Labshake search
Citations for Illumina :
3801 - 3850 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Bioengineering 2023Quote: ... RNA sequencing libraries were made using the TruSeq Stranded mRNA kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Bioengineering 2023Quote: ... RNA-seq libraries were pooled and sequenced via paired end 150 bp reads using Genewiz’s sequencing only service (HiSeq or Novaseq 6000) at a target depth of 25M reads per library (Illumina). RNA-seq was attempted on all cytokine samples ...
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bioRxiv - Cell Biology 2023Quote: ... The nuclear pellet was resuspended in transposition reaction mix using the Tagment DNA Enzyme and Buffer Kit (Illumina) as per manufacturer protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced on the NovaSeq 6000 instrument (Illumina) (150bp ...
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bioRxiv - Cancer Biology 2023Quote: ... 4) tagmentation was performed with 2ng input and sequencing library generated using the Nextera XT library prep kit (Illumina, #FC-131-1024). In short ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced on the Novaseq 6000 (Illumina). Read alignment to the GRCh38 human reference genome ...
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bioRxiv - Cancer Biology 2023Quote: ... then sequenced on the NovaSeq 6000 instrument (Illumina) (150bp ...
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bioRxiv - Microbiology 2023Quote: The libraries were prepared with the Illumina Nextera Flex library kit (Illumina) with unique dual indices (UDI ...
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bioRxiv - Immunology 2023Quote: ... according to the protocol for Miseq Reagent Kit v3 (Illumina).
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bioRxiv - Genomics 2023Quote: The base call files from Illumina were demultiplexed and converted to FASTQ files using bcl2fastq (v2.20.0.422 ...
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bioRxiv - Genomics 2023Quote: ... and ligated to PE adaptors (Illumina). The Hi-C library was amplified using PE primers (Illumina ...
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bioRxiv - Genomics 2023Quote: ... The library was sequenced using a HiSeq3000 (Illumina, California, USA), generating 150 bp paired-end reads.
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bioRxiv - Genomics 2023Quote: ... was sequenced using a combination of Illumina HiSeq (Dovetail Genomics & Edinburgh Genomics) and Pacific BioSciences approaches (Dovetail Genomics & Edinburgh Genomics) to a final sequencing coverage of 75× (Illumina) and 60× (PacBio) ...
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bioRxiv - Plant Biology 2023Quote: ... using TruSeq SBS Kit v3 (cBot-HS) (Illumina, user guide; Part#15023333 Rev. B). The prepared libraries were enriched using 15 cycles of PCR and purified by the QIAquick PCR purification kit (Qiagen) ...
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bioRxiv - Genomics 2023Quote: ... Bulk ATAC-seq libraries were sequenced on HiSeqTM 2500 (Illumina®) as 50bp paired-end reads.
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bioRxiv - Genomics 2023Quote: ... VCFs from Illumina sequencing were combined with CombineGVCFs ...
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bioRxiv - Genomics 2023Quote: ... and sequenced on a Novaseq6000 instrument (Illumina) to an average depth of 50,000 reads per cell ...
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bioRxiv - Genomics 2023Quote: ... we linked them back to their donor-of-origin genotype (obtained using Illumina Global Array) using vireoSNP v0.5.8 with default parameters (n_donor = 2) ...
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bioRxiv - Genomics 2023Quote: Samples were sequenced on HiSeq 4000 (Illumina) using a 2x76 paired-end sequencing ...
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bioRxiv - Genomics 2023Quote: ... Illumina libraries were constructed using the TruSeq Stranded Total RNA with Ribo-Zero Globin (Illumina). Finally ...
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Multi-omics analysis reveals signatures of selection and loci associated with complex traits in pigsbioRxiv - Genomics 2023Quote: ... and 150 bp pair-end sequencing of each sample was performed on the Illumina Novaseq 6000 platform (Illumina, CA, USA).
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bioRxiv - Genetics 2023Quote: ... Raw sequence data (BCL files) generated from Illumina HiSeq was converted into Fastq files and demultiplexed using Illumina’s bcl2fastq 2.17 software ...
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bioRxiv - Genetics 2023Quote: ... with Index Primers from Illumina (IDT for Illumina DNA/RNA UD Indexes Set A (Illumina ...
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bioRxiv - Genetics 2023Quote: ... A nested PCR approach was used where a larger section of the U6 region was amplified and then performed PCR1 with DeepSeq primers (primers with a complimentary Illumina sequence for i7 and i5 sequencing primer attachment ...
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bioRxiv - Genetics 2023Quote: ... Paired-end libraries with insert sizes ranging from 300 to 500 bp were generated using the NEXTflex PCR-Free DNA Sequencing Kit (Biooscientific) or the TruSeq Nano DNA Library Prep Kit (Illumina). Libraries were quantified using the KAPA Library Quantification Kit (Cliniscience) ...
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bioRxiv - Molecular Biology 2023Quote: ... using HiSeq SBS Kit v4 (Illumina) (Fasteris ...
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bioRxiv - Neuroscience 2023Quote: ... Female samples after MR2 were sequenced (single-end reads, 1×50 nt) with Illumina NextSeq 2000 (Illumina, San Diego, USA). Quality checks and sequencing were performed by StarSEQ GmbH (Mainz ...
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bioRxiv - Neuroscience 2023Quote: ... The reference genome and annotation were both obtained from Illumina’s iGenome database (https://support.illumina.com/sequencing/sequencing_software/igenome.html) ...
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bioRxiv - Neuroscience 2023Quote: ... The libraries generated were then run on the NextSeq 550 (WT vs Pompe microglia datasets) or the NovaSeq 6000 (GILT vs GAAco datasets) Sequencing System (Illumina) using either the using NextSeq 500/550 High Output v2.5 (150 cycles ...
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bioRxiv - Systems Biology 2023Quote: ... the cDNA was amplified followed by Illumina sequencing index addition as we previously described33 ...
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bioRxiv - Systems Biology 2023Quote: ... Thawed total RNA was depleted from rRNA using the Ribo-Zero rRNA Removal Kit for Gram-Negative Bacteria (Illumina) according to the protocol ...
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bioRxiv - Synthetic Biology 2023Quote: ... Raw sequence data (.bcl files) generated from Illumina HiSeq was converted into fastq files and de-multiplexed using Illumina bcl2fastq2.17 ...
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bioRxiv - Microbiology 2023Quote: ... The sequencing of V4 region of the 16S rRNA gene was amplified following the EMP protocol and sequences were obtained by Illumina MiSeq at the Argonne Sequencing Center ...
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bioRxiv - Microbiology 2023Quote: ... and the TruSeqStranded mRNA library prep kit (Illumina Inc), following the Ribo-Zero rRNA Removal kit Reference guide and the “TruSeqStranded mRNA Sample Preparation Guide ...
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bioRxiv - Microbiology 2023Quote: ... The cDNA libraries were quantified by qPCR followed by sequencing in a NextSeq2000 equipment (Illumina).
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bioRxiv - Immunology 2023Quote: ... which was performed on a MiSeq instrument with paired-end 2×300 bp reads using the NovaSeq 6000 SP Reagent Kit v1.5 (500 cycles) (Illumina, San Diego, California, USA). The protocol was approved by the ethics committee of Liège University Hospital (approval numbers 2021-54 and 2020/107).
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bioRxiv - Immunology 2023Quote: ... and Nextera XT Index Kit v2 Set A (Illumina, Cat. No. FC-131-2001). Sequencing was performed on an Illumina NextSeq 500 sequencer to generate 2 × 76 paired end reads using NextSeq 500/550 High Output kit v2.5 (150 cycles ...
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bioRxiv - Immunology 2023Quote: ... We observed less than 4% barcode swapping between the two barcodes (more than 96% of the Illumina sequencing reads contained correct endodomain and barcode pairs) ...
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bioRxiv - Systems Biology 2023Quote: ... The TruSeq Stranded mRNA Kit (Illumina, San Diego, CA, USA) was used to generate complementary DNA (cDNA ...
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bioRxiv - Developmental Biology 2023Quote: ... Libraries were prepared from 100-400 pg of cDNA using Nextera XT Kit (Illumina), as per the manufacturer’s instructions but with one-fifth volumes for each sample.
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bioRxiv - Systems Biology 2023Quote: ... The resulting sequences were uploaded to Illumina Sequence Hub and downloaded using BaseSpace Sequence Hub Downloader (Illumina).
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bioRxiv - Systems Biology 2023Quote: ... the final library was diluted to 20 nM with HT1 buffer and PhiX control v3 (20%, v/v) and 600 µL was loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina). The resulting sequences were uploaded to Illumina Sequence Hub and downloaded using BaseSpace Sequence Hub Downloader (Illumina).
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bioRxiv - Immunology 2023Quote: ... 200 pg of purified WTA products from each pool were subjected for library construction with custom designed New-P5-SMART-PCR primer using the Nextera XT DNA library preparation kit (Illumina) following the detailed protocol provided by the manufacture ...
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bioRxiv - Immunology 2023Quote: ... raw binary base call (BCL) files were converted to FASTQ files using bcl2fastq (Illumina). All FASTQ files were processed using the nf-core/RNA-seq pipeline (55 ...
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bioRxiv - Immunology 2023Quote: ... The libraries were subsequently sequenced on a Novaseq S4 sequencer (Illumina) to generate fastqs with the following mean reads per cell ...
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bioRxiv - Microbiology 2023Quote: ... and sequencing was performed with the NextSeq 500 system (Illumina), generating 150 bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... and subjected to Illumina MiSeq 2 × 150 bp paired-end sequencing by Illumina MiSeq.
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bioRxiv - Immunology 2023Quote: ... Libraries were prepared using a TruSeq® Stranded mRNA Library Prep (48 Samples) Kit (Illumina). Library preparation ...
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bioRxiv - Microbiology 2023Quote: ... Samples were sequenced with the Illumina MiniSeq device using the Illumina MiniSeq Mid output 300 cycles kit (2×150 bp, paired-end, Illumina). Demultiplexing and trimming of the reads was performed using the Local Run Manager (Illumina).
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bioRxiv - Microbiology 2023Quote: ... double-sided cleaned tagged libraries were sequenced on NovaSeq 6000 (Illumina, CA, USA) using a 2 × 250 bp paired end sequencing run ...