Labshake search
Citations for Illumina :
5501 - 5550 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2023Quote: ... The generated data were subsequently demultiplexed using sample-specific barcodes and changed into fastq files using bcl2fastq (Illumina; version 1.8.4). Reads were afterwards aligned to the human reference genome (GRCh38/hg38 ...
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bioRxiv - Plant Biology 2023Quote: ... where they were subsequently sequenced on a MiSeq instrument (v3 cell, paired-end 2 × 300 bp; Illumina, USA). The raw sequencing data is available from the European Nucleotide Archive (http://www.ebi.ac.uk/ena ...
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bioRxiv - Plant Biology 2023Quote: ... mRNA stranded nucleotide libraries were created by fusing TruSeq RNA sequencing adapters (Illumina), followed by library amplification by PCR ...
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bioRxiv - Plant Biology 2023Quote: ... libraries were prepared from 2 µg of total RNA using the TruSeq RNA Sample Prep Kit (Illumina, Cat # FC- 122-1001) and sequenced on the HiSeq 4000 to produce at least 18 million 50 bp single-end reads.
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bioRxiv - Plant Biology 2023Quote: ... ChIPed-DNA was used to generate sequencing libraries through the Illumina TruSeq kit (Illumina, cat # IP-202-1012, IP-202-1014) according to the manufacturer’s protocols ...
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bioRxiv - Plant Biology 2023Quote: ... The amplicons were sequenced on an lllumina MiSeq with 600 bp v3 reagents (Illumina, USA).
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bioRxiv - Plant Biology 2023Quote: ... and strand-specific sequencing was carried out on the Illumina HiSeq 2000 instrument (Illumina Inc., USA) at the Center for Genomic Research and Biocomputing ...
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bioRxiv - Physiology 2023Quote: RNA-seq libraries were prepared from total RNA using the TruSeq Stranded mRNA kit (Illumina, Inc., San Diego, CA, USA). Library size distribution was validated using an Agilent 4200 TapeStation (Agilent Technologies ...
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bioRxiv - Plant Biology 2023Quote: ... The extracted RNA was sent to Macrogen (Korea) for library preparation using the TruSeq stranded mRNA Library (Illumina, United States) and sequencing of 2 × 100 bp paired-end reads using the NovaSeq 6000 (Illumina ...
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bioRxiv - Plant Biology 2023Quote: Sequence libraries were prepared using a TruSeq Stranded mRNA Sample Prep Kit (Illumina, San Diego, CA, United States) and sequenced using Ilumina Hiseq 2500 with a single-end sequencing protocol ...
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bioRxiv - Plant Biology 2023Quote: ... Paired-end 125 bp sequencing was performed with multiplexed libraries on a Hiseq platform (Illumina, San Diego, CA, US). The sequences were de-multiplexed followed by trimming of low quality bases and adapters using Trimmomatic version 0.33 (Bolger et al. ...
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bioRxiv - Plant Biology 2023Quote: ... and then sequenced by Illumina NextSeq 550.
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bioRxiv - Plant Biology 2023Quote: FASTQ file generation from Illumina sequences was performed by CASAVA software v1.8.2 (Illumina Inc.) ...
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bioRxiv - Plant Biology 2023Quote: ... Illumina BCL files were demultiplexed and converted to fastq format with bcl2fastq v2.20.0 (Illumina). Quality of sequencing data was verified before and after trimming with fastQC v0.11.5 and MultiQC v1.5 24 ...
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bioRxiv - Molecular Biology 2023Quote: ... A 1.4 nM pool of each QC passed RNA-seq library was sequenced by running a Single Read (SR) 100bp NovaSeq 6000 S2 flow cell on the NovaSeq 6000 Sequencing System (Illumina, Inc.). The fastq files were obtained by demultiplexing the bcl basecall files using the 1.8.4 version bcl2fastq script (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... On an Illumina HiSeq 2000 system (Illumina, San Diego, CA; 16 samples/lane), all samples underwent an indexed paired-end sequencing run of 2 ×51 cycles ...
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bioRxiv - Microbiology 2023Quote: ... Equimolar amounts of these barcoded amplicon-sequencing libraries were pooled and sent to the University of British Columbia’s BRC-Seq Next-Gen Sequencing Core for sequencing using the MiSeq platform with 300-bp pair-end chemistry (Illumina).
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bioRxiv - Microbiology 2023Quote: ... Internal segments without read support were removed and replaced by gap filling informed by Illumina reads and using Illumina contigs that were identified by blastn ...
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bioRxiv - Microbiology 2023Quote: ... and next-generation sequencing (iSeq, Illumina).
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bioRxiv - Microbiology 2023Quote: ... and the whole genome was sequenced by Illumina HiSeq4000 ...
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bioRxiv - Microbiology 2023Quote: ... Eco Real-Time PCR System (Illumina), qTOWER3 G Real-Time System (Analytik Jena) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Illumina paired-end sequencing libraries were prepared using the Illumina TruSeq DNA (Illumina, CA) or NEBNext Ultra FS DNA library kits (paired-end 150bp reads ...
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bioRxiv - Neuroscience 2023Quote: ... 2.5 μL tagment DNA enzyme (Nextera, Illumina), 22.5 μL nuclease free water ...
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bioRxiv - Neuroscience 2023Quote: ... Full-length cDNA (150 pg) was processed using a Nextera XT DNA library preparation kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced in CRUK on a Novaseq 6000 sequencer (Illumina).
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bioRxiv - Neuroscience 2023Quote: ... Index was added using PCR with Nextera XT Index Kit (Illumina). We used MiSeq 300 cycle ver ...
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bioRxiv - Neuroscience 2023Quote: ... 2 (Illumina) for the sequencing.
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bioRxiv - Molecular Biology 2023Quote: ... The RNA-seq libraries were prepared starting from 200 ng of DNase-treated total RNA according to the Illumina TruSeq Stranded Total RNA protocol (Document # 1000000040499 v00, © 2021 Illumina, Inc.). The libraries qualities were assessed by running a 2100 Bioanalyzer DNA 1000 chip (Agilent Technologies ...
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Brain cell-specific origin of circulating microRNA biomarkers in experimental temporal lobe epilepsybioRxiv - Neuroscience 2023Quote: ... Small RNA libraries from plasma were prepared using the Illumina TruSeq Small RNA Library Prep Kit (Illumina, UK) with reagent volumes halved to account for lower concentrations of miRNA to prevent excessive formation of adapter dimers ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Libraries were made according to the manufacturer’s directions for the TruSeq Stranded mRNA Library Prep kit (48 Samples) (Illumina, Cat. No. 20020594), and TruSeq RNA Single Indexes Sets A and B (Illumina Cat ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and TruSeq RNA Single Indexes Sets A and B (Illumina Cat. No. 20020492 and 20020493). Resulting short fragment libraries were checked for quality and quantity using the Bioanalyzer (Agilent ...
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bioRxiv - Evolutionary Biology 2023Quote: ... 150bp sequencing libraries were prepared using the Illumina TruSeq RNA library kit by various companies listed in Table S7 and sequenced on Illumina HiSeq X platform (Illumina, CA).
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bioRxiv - Physiology 2023Quote: ... FASTQ files were prepared using bcl2fastq (Illumina) and then aligned to a reference genome using Cellranger v ...
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bioRxiv - Genetics 2023Quote: ... eligible libraries were sequenced on the Novaseq 6000 platform (Illumina) in a 150 bp paired-end manner ...
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bioRxiv - Microbiology 2023Quote: ... Single-ended sequencing was performed on single lane of a High Output Flowcell in an Illumina NextSeq 500 (Illumina) instrument.
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bioRxiv - Microbiology 2023Quote: ... The 16S rRNA gene libraries were then sequenced on a NovaSeq 6000 instrument with a SP flow cell (2 × 250 bp) (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... Reverse stranded cDNA library preparation was performed with the TruSeq® Stranded Total RNA Sample Preparation Kit (Illumina, San Diego ...
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bioRxiv - Microbiology 2023Quote: ... and sequenced using HiSeq 2000 sequencing with 2 × 150 bp paired-end chemistry (Illumina). On average ...
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bioRxiv - Bioengineering 2023Quote: ... and then RNA-seq libraries were constructed using the TruSeq Stranded Total RNA Gold (Illumina, RS-122-2303). The qualities of RNA-seq libraries were verified using the Tape Station D1000 assay (Tape Station 2200 ...
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bioRxiv - Pathology 2023Quote: ... cDNA libraries were sequenced by NovaSeq 6000 (Illumina) in a paired-end fashion to reach more than 1.5M reads ...
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bioRxiv - Developmental Biology 2023Quote: ... then labeled and hybridized using the Infinium Methylation EPIC BeadChip Kit (Illumina) following standard protocol of each manufacturer ...
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bioRxiv - Developmental Biology 2023Quote: ... HMW genomic DNA was sequenced to ∼30x coverage on a NovaSeq 6000 (Illumina), following library preparation on the 10X Genomics Linked-Read platform at the Center for Genome Innovation ...
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bioRxiv - Developmental Biology 2023Quote: ... libraries were prepared using the Illumina stranded mRNA Kit and 100bp paired-ends reads were sequenced to an average depth pf 40 million reads/replicate on the NovaSeq 6000 (Illumina, San Diego, CA).
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bioRxiv - Plant Biology 2023Quote: ... and sequencing was performed using MiSeq 2 × 250 cycle paired-end (Illumina) with the Nano Kits v3 reagent ...
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bioRxiv - Plant Biology 2023Quote: ... and 470 bp and 800 bp for PI 537277 were prepared using the Genomic DNA Sample Prep kit (Illumina, San Diego, CA). Four mate-pair libraries with insert sizes of 5 ...
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bioRxiv - Plant Biology 2023Quote: ... and sequenced on an HiSeq3000 instrument (Illumina, CA, USA) with 150 bp single-end reads ...
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bioRxiv - Physiology 2023Quote: ... The pooled libraries were sequenced using an Illumina HiSeq4000 instrument (Illumina, San Diego, CA).
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bioRxiv - Molecular Biology 2023Quote: Single-end sequencing (50 nt) of the libraries was performed on a NovaSeq 6000 system (Illumina).
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bioRxiv - Molecular Biology 2023Quote: Libraries were prepared from the rRNA-depleted or Terminator-digested RNAs using the TruSeq Stranded mRNA Sample Preparation Kit (Illumina) and the IDT for Illumina – TruSeq RNA UD indexes (Illumina) ...
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bioRxiv - Molecular Biology 2023Quote: ... and the IDT for Illumina – TruSeq RNA UD indexes (Illumina). Paired-end sequencing (2 x 50 nt ...