sequenced in three lanes of a S4 flowcell using the NovaSeq 6000 instrument and v1 sequencing chemistry (Illumina Inc.). Sequencing was done by the National Genomics Infrastructure ...
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bioRxiv - Cancer Biology 2024Quote: ... Tagmentation was performed with 7.5 nL Bead-Linked Transposomes (BLT, Illumina DNA Prep 20060059), 7.5 nL Tagmentation Buffer 1 (TB1 ...
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bioRxiv - Cell Biology 2024Quote: ... Paired end sequencing was performed on Illumina HighSeq 4000 (Illumina Inc., San Diego, CA).
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bioRxiv - Genetics 2024Quote: ... according to the manufacture’s instruction and analyzed by Illumina HiSeq 2500 system (Illumina) ...
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Evolutionary Adaptation of an HP1-protein Chromodomain Integrates Chromatin and DNA Sequence SignalsbioRxiv - Genetics 2024Quote: ... according to manufacturer’s instructions and sequenced on a NovaSeqSP instrument (Illumina).
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bioRxiv - Developmental Biology 2024Quote: RNA-seq analysis was performed by Macrogen (Amsterdam, Netherlands) using the TruSeq Stranded Total RNA kit (Illumina) with a NovaSeq600 platform ...
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bioRxiv - Cell Biology 2024Quote: ... RNA libraries were prepared using the Illumina Stranded mRNA Prep kit (Illumina Inc., San Diego, CA). Then libraries were sequenced using the Illumina NovaSeqS4 platform with a read depth of 25M reads/sample (n=3/region/timepoint) ...
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bioRxiv - Cell Biology 2024Quote: ... in paired-end mode (2×40 cycles) and a NextSeq 2000 instrument (Illumina) in paired-end mode (2×50 cycles) ...
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bioRxiv - Cancer Biology 2024Quote: ... and the 10x Genomics recommended sequencing parameters were used to run on the NovaSeq 6000 with S4 PE 100 kits (Illumina).
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bioRxiv - Cancer Biology 2024Quote: ... permeabilized and transposed with 2.1 µL Tn5 (Illumina) for 30 min with mixing (1000 rpm) ...
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bioRxiv - Cell Biology 2024Quote: ... Indexed libraries were pooled equimolar and sequenced on a NovaSeq 6000 in a PE28/88 run using the NovaSeq 6000 SP Reagent Kit (100 cycles) (Illumina). FASTQ files from sequencing (NovaSeq ...
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bioRxiv - Cell Biology 2024Quote: ... using the NovaSeq 6000 SX Reagent Kit (Illumina). An average of 24 million paired reads was generated per sample ...
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bioRxiv - Cell Biology 2024Quote: ... using the NovaSeq 6000 S4 Reagent Kit (300 Cycles) (Illumina). The average number of read pairs per sample was 1.3M ...
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bioRxiv - Cancer Biology 2024Quote: ... PCR amplicons were then purified and sequenced on a NextSeq 2000 (Illumina). Sequencing reads were mapped and the abundance of each sgRNA was measured ...
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bioRxiv - Cell Biology 2024Quote: ... Clustering and sequencing were performed on a NovaSeq 6000 (Illumina, San Diego, CA, USA) using the paired-end 28-90 nt protocol on one lane of an SP flow cell and on one lane of an S4 flow cell ...
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bioRxiv - Cell Biology 2024Quote: ... 22 μl of nuclease-free water) (Illumina, #20034197 and Promega, #G9441) at 37°C for 30 minutes with 300 rpm shaking ...
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bioRxiv - Cell Biology 2024Quote: ... The libraries were then sequenced on NovaSeq (Illumina) at the NIAMS sequencing core facility ...
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bioRxiv - Cancer Biology 2024Quote: ... Total RNA-seq libraries were constructed employing TruSeq Stranded Total RNA with Ribo-Zero Gold (Illumina), following the guidelines provided by the manufacturer ...
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bioRxiv - Cancer Biology 2024Quote: ... RNA concentration was quantified using a Nanodrop and 1 µg of RNA per sample was submitted to the Abigail Wexner Research Institute Genomic Services Laboratory for library preparation using the TruSeq Stranded mRNA Kit (Illumina 20020594), library quality control ...
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing of the libraries was executed using the NovaSeq 6000 System S1 200 (Illumina, CA, USA) aiming for a sequencing depth of around 250 million read pairs per sample ...
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bioRxiv - Cancer Biology 2024Quote: ... raw base call files were converted to FASTQ format with bcl2fastq (Illumina). Cellranger count (v6.0.2 ...
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bioRxiv - Cancer Biology 2024Quote: ... using IDT for Illumina RNA UD Indexes (Illumina: 20040553-6). Library quantification and assessment was done using a Qubit FLEX fluorometer and an Agilent TapeStation 4150/Fragment Analyzer 5300 ...
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were generated with the Illumina Stranded mRNA Library Prep kit (Illumina: 20040534) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2024Quote: ... Tn5 transposase reaction was performed using the Tagment DNA Enzyme 1 (Illumina) at 37 °C for 30 min ...
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bioRxiv - Cancer Biology 2024Quote: ... respectively (Cufflinks Assembly & DE app; Illumina Basespace). For robust identification and statistical validation of differentially expressed genes ...
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bioRxiv - Cancer Biology 2024Quote: Total RNA was extracted using Qiagen’s RNeasy kit and sent to Active motif for 150 bp paired end sequencing by Illumina NovaSeq platform ...
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bioRxiv - Cancer Biology 2024Quote: ... by the Functional Genomics Centre Zurich (FGCZ) according to the TruSeq stranded mRNA library preparation protocol (Illumina). The NovaSeq 6000 instrument (Illumina ...
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bioRxiv - Cancer Biology 2024Quote: ... The NovaSeq 6000 instrument (Illumina) was used by the FGCZ to perform paired-end sequencing at 150 bp read length.
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bioRxiv - Cell Biology 2024Quote: The scRNA-seq data produced by Illumina NovaSeq 6000 sequencing were processed and mapped to human reference genome hg38 ...
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bioRxiv - Cancer Biology 2024Quote: ... Lexogen’s QuantSeq 3’mRNA-seq Library Prep Kit (FWD for Illumina) was utilized for building RNA-seq libraries from 0.1-200 ng of total RNA in 5 µl of nuclease-free ultrapure water ...
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bioRxiv - Cell Biology 2024Quote: ... and a 2 pM solution of this pool was sequenced unidirectionally on a NextSeq® 500 System (Illumina) at GeneCore ...