Labshake search
Citations for Illumina :
5101 - 5150 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2023Quote: ... generation of double stranded cDNA and subsequent library preparation and indexing to facilitate multiplexing (Illumina TruSeq). All libraries were quantified with the Fragment Analyzer using the standard sensitivity NGS kit (Agilent Technologies ...
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bioRxiv - Neuroscience 2023Quote: ... mRNA was prepared for sequencing using the TruSeq stranded mRNA sample preparation kit (Illumina), with a selected insert size of 120–210 bp ...
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bioRxiv - Microbiology 2023Quote: ... the TruSeq Stranded Library Preparation kit (Illumina) was used to prepare the sequencing library ...
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bioRxiv - Microbiology 2023Quote: ... Individual libraries were barcoded with Nextera DNA CD Indexes (Illumina) and analyzed for average size distribution and concentration on a High Sensitivity DNA Bioanalyzer chip from Agilent Technologies ...
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bioRxiv - Microbiology 2023Quote: Dual-indexed paired-end libraries for whole genome sequencing were prepared with the Nextera DNA Flex Library Prep Kit from Illumina. Individual libraries were barcoded with Nextera DNA CD Indexes (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... and sequencing libraries were constructed with NEBNext UltraII Directional RNA Library Preparation Kit (Illumina, #E7760) as described previously [65] ...
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bioRxiv - Microbiology 2023Quote: ... with MiSeq reagent kit v3 (Illumina, Cat# MS-102-3001). Sequencing reads were trimmed using fastp v0.21.036 and subsequently mapped to the viral genome sequences of a lineage B isolate (strain Wuhan-Hu-1 ...
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bioRxiv - Microbiology 2023Quote: ... Paired-end 76-bp sequencing was performed using a MiSeq system (Illumina) with MiSeq reagent kit v3 (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... 3-5 µg of each sample was treated with Ribozero® rRNA Removal Kit according to the manufacturer’s instructions (Illumina, USA ...
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Borrelia PeptideAtlas: A proteome resource of common Borrelia burgdorferi isolates for Lyme researchbioRxiv - Biochemistry 2023Quote: ... Libraries were run on an Illumina NextSeq500 sequencer with High Output Flowcell (Illumina, USA) for 150 cycles ...
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bioRxiv - Bioengineering 2023Quote: ... Library was sequenced on an Illumina MiSeq instrument using Illumina MiSeq Reagent Kit v2 Micro (300-cycles) with 50% PhiX spike-in (Illumina). After demultiplexing ...
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bioRxiv - Developmental Biology 2023Quote: ... Libraries were sequenced on a NextSeq500 or HiSeq4000 (Illumina) using custom sequencing primers.
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bioRxiv - Developmental Biology 2023Quote: ... BCL files from Illumina were processed into FASTQ format ...
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bioRxiv - Cell Biology 2023Quote: ... the Truseq Stranded mRNA kit (Illumina) was used with an input of 100 nanograms of total RNA ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were pooled and sequenced on NovaSeq 6000 (Illumina) to generate 30 millions single-end 50-base pair reads for each sample ...
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bioRxiv - Immunology 2023Quote: ... The cDNA libraries were sequenced on Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell for gene expression and BCR libraries ...
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bioRxiv - Immunology 2023Quote: ... 1ng of amplified cDNA was used to generate barcoded libraries with the Nextera XT DNA library preparation kit (Illumina). The size of the libraries was checked using the Agilent 2100 Bioanalyzer High Sensitivity DNA chip and their [EMG1] concentration was determined using the Qubit® fluorometer (Thermo Fisher Scientific).
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bioRxiv - Genomics 2023Quote: We assessed genotype accuracy using hap.py (v0.3.15) (https://github.com/Illumina/hap.py), using the short read-called variants as truth and the HiFi-called variants as query ...
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bioRxiv - Genomics 2023Quote: ... The transposition reaction was incubated for 30 min or 1h at 37◦C (Illumina Tagment DNA Enzyme and Buffer kit ...
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bioRxiv - Genomics 2023Quote: ... Methylated adaptors (NEBNext Multiplex Oligos for Illumina; cat#: E7535L New England BioLabs) were ligated to the product from the preceding step using the NEBNext Ultra Ligation Module (cat# ...
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bioRxiv - Genomics 2023Quote: ... and were sequenced on NovaSeq (Illumina) at Macrogen (Seoul ...
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bioRxiv - Genomics 2023Quote: ... Clustering and sequencing were performed on a NovaSeq 6000 (Illumina, San Diego, CA, USA) using the paired end 150 nt protocol on 1 lane of a flow cell SP ...
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bioRxiv - Genomics 2023Quote: ... and sequenced with a MiSeq system and v3 chemistry (600 cycles) following the instructions of the manufacturer (Illumina, San Diego, CA, USA). Sequencing kits and program versions for Nanopore sequencing are shown in the Supplementary Table S1 ...
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bioRxiv - Genomics 2023Quote: ... All samples were sequenced in the MSU RTSF Genomics core with paired-end 150 bp reads on an HiSeq 6000 system (Illumina, San Diego, CA). Reads were quality and adapter trimmed using trimmomatic version 0.38 62 ...
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bioRxiv - Genomics 2023Quote: ... a total of 0.75 ng of DNA was combined with 2.5 µl 1/35th diluted transposome (Illumina; purchased in kit # FC-121-1011), and 1X Tris Buffer (10X Tris Buffer ...
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bioRxiv - Developmental Biology 2023Quote: ... the libraries were multiplexed into one pool and sequenced using the Illumina HiSeq2500 instrument (Illumina) at National Institute for Basic Biology in Okazaki ...
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bioRxiv - Developmental Biology 2023Quote: ... RNA samples were sequenced using NovaSeq 6000 platform (Illumina). Reads were aligned to the zebrafish genome (GRCz11 ...
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bioRxiv - Developmental Biology 2023Quote: ... and cDNA libraries were generated using the Illumina TruSeq Stranded mRNA Sample Prep Kit (Illumina). Samples were sequenced on the Illumina HiSeq2500 platform as 150-bp single-end reads ...
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bioRxiv - Cell Biology 2023Quote: ... Paired-end sequencing was performed on a NovaSeq 6000 system (Illumina, San Diego, CA, USA) for 25-50 M reads per library ...
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bioRxiv - Developmental Biology 2023Quote: ... The final libraries were sequenced on an Illumina NovaSeq6000 (Illumina, San Diego) with pair-end 150 bp (PE150 ...
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bioRxiv - Developmental Biology 2023Quote: ... the raw BCL files generated by Illumina NovaSeq 6000 sequencer were demultiplexed into fastq files by function mkfastq ...
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bioRxiv - Microbiology 2023Quote: ... on an automatic sequencer MiSeq (Illumina, Inc., USA) using primers for the V3–V4 region of 16S rRNA ...
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bioRxiv - Microbiology 2023Quote: ... jejuni NCTC12658 was done on the Illumina platform (Illumina Hiseq and Miseq) and on a PacBio RS II device (Pacific Biosciences ...
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bioRxiv - Cell Biology 2023Quote: ... and then subjected to the transcriptomic sequencing by Beijing Genomics Institute (BGI, Shenzhen, China) on an Illumina HiSeq 2000 sequencing system (Illumina, San Diego, CA). All the detected mRNAs were fragmented into short fragments of approximately 200 bp ...
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bioRxiv - Cell Biology 2023Quote: ... Selected clones were then analyzed by next generation sequencing (Illumina) of the targeted exon.
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bioRxiv - Developmental Biology 2023Quote: ... and multiplexed by Nextera XT Indexes (Illumina). The concentration of sequencing libraries was determined by using Qubit dsDNA HS Assay Kit (Life Technologies ...
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bioRxiv - Neuroscience 2023Quote: ... Library was sequenced on a NovaSeq 6000 instrument (Illumina) to a depth of 360 million reads with an estimated 45,000 reads per cell ...
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bioRxiv - Neuroscience 2023Quote: ... Sequencing was performed on an NovaSeq 6000 Sequencer (Illumina San Diego, California, USA) with a read length of 150 bp ...
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bioRxiv - Neuroscience 2023Quote: ... The cDNA libraries were synthesized using TruSeq Stranded Total RNA LT (Illumina®, CA, USA) from 200 ng of RNA ...
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bioRxiv - Cell Biology 2023Quote: ... Stranded libraries were prepared from 500 ng total RNA input with poly-A+ selection (TruSeq Stranded mRNA, Illumina). Final library size and concentration were assessed (Qubit ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were pooled together and sequenced on the NovaSeq 6000 (Illumina) platform using the 150-cycle SP Reagent Kit (800M reads ...
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bioRxiv - Cell Biology 2023Quote: ... and sequenced on a NextSeq 500 (Illumina) with a 5% spike-in of PhiX v3 (Illumina ...
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bioRxiv - Cell Biology 2023Quote: ... cDNA libraries were made with the Illumina TruSeq 2.0 (Illumina, CA) kit following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2023Quote: ... with a 5% spike-in of PhiX v3 (Illumina FC-110-3001).
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bioRxiv - Cell Biology 2023Quote: ... with a 5% spike-in of PhiX v3 (Illumina, FC-110-3001).
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bioRxiv - Cell Biology 2023Quote: ... and sequenced on a NextSeq 500 (Illumina) with a 5% spike-in of PhiX v3 (Illumina FC-110-3001).
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bioRxiv - Cell Biology 2023Quote: ... Samples were sequenced on a NextSeq 2000 (Illumina).
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bioRxiv - Immunology 2023Quote: ... FastQ files for each sample were obtained using bcl2fastq v2.20.0.422 software (Illumina). Sequencing reads were aligned to the mouse reference transcriptome (mm10 v90 ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were normalized for molarity and sequenced on a NovaSeq 6000 (Illumina) at 80-100 million reads ...
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bioRxiv - Neuroscience 2023Quote: ... and sequenced on a MiSeq sequencer (Illumina) with single read 65 cycles including 20% Phi X Sequencing Control DNA at the Genomics Core Laboratory at Weill Cornell Medicine ...