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Citations for Illumina :
51 - 100 of 9522 citations for Prostaglandin E2 PGE2 Multi Format ELISA Kit 5 Plate since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2020Quote: ... Sequencing reads were converted from BCL to FASTQ format and demultiplexed using Bcl2fastq2 (Illumina, 2017). The first 5 base calls were then trimmed and low quality reads filtered out using FASTX-Toolkit (Hannon_Lab ...
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bioRxiv - Microbiology 2021Quote: Illumina BCL sequence files were converted to FASTQ format with the bcl2fastq tool (v2.20.0.422, Illumina). gRNA enrichment/depletion analyses were conducted with the MAGeCK package (version 0.5.9.457 ...
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bioRxiv - Cancer Biology 2022Quote: Sequencing output data was converted to FASTQ-format using bcl2fastq software (v.2.20, Illumina, USA). FastQC was used for quality controls (24) ...
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bioRxiv - Cancer Biology 2022Quote: ... RNA-sequencing was performed using 150-bp paired-end format on a NovaSeq 6000 (Illumina) sequencer ...
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bioRxiv - Cancer Biology 2020Quote: ... RNA-sequencing was performed using 150-bp paired-end format on a NovaSeq 6000 (Illumina) sequencer ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed in 2 x 250 bp paired-end format (Illumina, San Diego, CA). A total of 168 samples were sequenced on two separate sequencing runs at a similar read depth ...
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bioRxiv - Microbiology 2023Quote: ... The resulting libraries were sequenced in a paired-end format on a NovaSeq 6000 (Illumina).
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bioRxiv - Neuroscience 2023Quote: ... Genotype information was converted to vcf format using “iaap-cli gencall” and “gtc_to_vcf.py” from Illumina.
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bioRxiv - Plant Biology 2019Quote: ... the obtained cDNAs were used for the preparation of libraries and sequenced in multiplex format (Illumina HiSeq 2000 in paired end 2x 100 nt reads) ...
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bioRxiv - Genomics 2020Quote: ... (Sacramento, CA) using 150-bp paired-end format on a NovaSeq 6000 (Illumina, San Diego, CA) sequencer.
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bioRxiv - Genomics 2019Quote: Data processing was performed from raw intensity data (idat format) in GenomeStudio software (v2.0.4; Illumina, Inc.). We then used PLINK software (v1.9 ...
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bioRxiv - Genomics 2019Quote: ... base calls from the NextSeq were demultiplexed and converted to FASTQ format with bcl2fastq (Illumina Inc); adapter trimming was enabled and short trimmed sequences were retained for diagnostic purposes ...
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bioRxiv - Genetics 2020Quote: Raw sequence data was converted to FASTQ format using the bcl2fastq conversion software v2.17.1.14 (Illumina, Inc) and analysed using the pipeline described in Beal et al. ...
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bioRxiv - Cancer Biology 2022Quote: ... Resulting DNA libraries were pooled at 10 nM and sequenced in 2 × 76-bp format (Illumina), resulting in >35 million read pairs per library.
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bioRxiv - Developmental Biology 2024Quote: ... Conversion of BCL (base calls) binary files to FASTQ format is subsequently performed with bcl2fastq2 (Illumina).
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bioRxiv - Bioengineering 2024Quote: The compressed paired-end human mRNA-seq data in fastq format over 80 gigabytes from Illumina PE150 ...
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bioRxiv - Genomics 2023Quote: ... The raw sequencing data were demultiplexed and converted to FASTQ format using bcl2fastq software v2.20.0 (Illumina).
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bioRxiv - Genetics 2022Quote: ... and CNV calls were generated with BlueFuse Multi Software v4.2 (Illumina). CNV calls by SNP array were reported using standard clinical thresholds in the University of California San Francisco Clinical Cytogenetics Laboratory ...
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A rare variant on a common risk haplotype of HFE causes increased risk of hereditary hemochromatosisbioRxiv - Genetics 2019Quote: ... These individuals were genotyped with the Multi-Ethnic Global Array (Illumina) or the Infinium HumanExome BeadChip array (Illumina) ...
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bioRxiv - Evolutionary Biology 2019Quote: Raw sequencing reads were de-multiplexed and converted to FASTQ format using CASAVA version 1.8 (Illumina 2011). Cutadapt version 1.2.1 (Martin 2011 ...
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bioRxiv - Molecular Biology 2022Quote: Illumina sequencing output data were converted to .fastq data format using bcl2fastq software (v.2.20, Illumina, USA). Quality controls were performed throughout the analysis with FastQC (Andrews S ...
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bioRxiv - Cancer Biology 2022Quote: We generated a chimeric genome assembly and RefSeq gene transfer format (GTF) annotation of GRCh38 from Illumina iGenomes (https://support.illumina.com/sequencing/sequencing_software/igenome.html ...
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bioRxiv - Molecular Biology 2020Quote: ... Demultiplexing based on library-specific barcodes and conversion to fastq format was done using bcl2fastq (v1.8.4, Illumina). Duplicate reads were called using BamUtil (v1.0.3) ...
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bioRxiv - Developmental Biology 2024Quote: ... Conversion of BCL (base calls) binary files to FASTQ format is subsequently performed with BCL Convert (Illumina).
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bioRxiv - Neuroscience 2024Quote: Raw sequencing data were demultiplexed and converted to fastq format using bcl2fastq v2.20 (Illumina, San Diego, California). Then reads were aligned to the transcriptome using STAR (version 2.6.1 ...
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bioRxiv - Molecular Biology 2023Quote: ... Both cDNA and MULTI-seq-barcode libraries were sequenced with NextSeq500 (Illumina). We read 8 base pairs (bp ...
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bioRxiv - Genomics 2020Quote: ... on Illumina’s official website (ftp://webdata2:[email protected]/downloads/productfiles/humanomniexpress-24/v1-2/infinium-ommexpress-24-v1-2-mamfest-file-csv.zip) and converted it to a VCF format using Illumina’s GTCtoVCF tool (github.com/Illumina/GTCtoVCF).
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bioRxiv - Developmental Biology 2021Quote: ... Raw sequencing data was demultiplexed and converted to fastq format by using bcl2fastq v2.20 (Illumina, San Diego, CA). Fragment analysis of indexed libraries was performed on the Agilent 4200 TapeStation (Agilent Technologies ...
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bioRxiv - Microbiology 2021Quote: Raw data from the Illumina MiSeq was first converted into FASTQ format 2 × 312 paired-end sequence files using the bcl2fastq program (v1.8.4) provided by Illumina. Format conversion was performed without de-multiplexing ...
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bioRxiv - Microbiology 2022Quote: ... Base-calling was done on the instrument using RTA 3.3.4 and the resulting .bcl files were demultiplexed and converted to FASTQ format with tools provided by Illumina Inc. ...
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bioRxiv - Neuroscience 2021Quote: ... Raw base counts were demultiplexed and converted to sample-specific fastq format files using the bcl2fastq program (Illumina) with default parameters ...
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bioRxiv - Microbiology 2019Quote: Reads in the FASTQ format were cleaned up with trimmomatic/0.36[65] to remove sequences originating from Illumina adaptors and low quality reads ...
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bioRxiv - Immunology 2020Quote: ... Raw data from the Illumina MiSeq was first converted into FASTQ format 2□×□312 paired-end sequence files using the bcl2fastq program (v1.8.4) provided by Illumina. Format conversion was performed without de-multiplexing ...
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bioRxiv - Microbiology 2024Quote: ... The fluorescent images were processed into sequences and transformed to FastQ format using the Genome Analyzer Pipeline Analysis software 1.8.2 (Illumina). The sequence output was controlled for general quality features ...
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bioRxiv - Microbiology 2024Quote: Raw sequence reads were demultiplexed and converted to FASTQ format at the GGBC facility using Cassava v1.8 (Illumina). Following demultiplexing ...
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bioRxiv - Developmental Biology 2023Quote: Raw sequencing data was demultiplexed and converted to fastq format by using bcl2fastq v2.20 (Illumina, San Diego, California). Then reads were aligned to the transcriptome using STAR v2.6.1 (19 ...
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bioRxiv - Developmental Biology 2024Quote: Raw sequencing data was demultiplexed and converted to FASTQ format by using bcl2fastq v2.20 (Illumina, San Diego, California). More than 200 million reads were obtained for each sample ...
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bioRxiv - Immunology 2020Quote: ... 5 μl PPC (Illumina Nextera DNA Sample Preparation Kit) and 20 μl DNA ...
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bioRxiv - Developmental Biology 2023Quote: ... and 5 µM RT Primer (RTP, TruSeq kit; Illumina) was then performed according to the manufacturer’s recommendations ...
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bioRxiv - Cell Biology 2020Quote: ... 5 μl Primer Cocktail (Nextera DNA Sample Preparation Kit and Nextera Index Kit, Illumina). Amplification was performed in a Veriti 96 Well Thermal Cycler (Applied Biosystems ...
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bioRxiv - Genetics 2021Quote: ... the UCSC mm10 mouse reference genome (fasta) and gene annotation (General Transfer Format (GTF)) file were downloaded from Illumina iGenomes (https://sapac.support.illumina.com/sequencing/sequencing_software/iGenome.html) ...
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bioRxiv - Bioengineering 2021Quote: ... The resulting raw sequence data files (.bcl) were converted to the FASTQ format and de-multiplexed with bcl2fastq 2.17 software (Illumina). One mismatch was permitted for index sequence identification ...
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bioRxiv - Developmental Biology 2022Quote: ... Libraries were loaded at a concentration of 1.8 pM and sequenced in an asymmetrical pair-end format in a NextSeq500 instrument (Illumina).
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed for 32 total samples in MiSeq v2 250 bp paired-end format (Illumina, San Diego, CA).
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bioRxiv - Genomics 2024Quote: ... We added a FORMAT (GT) and SAMPLE (0/1) column to the VCF and used hap.py (https://github.com/Illumina/hap.py) to compare the v4.2.1 benchmark VCF and BED (https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/ChineseTrio/HG005_NA24631_son/NISTv4.2.1/GRCh38/) ...
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bioRxiv - Developmental Biology 2021Quote: ... 5’ Illumina adapter (used in the Illumina small RNA kit) and a T7 promoter) ...
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bioRxiv - Genetics 2022Quote: Raw sequencing data were processed and visualized using Bluefuse Multi software (Illumina Inc, CA). A total of 30 samples (3.2% ...
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bioRxiv - Immunology 2021Quote: ... Raw sequence data were obtained in Bcl-files and converted into fastq text format using the bcl2fastq program from Illumina. Validation of RNAseq was performed using qRT-PCR as described below.
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bioRxiv - Microbiology 2021Quote: ... Sequencing libraries were generated in 384-well format using a custom low-volume protocol based on the Nextera XT process (Illumina). Briefly ...
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bioRxiv - Immunology 2022Quote: ... Sequencing libraries were generated in 384-well format using a custom low-volume protocol based on the Nextera XT process (Illumina). Sequencing reads were generated using a NovaSeq S4 flow cell or a NextSeq High Output kit ...