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Citations for Illumina :
1151 - 1200 of 1646 citations for 5 Bromo 2 Tert Butyldimethylsilyl 4 Methylthiazole since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Systems Biology 2021Quote: ... Concentration of each sample in the pooled libraries were determined using the paired-end 300-cycle MiSeq Reagent Nano Kit v2 (2 × 150 bp) on a MiSeq instrument (both Illumina). NGS was performed on a final adjusted library pool using the paired-end 300-cycle NovaSeq 6000 S2 XP Reagent Kit (2 × 150 bp ...
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bioRxiv - Cell Biology 2021Quote: ... was performed by incubating beads with tagmentation buffer (12.5 µl 2 x TD buffer, 11.5 µl nuclease free water, 1µl Tn5 enzyme (Illumina #FC-131-1024)) at 37°C for 10min ...
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bioRxiv - Cell Biology 2021Quote: ... Libraries were prepared by Poly A selection from total RNA and sequenced using HiSeq 2 x 150 bp sequencing (Illumina). FASTQ files from Genewiz were used for further analysis analyses were performed using the statistical computing environment R (v4.0.0) ...
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bioRxiv - Cell Biology 2021Quote: ... 8 bases for index 1 and 8 bases for index 2) using the NextSeq 500 High Output Kit 75-cycles (#FC-404-1005, Illumina) loaded at 1.8pM and including 1 % PhiX ...
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bioRxiv - Microbiology 2020Quote: ... The libraries were sequenced on the MiSeq™ platform using the MiSeq™ Reagent Kit v3 (2 × 250 bp; Illumina).
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bioRxiv - Systems Biology 2021Quote: ... and 2 × 100 base paired-end sequencing libraries were sequenced using the Illumina HiSeq 2500 with v3 sequencing reagents (Illumina).
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bioRxiv - Plant Biology 2021Quote: ... The final library was diluted to a loading concentration of 1.4 pM for cluster generation and 2 × 150 bp paired-end sequencing on the Illumina NextSeq500 system (Illumina Inc) alongside a 5% PhiX spike-in control library ...
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bioRxiv - Microbiology 2020Quote: ... Read 1 and 2 adapter recognition sequences were provided for adapter removal (Illumina TruSeq Adapter Read 1: AGATCGGAAGAGCACACGTCTGAACTCCAGTCACNNNNNNATCTCGTATGCCGTCTTCTGCT TG, Illumina TruSeq Adapter Read 2 ...
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bioRxiv - Microbiology 2020Quote: ... The PCR product mixture was sent to FASMAC to acquire 2 × 250 bp paired-end sequences using the MiSeq platform (Illumina).
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bioRxiv - Genomics 2021Quote: ... quantified by Qubit and analyzed for fragment distribution with a Bioanalyzer and used for paired-end sequencing (2 x 75 cycles) on a MiSeq System (Illumina).
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bioRxiv - Genomics 2021Quote: ... analyzed for fragment distribution with a Bioanalyzer and sequenced with paired-end settings (2 x 75 cycles) on a MiSeq System (Illumina).
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bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
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bioRxiv - Microbiology 2021Quote: ... The purified PCR products were then processed and sequenced using the NextSeq 75 – High Output (82 cycles in read 1, 8 cycles in index 1, and 8 cycles in index 2 SE reads) (Illumina). The sequencing data was analyzed using the Model-Based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK ...
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bioRxiv - Microbiology 2021Quote: ... Sequencing was performed in paired-end mode with a SP flow cell (2 x 50 cycles) using NovaSeq 6000 sequencer (Illumina).
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bioRxiv - Microbiology 2021Quote: ... Illumina sequencing (2× 300 bp paired-end reads) was conducted using an Illumina MiSeq platform (Illumina, San Diego, California, USA) at JAMSTEC ...
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bioRxiv - Microbiology 2020Quote: ... Multiplexed paired-end libraries (2 × 150 bp) were prepared using the Nextera XT DNA kit (Illumina, San Diego, CA, USA) and eventually sequenced with an Illumina NextSeq-500 instrument at a minimum of 50X coverage depth ...
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bioRxiv - Cancer Biology 2020Quote: ... Parental and prostate tumor-passaged chromosomal genomic DNA were sequenced following the standard Next Generation Sequencing NovaSeq 2×100 protocol (Illumina) and aligned against the parental LT2 and associated stable pSLT reference sequences (NCBI ...
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bioRxiv - Cell Biology 2021Quote: ... The final libraries were generated through size selection and PCR enrichment and sequenced as 2×150bp on a HiSeq2500 Sequencer (Illumina). Samples were sequenced to an approximate depth of 35–40 million reads per sample ...
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Mitochondrial mutations in Caenorhabditis elegans show signatures of oxidative damage and an AT-biasbioRxiv - Genetics 2021Quote: ... 2) calls duplex consensus sequences (DCSs) based on shared random barcodes (each DCS required a minimum of six raw Illumina reads – at least three from each strand) ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were purified using Ampure XP beads and sequenced using MiSeq V2 (150bp x 2) chemistry (Illumina, San Diego, CA). 18S V4+V5 amplification was achieved using the iProof DNA polymerase (Bio-Rad Laboratories ...
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bioRxiv - Molecular Biology 2022Quote: ... followed by library construction using non-stranded (Replicate 1) or stranded (Replicates 2 and 3) TruSeq mRNA Library Prep Kit (Illumina). The resulting libraries were sequenced on Hiseq4000.
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bioRxiv - Neuroscience 2022Quote: ... Indexed libraries were pooled and sequenced (2*75 bp paired-end sequencing) on an Illumina NextSeq 500 platform (Illumina, USA).
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bioRxiv - Neuroscience 2022Quote: ... RNAseq libraries were sequenced on a Hiseq2500 and HISeq4000 on a 2×100 bp paired end (PE) flow cell (Illumina) at an average of 100M PE/sample.
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SARS-CoV-2 Point Mutation and Deletion Spectra, and Their Association with Different Disease OutcomebioRxiv - Microbiology 2022Quote: ... and sequenced using MiSeq sequencing platform with MiSeq Reagent kit v3 (2 × 300 bp mode with the 600 cycle kit) (Illumina).
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bioRxiv - Plant Biology 2022Quote: ... were pooled in equimolar amounts, quantified using qPCR and sequenced (paired-end, 2 × 250 cycles) on the NovaSeq 6000 (Illumina).
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Core Microbiota Drive the Prevalence of Extracellular Antibiotic Resistome in the Water CompartmentsbioRxiv - Microbiology 2022Quote: ... Paired-end sequencing (2 × 300 bp) of purified amplicons was realized on an Illumina MiSeq platform (Illumina, San Diego, USA) based on the standard protocols (Majorbio Bio-Pharm Technology Co ...
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bioRxiv - Microbiology 2022Quote: ... The PCR-generated amplicon libraries were subjected to paired-end 2×250 Illumina MiSeq sequencing (Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2022Quote: ... analyzed on the Bioanalyzer and sequenced in 2*110 bp paired-end mode on a P2 flowcell of a NextSeq1000 sequencer from Illumina.
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bioRxiv - Microbiology 2022Quote: ... with random fragmentation to 350 bp and sequencing of 2×150 bp on a NovaSeq 6000 S4 flow cell (Illumina).
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bioRxiv - Cell Biology 2022Quote: ... The libraries were sequenced as 50 X 2 paired end reads on an Illumina HiSeq 4000 (Illumina, San Diego, CA) using the HiSeq Control Software HD 3.4.0.38 collection software ...
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bioRxiv - Molecular Biology 2020Quote: Libraries were mixed in equimolar amounts (10 to 15 libraries per pool) and library pools were sequenced on a HiSeq 2000 (2×75bp) (Illumina) at the CNAG ...
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bioRxiv - Immunology 2020Quote: ... The indexed libraries were pooled and diluted to 1.5pM for paired end sequencing (2× 76 cycles) on a NextSeq 500 instrument using the v2 150 cycle High Output kit (Illumina) as per manufacturer’s instructions ...
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bioRxiv - Genomics 2021Quote: ... were harvested and 50,000 cells for each condition were processed for ATAC-seq libraries using previously reported protocol (Corces et al, 2017) and sequenced PE 2×75 NextSeq 500 (Illumina). The quality metrics of the FASTQ files were checked using FASTQC and the adapters were removed using trim_galore ...
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bioRxiv - Microbiology 2021Quote: ... Sequencing was performed by employing an Illumina HiSeq 2500 system and the HiSeq Rapid SBS kit V2 (2×250 bp) as recommended by the manufacturer (Illumina). Metagenomic reads were further processed as described previously (Eze et al ...
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Peripheral neuropathy linked mRNA export factor GANP reshapes gene regulation in human motor neuronsbioRxiv - Neuroscience 2021Quote: The RNA-seq libraries were made with NEBNext Ultra II Directional (PolyA) kit and sequenced with NovaSeq SP 2×150bp (Illumina) at Biomedicum Functional Genomics Unit (FuGU) ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequencing (2×100bp) was performed with Illumina NovaSeq 6000 sequencing platform on a SP flowcell (Illumina, ref: 20040326).
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bioRxiv - Microbiology 2021Quote: ... DNA was diluted to 0.2 ng/μL in nuclease-free water and processed for sequencing using the Nextera XT DNA Library Prep Kit (Illumina).
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bioRxiv - Immunology 2022Quote: ... TCRseq libraries were sequenced on an Illumina Novaseq 6000 SP flowcell (67 bp read 1 and 459 bp read 2) (Illumina) to a depth of approximately 20,000 reads.
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bioRxiv - Immunology 2022Quote: ... Targeted RNAseq and Sample Tag libraries were sequenced on an Illumina Novaseq 6000 S4 flowcell (67 bp read 1 and 140 bp read 2) (Illumina) to a depth of approximately 40,000 reads and 10,000 reads per cell ...
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bioRxiv - Immunology 2022Quote: ... whose lengths were about 600 base pairs were sequenced using an Illumina Novaseq 6000 S4 flowcell (67 bp read 1 and 140 bp read 2) (Illumina). Only read2 contained the sequence regarding the definition of T cell clones.
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bioRxiv - Immunology 2022Quote: ... Equimolar amounts of each library were paired-end sequenced (2*38 bp, 75 cycles) on a NextSeq 550 instrument (Illumina) using the NextSeq 500/550 High Output Kit v2.5 (Illumina).
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bioRxiv - Cancer Biology 2022Quote: ... The libraries were quantified by qPCR and sequenced in paired-end mode (2×75 bp) with NextSeq 500 (Illumina, CA). For each sample generated by the Illumina platform ...
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bioRxiv - Cancer Biology 2022Quote: ... The bead-bound fragments are then amplified and sample indexed using P5 and RPI-X (binds the TruSeq Small RNA Read 2 handle and adds a sample index and P7 Illumina sequencing handle ...
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bioRxiv - Cell Biology 2022Quote: ... cells were pooled and sequenced on an Illumina NextSeq instrument using 2×75 paired end reads on a NextSeq high output kit (Illumina). Reads were mapped to the Mus musculus mm10 reference genome using STAR ...
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bioRxiv - Genomics 2022Quote: ... Library preparation and sequencing was performed by the Innovative Genomics Institute Next-Genration Sequencing Core using MiSeq V2 Micro 2×150bp kit (Illumina). Reads were trimmed and merged (Geneious Prime ...
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bioRxiv - Systems Biology 2020Quote: ... DNA was first extracted from stool in line with the Human Microbiome Project’s (HMP) Core Sampling Protocol A (hmpdacc.org) and then sequenced using 2 x 300 bp paired-end sequencing (Illumina MiSeq). Raw sequences were processed using Illumina’s software ...
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bioRxiv - Microbiology 2020Quote: ... The sequencing was performed on the Illumina iSeq platform as part of a flowcell (2 x 151, 300 cycles; Illumina). The genomes were trimmed and assembled in CLC Genomics Workbench version 12.0.3 ...
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bioRxiv - Pathology 2020Quote: ... sequencing libraries were generated using 2 µg of total RNA per sample with the TruSeq RNA sample preparation protocol from Illumina according to the manufacturer’s recommendations ...
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bioRxiv - Systems Biology 2020Quote: ... DNA was diluted to 0.2 ng/uL in nuclease-free water and processed for sequencing using the Nextera XT DNA Library Prep Kit (Illumina).
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bioRxiv - Developmental Biology 2020Quote: ... Libraries were constructed with version 2 (stage 16a) or version 3 (stage15 a/b) chemistry and sequenced on a single HiSeqX (Illumina) lane to generate 400-450 million paired-end 150 bp reads (Supplementary Table 4).