Labshake search
Citations for Illumina :
3851 - 3900 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... Library preparation for VLP genomic DNA involved using >25ng input DNA with the Nextera DNA Flex Library Preparation Kit (currently named Illumina DNA prep, Illumina, CA, USA). Deviating from the Illumina protocol’s full reaction volume (50 µL) ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation for VLP genomic DNA involved using >25ng input DNA with the Nextera DNA Flex Library Preparation Kit (currently named Illumina DNA prep, Illumina, CA, USA). Deviating from the Illumina protocol’s full reaction volume (50 µL) ...
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bioRxiv - Microbiology 2023Quote: ... 220 ng of total RNA was used to prepare libraries for sequencing using an Illumina TruSeq Stranded mRNA Library Prep kit (Illumina, 20020594) and SuperScript II Reverse Transcriptase (Invitrogen ...
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bioRxiv - Microbiology 2023Quote: ... using the Illumina DNA Prep kit and unique dual indexes (Illumina Nextera Index kit) at 1:4 scale reaction volume ...
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bioRxiv - Microbiology 2023Quote: ... Samples were multiplexed and run on a MiSeq (Illumina) using a 600 cycle v3 reagent kit and flow cell.
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bioRxiv - Microbiology 2023Quote: ... and short read sequencing (Illumina) methods which resulted in a single contiguous chromosome of BHN418 of length 2,107,426 bp ...
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bioRxiv - Microbiology 2023Quote: ... and paired-end sequencing was conducted using the HiSeq2000 system (Illumina). Sequencing reads from each RNA sample underwent quality filtering and trimming ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing was carried out on the NovaSeq6000 platform (Illumina, San Diego, CA, USA) following a 2×250 bp approach and using the primer pair 515f (5′-GTGCCAGCMGCCGCGGTAA-3′ ...
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bioRxiv - Microbiology 2023Quote: ... Illumina shotgun libraries were prepared using the Nextera XT DNA Sample Preparation Kit and subsequently sequenced on a MiSeq system with the reagent kit v3 with 600 cycles (Illumina, San Diego, CA, USA) as recommended by the manufacturer ...
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bioRxiv - Microbiology 2023Quote: ... After pooling the samples together in equimolar concentrations in resuspension buffer (Illumina), the MiniSeq denaturation protocol A (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... Demultiplexing and trimming of the reads was performed using the Local Run Manager (Illumina).
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bioRxiv - Microbiology 2023Quote: ... the MiniSeq denaturation protocol A (Illumina) was followed ...
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bioRxiv - Microbiology 2023Quote: ... The cDNA libraries were then fragmented and amplified for sequencing using the Illumina Nextera XT DNA Library Preparation kit (Illumina, FC-131-1096) using custom primers that enabled the specific amplification of only the 3’ ends ...
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bioRxiv - Microbiology 2023Quote: ... and then sequenced on a NextSeq550 system using High output 75 cycle kits (Illumina) at an average of 20,000 reads per cell ...
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bioRxiv - Microbiology 2023Quote: ... PhiX genomic adapter-ligated DNA control library (Illumina) was included at 5% of the total DNA ...
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bioRxiv - Microbiology 2023Quote: ... Libraries for the run at NMBU and the first run at SLU (August 2021) were prepared using the Nextera XT DNA Library Preparation kit (Illumina, San Diego, CA, USA) and paired-end 250 bp sequenced on an Illumina MiSeq ...
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bioRxiv - Microbiology 2023Quote: ... Library preparations were carried out by Novogene (Beijing, China) using a TruSeq Stranded mRNA kit (Illumina, San Diego, CA, USA), as per manufacturer’s protocol ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were further reverse-transcribed and paired-end sequenced on NovaSeq6000 (Illumina). Final reads were mapped to reference genome (GRCm38 ...
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bioRxiv - Molecular Biology 2023Quote: ... Illumina sequencing was performed on an Illumina/Hiseq-2500 platform (Illumina, San Diego, CA, USA) to generate 100 bp paired-end reads with a read depth of 50 million reads ...
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bioRxiv - Molecular Biology 2023Quote: ... The resulting cDNA was sent for DNAseq at Genomics Core facility at Virginia Commonwealth University (VCU) and sequenced using NextSeq2000 Sequencer (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... A first step of ribosomal RNA depletion was performed using the RiboZero Gold kit (Illumina). After fragmentation ...
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bioRxiv - Immunology 2023Quote: ... Libraries were then prepared for sequencing with NovaSeq 600 Reagent Kits (Illumina; 20028400) and sequenced on Illumina NovaSeq 6000 (Ilumina ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were constructed using the Nextera XT Library Prep Kit (Illumina, San Diego, CA, USA), normalized and denatured for loading in a NextSeq 500/550 Mid Output v2.5 Kit (300 cycles ...
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bioRxiv - Microbiology 2023Quote: ... Nextera indices were added to purified DNA fragments per the manufacturer’s protocol (Illumina, San Diego, CA). The indexed fragments were purified using AMPure XP Beads according to the manufacturer’s protocol (Beckman Coulter ...
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bioRxiv - Neuroscience 2023Quote: ... with dual indexing (read length 50bp) using a NovaSeq 6000 (Illumina, San Diego, CA, USA). All samples were processed on the same flow cell ...
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bioRxiv - Pharmacology and Toxicology 2023Quote: ... Then the libraries were constructed using TruSeq Stranded mRNA LT Sample Prep Kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions and sequenced on an Illumina HiSeq X Ten platform and 150 bp paired-end reads were generated ...
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bioRxiv - Neuroscience 2023Quote: ... All samples were sequenced on Illumina HiSeq 4000 using HiSeq 3000/4000 SBS Kit reagents (Illumina), targeting 30 million read pairs per sample ...
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bioRxiv - Neuroscience 2023Quote: RNA-Sequencing Assay Library Preparation Sequencing libraries were constructed using TruSeq DNA V2 (Illumina, San Diego, CA) sample prep kits and quantified using qPCR (Kapa Biosystems ...
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bioRxiv - Microbiology 2023Quote: ... Pooled DNA libraries were sequenced by Novogene Co. using HiSeq 4000 (A. baumannii clones) or HiSeq X10 (all other samples) instruments (Illumina) with paired-end 150-bp read length.
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bioRxiv - Microbiology 2023Quote: ... by the manufacturer’s protocol (DNA input ≥100 ng) but using TruSeq DNA PCR-free CD index 20015949 (Illumina) adapters to eliminate PCR amplification ...
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bioRxiv - Plant Biology 2023Quote: ... value of 8 was employed for RNA-Seq library construction using the TruSeq Stranded Total RNA Library Prep Plant kit (Illumina). Hisat2 (Kim et al. ...
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bioRxiv - Plant Biology 2023Quote: ... Sequencing was performed using NextSeq 500 and MiSeq sequencers (Illumina) following the manufacturers’ protocols.
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bioRxiv - Plant Biology 2023Quote: ... and Illumina TruSeq adapters (Illumina) were ligated to the fragments (molar ratio 29:1:1 ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were pooled for sequencing on a NextSeq500 instrument (Illumina) targeting 30M ...
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bioRxiv - Cell Biology 2023Quote: ... RNA library was prepared with TruSeq Stranded Total RNA (Degraded RNA) v2 RNA Exome Library and TS RNA Access capture protocol (Illumina), and RNA expression passing quality control was quantified with Salmon and normalized in log-normalized counts before ssGSEA calculation ...
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bioRxiv - Cell Biology 2023Quote: ... The sequencing was performed on a NovaSeq 6000 (Illumina, San Diego, CA, USA) operated by the Rhelixa Corporation (Tokyo ...
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bioRxiv - Cell Biology 2023Quote: ... and Nextera® XT Index Kit (96 indexes, 384 samples) (Illumina, FC-131-1002) according to the manufacturer protocol (with 2.5 x volume reduction in all reactions) ...
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bioRxiv - Cell Biology 2023Quote: Tagmentation and indexed library amplification were done with Nextera® XT DNA Library Preparation Kit (Illumina, FC-131-1096) and Nextera® XT Index Kit (96 indexes ...
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bioRxiv - Evolutionary Biology 2023Quote: We removed low-quality bases (Phred score below 25) and adaptors from Illumina reads ...
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bioRxiv - Evolutionary Biology 2023Quote: ... insert size 550 nt) were constructed from 1.8-2 µg gDNA with the TruSeq DNA PCR-Free kit (Illumina, San Diego, CA) and sequenced on the Illumina HiSeq 2500 by the Genomics Core Facility at Pennsylvania State University ...
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bioRxiv - Evolutionary Biology 2023Quote: The sequenced reads were demultiplexed with default settings using Bcl2fastq v2.19 (Illumina®, 2019) and trimmed with Trimmomatic v0.36 (Bolger et al. ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing of the libraries was performed on a NextSeq 500 system (Illumina, San Diego Ca, USA) in mid-output mode ...
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bioRxiv - Genetics 2023Quote: ... Individual libraries were pooled 30-plex at equimolar concentrations and sequenced on one lane of an Illumina HiSeq 2500 (Illumina, Inc, San Diego, CA) employing a paired-end ...
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bioRxiv - Genomics 2023Quote: ... We also sequenced RNA by Illumina Platform (PE150) ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed on the NextSeq500 instrument (Illumina) using v2 chemistry with 1x75bp single end setup ...
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bioRxiv - Molecular Biology 2023Quote: ... Next generation sequencing was performed on NextSeq 2000 (Illumina). 2-5 million 50 bp paired-end reads were expected for each MTAC sample ...
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bioRxiv - Molecular Biology 2023Quote: Amplified libraries were sequenced on a HiSeq2500 (Illumina) with a read length of 65 bp (single-end read) ...
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bioRxiv - Molecular Biology 2023Quote: ... as each clock was developed from a different pool of CpGs (e.g. the pan-tissue clock was developed from a pool of ∼21,000 CpGs common to all Illumina HumanMethylation arrays ...
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bioRxiv - Molecular Biology 2023Quote: ... Both cDNA and MULTI-seq-barcode libraries were sequenced with NextSeq500 (Illumina). We read 8 base pairs (bp ...
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bioRxiv - Molecular Biology 2023Quote: ... The pooled libraries were loaded at 300pM onto a NovaSeq 6000 (Illumina) machine and sequenced on the S4 flowcell using the following set-up ...