Labshake search
Citations for Illumina :
5251 - 5300 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were paired-end sequenced (2×75 bp) on a NextSeq500 (Illumina). BclToFastq was used for the preprocessing of the raw data (trimming and filtering) ...
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bioRxiv - Cancer Biology 2023Quote: ... was added to the pooled amplicon library prior to running the sample on an Miseq Sequencer System (Illumina) to generate paired 2 × 250bp reads ...
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bioRxiv - Cancer Biology 2023Quote: ... Base calling was done by Illumina RTA3 and output of NCS was demultiplexed and converted to FastQ format with Illumina Bcl2fastq v1.9.0.
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bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq6000 sequencer using an S2 sequencing kit (Illumina Inc., San Diego, CA, USA) to an average depth of 45M reads per sample ...
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bioRxiv - Cancer Biology 2023Quote: ... cDNA fragments were ligated to IDT for Illumina TruSeq UD Indexed adapters (Illumina Inc, San Diego CA, USA). Quality and quantity of the finished libraries were assessed using a combination of Agilent DNA High Sensitivity chip (Agilent Technologies ...
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bioRxiv - Cancer Biology 2023Quote: ... Paired-end DNA sequencing of the amplicons from all samples and both variables regions was completed in the same run on a MiSeq machine (M04141, Illumina, San Diego, CA, USA) using the 2x300 base pair chemistry (Reagent barcode ...
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bioRxiv - Cancer Biology 2023Quote: ... Pooled libraries were sequenced on NextSeq 2000 (Illumina) targeting 20,000 reads per cell ...
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bioRxiv - Cancer Biology 2023Quote: ... The exomic libraries were run on the NextSeq500 next generation sequencer from Illumina (Illumina, San Diego, CA) with paired end 75 bp reads using standard techniques ...
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bioRxiv - Cancer Biology 2023Quote: ... The exomic libraries were run on the NextSeq500 next generation sequencer from Illumina (Illumina, San Diego, CA) with paired end 75 bp reads using standard techniques ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced as 100 base single end reads on an Illumina HiSeq 2500 using TruSeq Rapid SBS sequencing kit version 1 and HCS version 2.0.12.0 data collection software (Illumina, San Diego, CA). Base-calling is performed using Illumina’s RTA version 1.17.21.3 ...
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bioRxiv - Cancer Biology 2023Quote: ... (Illumina) as described elsewhere.
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bioRxiv - Cancer Biology 2023Quote: ... spiked with 10% commercially prepared PhiX library (Illumina) and sequenced as 100 base single end reads on an Illumina HiSeq 2500 using TruSeq Rapid SBS sequencing kit version 1 and HCS version 2.0.12.0 data collection software (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were pooled and sequenced on a HiSeq2500 or NovaSeq instrument (Illumina) at the WCM NGS core facility ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced using an Illumina NovaSeq 6000 (Illumina Inc, San Diego, CA) at the Columbia Genome Center ...
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bioRxiv - Synthetic Biology 2023Quote: ... The Illumina DNA libraries were prepared using the Illumina DNA Prep kit (USA) and the Nextera™ DNA CD Indexes (Illumina, USA). The average length of the DNA libraries was evaluated using Agilent Bioanalyzer 2100 and a High Sensitivity Kit (Agilent Technologies ...
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bioRxiv - Synthetic Biology 2023Quote: ... The MiniSeq Mid Output Kit (300-cycles) (Illumina, USA) was used for paired-end sequencing (2x150 bp) ...
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bioRxiv - Plant Biology 2023Quote: ... and sequencing of 2 × 100 bp paired-end reads using the NovaSeq 6000 (Illumina, United States). Obtained raw reads were mapped to strain the V35 genome using Kallist 0.43.1 with the default setting (Bray et al ...
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bioRxiv - Plant Biology 2023Quote: ... RNA libraries were generated using the TruSeq RNA sample preparation kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2023Quote: ... Hi-C libraries were sequenced on Illumina NextSeq500 (Illumina, San Diego, CA, USA) platform using platform using High Output Kit v2.5 (150 Cycles).
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bioRxiv - Plant Biology 2023Quote: ... and sequenced on Illumina HiSeq2000 (Illumina, San Diego, CA, USA) platform using HiSeq SBS Kit (200 Cycles).
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bioRxiv - Bioengineering 2023Quote: ... The resulting mRNA library was sequenced as 2 x 75 bp paired-end reads on a NextSeq 500 sequencer (Illumina). For 16-weeks and ITGβ1+ / CXCR4+ sorted cells cDNA library was prepared using the whole transcriptome Ovation Solo RNA seq Library Preparation Kit (TECAN ...
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bioRxiv - Bioengineering 2023Quote: ... For 4-week and 8-week organoids cDNA library was prepared by using the whole transcriptome Illumina TruSeq Stranded Total RNA Library Prep Kit Gold (Illumina), followed by evaluation on an Agilent 2100 Bioanalyzer by using the DNA 1000 kit ...
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bioRxiv - Microbiology 2023Quote: ... DNA-Seq libraries from 2.5 µg of genome DNA were prepared using the TruSeq DNA PCR-free kit (Illumina). Then ...
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bioRxiv - Microbiology 2023Quote: ... paired-end cDNA libraries were prepared from 1.5 µg of total RNA by polyA selection using the TruSeq Stranded mRNA kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2023Quote: ... 100 bases were sequenced from both ends using an Illumina NextSeq500 instrument according to the manufacturer’s instructions (Illumina).
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bioRxiv - Microbiology 2023Quote: ... The BAC sequence was verified by Illumina-based next generation sequencing.
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bioRxiv - Bioengineering 2023Quote: ... and then sequenced using a NovaSeq S4 (Illumina) at a read length of 2x150bp and average depth of 12 million reads ...
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bioRxiv - Neuroscience 2023Quote: ... Participants were genotyped using the Infinium PsychArray (Illumina, San Diego, CA, USA) in two batches (2015 and 2017 ...
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bioRxiv - Microbiology 2023Quote: ... The 16S rRNA gene amplicons were sequenced using the 2 x 300 bp paired-end MiSeq protocol (Illumina).
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bioRxiv - Bioengineering 2023Quote: ... Following Illumina barcoding (Nextera indices, Illumina), PCR samples were pooled ...
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bioRxiv - Microbiology 2023Quote: ... and treated with the RiboZero® rRNA Removal Kit for Bacteria (Illumina) to deplete rRNA ...
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bioRxiv - Plant Biology 2023Quote: ... purified and sequenced by Illumina Miseq platform.
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bioRxiv - Bioengineering 2023Quote: ... Single-cell libraries were sequenced on NovaSeq (Illumina) to a depth of 50,000 reads per cell.
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bioRxiv - Cancer Biology 2023Quote: ... The indexed cDNA libraries were sequenced on the Illumina 2000 or Nextseq 550 (Illumina, San Diego, CA) for a 75-cycle v2 sequencing run generating 75 bp single-end reads ...
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bioRxiv - Cancer Biology 2023Quote: ... One ng cDNA was used for library preparation using Nextera XT DNA Library Preparation Kit (FC-131-1024 & FC-131- 1096, Illumina). The yield and quality of the amplified libraries were analyzed using Qubit by Thermo Fisher and the Agilent Tapestation System ...
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bioRxiv - Cell Biology 2023Quote: Sequencing was performed using a NextSeq 2000 machine (Illumina; up to 120 cycles ...
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bioRxiv - Cell Biology 2023Quote: ... Samples were then amplified and paired-end sequencing (2 x 41 cycles) was performed on NextSeq 500 (Illumina). See Supplementary Table 2 for sequenced ATAC-seq samples.
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bioRxiv - Biochemistry 2023Quote: ... Microbial composition was determined by sequencing the V3V4 region of the 16S ribosomal gene using a MiSeq platform (Illumina, USA). The sequence library was constructed according to the Illumina library preparation protocol with minor differences to the V3V4 protocol ...
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bioRxiv - Bioengineering 2023Quote: ... primers were designed containing a universal linker sequence allowing amplicons for incorporation indexes and sequencing primers by Nextera XT Index kit (ILLUMINA); and 16S rRNA gene universal primers (Klindwoth2013) ...
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bioRxiv - Genetics 2023Quote: ... and used to prepare RNA libraries utilizing the TruSeq Stranded mRNA Kit (Illumina #20020595) and sequenced as single-end 50 bp reads using an Illumina HiSeq 4000 platform.
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bioRxiv - Animal Behavior and Cognition 2023Quote: ... The libraries were sequenced after onboard cluster generation using HiSeq Rapid SBS Kit v2 (200 cycles) and HiSeq PE Rapid Cluster Kit v2 (Illumina) on a HiSeq 1500 (Illumina) ...
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bioRxiv - Animal Behavior and Cognition 2023Quote: ... The 16S rDNA V3-V4 region was amplified by PCR and sequenced in the HiSeq platform (Illumina). The raw reads were processed and clustered into Operational Taxonomic Units (OTUs ...
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bioRxiv - Bioengineering 2023Quote: ... Libraries were then sequenced on Novaseq SP (235-400M/lane) (Illumina). The Cell Ranger pipeline was used for sample de-multiplexing ...
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bioRxiv - Bioengineering 2023Quote: ... A total of 50 ng of DNA was amplified following the 16S Metagenomic Sequencing Library Illumina 15044223 B protocol (ILLUMINA).
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bioRxiv - Bioengineering 2023Quote: Libraries were pooled prior to sequencing on the MiSeq platform (Illumina), 250 cycles paired reads configuration ...
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bioRxiv - Genetics 2023Quote: ... then single read 50 bp sequencing runs were performed on an Illumina HiScan SQ instrument (Illumina) using TruSeq SBS Kit v3 - HS (50-cycles) ...
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bioRxiv - Genetics 2023Quote: ... Ligation kit (Illumina), followed by 100 bp single-end sequencing on an Illumina NovaSeq 6000 SP system.
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bioRxiv - Genomics 2023Quote: ... DNA libraries were synthesised from 3.9 μg of gDNA using the Illumina TruSeq DNA PCR-Free kit (Illumina, San Diego, CA, USA) and sequenced on Illumina NovaSeq 6000 platform (Illumina ...
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bioRxiv - Genomics 2023Quote: ... The sequencing of the Hi-C libraries (∼300bp insert size) was carried out on an Illumina NovaSeq 6000 platform (Illumina, San Diego, CA, USA) in the 2×150bp mode by Genewiz (Suzhou ...
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bioRxiv - Genomics 2023Quote: ... and 0.2 µg/µL of DNA was sequenced by Illumina MiSeq runs (Illumina Inc. ...