Labshake search
Citations for Illumina :
3201 - 3250 of 3798 citations for Probable U3 small nucleolar RNA associated protein 11 UTP11 Antibody FITC since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2020Quote: ... Directional poly-A RNA sequencing libraries were prepared and sequenced as 42-bp paired-end reads on an Illumina NextSeq 500 instrument (Illumina) to a depth of 33.2 – 48.0 x 106 read pairs (Active Motif) ...
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Nonsense Mediated RNA Decay Is a Unique Vulnerability of Cancer Cells with SF3B1 and U2AF1 MutationsbioRxiv - Cell Biology 2021Quote: ... RNA-sequencing libraries were then prepared from RNA isolated from the bulk mutant AML bone marrow cells and the normal CD34+ bone marrow cells using TruSeq Stranded Total RNA kit (Illumina) described above ...
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bioRxiv - Cell Biology 2021Quote: ... and then depleted of rRNAs and processed for RNA-Seq library construction using a TruSeq Stranded mRNA Library Prep Kit (Illumina). RNA-Seq data were acquired on an Illumina Hiseq 4000 sequencer ...
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bioRxiv - Physiology 2021Quote: ... Single-indexed strand-specific cDNA library from total RNA samples (500 ng input with RIN ≥ 5) was prepared using TruSeq Stranded mRNA Library Prep Kit (Illumina) as per directions by the manufacturer ...
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bioRxiv - Physiology 2021Quote: ... Poly-A enriched complementary DNA (cDNA) libraries were constructed using the TruSeq RNA Sample Preparation Kit (Illumina; San Diego, USA). Briefly ...
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bioRxiv - Microbiology 2021Quote: ... 1.5 μg of purified RNA for each sample was processed using the Ribozero rRNA Removal Kit (Gram-negative bacteria) (Illumina) according to the manufacturer’s instructions except that reaction volumes were reduced by 50% ...
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bioRxiv - Genomics 2021Quote: ... sequencing libraries from each extraction were prepared using the DNA Prep kit and indexed using DNA/RNA UD indexes (Illumina), and subsequently subjected to paired-end sequencing on either an Illumina MiSeq® or NextSeq 2000® instrument ...
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bioRxiv - Cell Biology 2020Quote: ... RNA-seq libraries were prepared using the Illumina TruSeq stranded mRNA library preparation kit and sequenced on HiSeq4000 sequencer (Illumina). RNA-seq data were aligned to the mm9 reference genome using STAR 2.3.0e61 ...
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bioRxiv - Evolutionary Biology 2021Quote: ... except for two adult gibbosus and tuberosus males for which the non-strand-specific TruSeq Total RNA with Ribo-Zero kit (Illumina) was used ...
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bioRxiv - Microbiology 2021Quote: ... cDNA library was prepared by using NEB Next Ultra RNA Library Prep Kit for Illumina (New England Biolab, Cat# E7530) and whole genome sequencing was performed by Miseq (Illumina).
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bioRxiv - Cancer Biology 2021Quote: ... sequencing of samples for which RNA of sufficient quality and quantity was available was performed on a NextSeq 500 instrument (Illumina) as previously described 17 ...
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Enhancer Remodeling Promotes Tumor-Initiating Activity in NRF2-Activated Non-Small Cell Lung CancersbioRxiv - Cancer Biology 2020Quote: ... 4 μg of total RNA from A549 cells was subjected to rRNA removal using the Ribo-Zero Gold kit (Illumina). cDNA sequencing libraries were then prepared using the SureSelect Strand-Specific RNA library preparation kit (Agilent Technologies ...
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bioRxiv - Neuroscience 2021Quote: ... We fragmented the rRNA-depleted RNA samples and processed them into strand-specific cDNA libraries using TruSeq Stranded Total LT Sample Prep Kit (Illumina) and then sequenced them on NextSeq 500 ...
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A tale of two transcriptomic responses in agricultural pests via host defenses and viral replicationbioRxiv - Genomics 2020Quote: ... The rRNA-depleted samples were used for TruSeq Stranded RNA Sample Prep kit to produce 5′ to 3′ strand-specific cDNA libraries (Illumina). A TruSeq SBS sequencing kit version 3 (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... Ribo Zero Gold was then used to deplete ribosomal RNAs (2 reactions were used, and the 50°C step was omitted, Illumina). RNA was then purified using Oligo Clean & Concentration kit ...
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bioRxiv - Developmental Biology 2021Quote: ... The libraries were prepared from 300 ng of RNA from each sample using TruSeq Stranded mRNA HT Kit and TruSeq Stranded mRNA Sample Preparation protocol 15031047 (Illumina). Sequencing was performed with NovaSeq 6000 SP Sequencing System (Illumina ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Sequencing libraries were prepared by LC Sciences following Illumina’s TruSeq-stranded-total-RNA-sample preparation protocol (Illumina, San Diego, USA). Quality control analysis and quantification of the sequencing library were performed using Agilent Technologies 2100 Bioanalyzer High Sensitivity DNA Chip ...
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bioRxiv - Genomics 2021Quote: ... RNA sample preparations were performed as described previously [22] using the ARTseq™ and Epicentre’s Ribo-Zero™ kits (Illumina). Briefly ...
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bioRxiv - Immunology 2020Quote: ... RNA-seq libraries were prepared from both eluate and 10% input mRNA using the TruSeq mRNA library prep kit (Illumina), subjected to quality control (MultiQC) ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were prepared using 1 µg of RNA with TruSeq® stranded mRNA Preparation Kit (Illumina, San Diego, CA, USA) followed by sequencing with a Novaseq 6000 sequencer using 150 base read lengths in paired-end mode (Illumina ...
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bioRxiv - Microbiology 2020Quote: ... paired-end cDNA libraries were prepared from 10 μg of total RNA following poly-A purification using the TruSeq Stranded mRNA kit (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Microbiology 2021Quote: ... Total 5 μg of RNA was used for rRNA depletion by using Ribo-Zero™ (Epicentre, Illumina, Madison, WI USA) kit and purified by using Qiagen-RNeasy miniElute (Qiagen GmbH ...
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bioRxiv - Immunology 2020Quote: ... High-quality RNA (approximately 500 ng; RIN 8) was used for nondirectional paired-end mRNA library preparation (TruSeq Sample Preparation Kit; Illumina).
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bioRxiv - Immunology 2021Quote: ... paired-end libraries were prepared from total RNA by ribosomal depletion using the Yeast Ribo-Zero rRNA Removal Kit (Illumina) and then using the TruSeq Stranded total RNA-Seq kit (Illumina ...
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bioRxiv - Immunology 2021Quote: ... PolyA RNA selected RNA Libraries were generated by the LMS Core Genomics Facility using the TruSeq Stranded mRNA Library Prep Kit (Illumina). Paired-ended sequencing was performed on an Illumina HiSeq 2500 sequencer ...
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bioRxiv - Molecular Biology 2021Quote: ... Sequencing libraries were generated using the TruSeq Stranded Total RNA with Ribo-Zero Human/ Mouse/Rat Low-throughput (LT) kit (Illumina) and run on a NextSeq 500 for paired-end sequencing using the NextSeq 500/550 High Output v2 Kit ...
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Glycogen Synthase Kinase 3 regulates the genesis of the rare displaced ganglion cell retinal subtypebioRxiv - Neuroscience 2021Quote: ... Stranded RNA-Seq libraries were constructed from 100 ng high-quality total RNA (RIN > 8) using the TruSeq Stranded mRNA Library Preparation Kit (Illumina). Paired-end sequencing of 40 bases length was performed on a NextSeq 500 system (Illumina) ...
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bioRxiv - Genomics 2021Quote: ... 200 ng of total RNA was used to construct a TruSeq strand specific library with the Ribo-Zero protocol (Illumina), and all samples were sequenced on a HiSeq2000v3 to a minimal target of 180 million paired-end reads ...
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bioRxiv - Genomics 2021Quote: ... Library preparation was performed over two batches using the Illumina TruSeq RNA Sample Preparation Kit v2 (RS-122-2001 & -2002, Illumina). Samples were sequenced to 50 base pairs ...
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bioRxiv - Genomics 2021Quote: Ribosomal RNA depleted strand-specific RNA libraries were generated with the TruSeq Stranded Total RNA sample preparation kit with Ribo-Zero Gold (#RS-122-2301and #RS-122-2302, Illumina) and transcriptome capture based libraries were generated with the TruSeq RNA Access Library Prep Kit (#RS-301-2001 ...
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bioRxiv - Neuroscience 2021Quote: ... 100 ng RNA of input and elutes after RIP were used to generate the library using the TruSeq Stranded RNA Sample Preparation Kit (Illumina) and sequenced on the Illumina HiSeq 3000 platform (Jingneng ...
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bioRxiv - Microbiology 2022Quote: Illumina library preparation of mRNA samples for RNA-Seq was prepared using a TruSeq Stranded mRNA library prep kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2023Quote: ... We fragmented the rRNA-depleted RNA samples and processed them into strand-specific cDNA libraries using TruSeq Stranded Total LT Sample Prep Kit (Illumina) and then sequenced them on NextSeq 500 ...
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bioRxiv - Cancer Biology 2022Quote: ... Illumina sequencing libraries were generated with the KAPA Biosystems Stranded RNA-Seq Kit[58] and sequenced using HiSeq 2000 (Illumina) with 100bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... Ribosomal RNA was depleted using the Ribo Zero kit and samples were converted into Illumina sequencing libraries using the ScriptSeq v2 RNA-Seq Library Preparation Kit (Epicentre, Illumina). Libraries were sequenced using Illumina HiSeq (2 × 150 bp reads) ...
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bioRxiv - Microbiology 2023Quote: ... Ribosomal RNA was depleted using the RiboZero rRNA Removal Kits for Gram-positive bacteria and/or for human/mouse/rat (Illumina). 300 bp-insert RNA-seq Illumina libraries were constructed using ∼1.0 μg of enriched mRNA that was fragmented then used for synthesis of strand-specific cDNA using the NEBnext Ultra Directional RNA Library Prep Kit (NEB-E7420L) ...
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bioRxiv - Neuroscience 2023Quote: ... 100 ng of total BH RNA with and without RNase R treatment was then used to construct cDNA libraries by Illumina Stranded Total RNA Prep Ligation with Ribo-Zero Plus (Illumina 20072063) ...
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bioRxiv - Neuroscience 2023Quote: ... performed paired-end next-generation RNA sequencing with a depth of 60 million reads per sample on the NovaSeq platform (Illumina) at the University of Michigan Advanced Genomics Core ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries for RNA-seq were then prepared using the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA was alcohol precipitated using sodium acetate and glycogen following the protocol from the Ribo-Zero rRNA Removal Kit (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... one μg of RNA (RIN>8) was used for library preparation with the Illumina Stranded total RNA Prep Ligation with Ribo-Zero Plus kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2023Quote: ... using a TruSeqTM Stranded Total RNA Library Prep Kit with a Ribo-ZeroTM kit and NovaSeq6000 paired-end sequencing (Illumina). The sequencing reads were aggregated into an rRNA reference (Mouse_rRNA_Reference_BK000964 ...
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bioRxiv - Cell Biology 2023Quote: ... Input and RNA eluted from m6A-IP were used to generate the library using TruSeq stranded mRNA sample preparation kit (Illumina). All sequencing was performed on an Illumina HiSeq 6000 according to the manufacturer’s instructions.
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bioRxiv - Bioengineering 2023Quote: ... For 4-week and 8-week organoids cDNA library was prepared by using the whole transcriptome Illumina TruSeq Stranded Total RNA Library Prep Kit Gold (Illumina), followed by evaluation on an Agilent 2100 Bioanalyzer by using the DNA 1000 kit ...
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bioRxiv - Genomics 2023Quote: ... 96 libraries from 16 animals in batch 1 were performed using TruSeq RNA Library Preparation Kit v2 (RS-122-2001, RS-122-2002, Illumina) and were sequenced 50 base pairs ...
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bioRxiv - Genomics 2023Quote: Total RNA was extracted from the collected leaf samples using the Dynabeads mRNA DIRECT Kit (Illumina, San Diego, CA, USA) and quantified and assessed for integrity using a NanoDrop spectrophotometer and an Agilent Bioanalyzer ...
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bioRxiv - Molecular Biology 2023Quote: ... Samples were then depleted of rRNA and converted to cDNA libraries using the TrueSeq® Stranded Total RNA kit (Illumina). cDNA libraries were sequenced with the HiSeq 4000 Sequencing System (Illumina ...
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bioRxiv - Plant Biology 2023Quote: ... The extracted RNA was sent to Macrogen (Korea) for library preparation using the TruSeq stranded mRNA Library (Illumina, United States) and sequencing of 2 × 100 bp paired-end reads using the NovaSeq 6000 (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: Libraries were prepared from the rRNA-depleted or Terminator-digested RNAs using the TruSeq Stranded mRNA Sample Preparation Kit (Illumina) and the IDT for Illumina – TruSeq RNA UD indexes (Illumina) ...
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bioRxiv - Physiology 2023Quote: ... using a TruSeqTM Stranded Total RNA Library Prep Kit with a Ribo-ZeroTM kit and NovaSeq6000 paired-end sequencing (Illumina). The sequencing reads were aggregated into an rRNA reference (Mouse_rRNA_Reference_BK000964 ...