Labshake search
Citations for Illumina :
8601 - 8650 of 9681 citations for hsa mir 185 Real time RT PCR Detection Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... using a modified quarter-volume protocol before sequencing on the MiSeq platform with a MiSeq Reagent Kit v3 (500-cycle; Illumina, CA) to generate 2×250 bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... The extracted DNA was used for library preparation using the Nextera XT DNA library preparation kit (Illumina, San Diego, CA, USA). Libraries were sequenced using Illumina HiSeq X Ten (2 × 150-bp).
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bioRxiv - Plant Biology 2023Quote: ... and 1.5 ug RNA was used for library preparation at the High-throughput Sequencing Facility at UNC Chapel Hill using the Stranded mRNA-Seq kit (Kapa Biosystems. The NovaSeq 6000 sequencer (Illumina) generated 50bp paired-end reads with a read depth of 23-35 million reads per biological replicate ...
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bioRxiv - Genetics 2023Quote: ... was used to isolate total RNA and approximately 1 ug of RNA was processed with the TruSeq Stranded mRNA Library Prep Kit (Illumina 20020594) to prepare libraries for paired-end sequencing on Nova-seq 6000 ...
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bioRxiv - Genomics 2023Quote: ... The sequencing-ready library was cleaned up with SPRIselect and quantified by qPCR (KAPA Biosystems Library Quantification Kit for Illumina platforms). 200 pM of sequencing libraries were loaded on an Illumina HiSeq instruments (see Single-cell RNA sequencing analysis section ...
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bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq6000 sequencer using an S2 sequencing kit (Illumina Inc., San Diego, CA, USA) to an average depth of 45M reads per sample ...
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bioRxiv - Cancer Biology 2023Quote: ... Array-based tissue methylation profiling was performed by following the instructions of the Infinium MethylationEPIC BeadChIP Kit (Illumina, WG-317-1002). Briefly ...
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bioRxiv - Molecular Biology 2023Quote: ... 1 μg of total RNA was subjected to poly(A) enrichment and library preparation using the TruSeq® Stranded mRNA Library Prep Kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: The 200 µL of the lysates described above were treated with RNase I (50 units nuclease per 40 µg of RNA; the nuclease was included in TruSeq Mammalian Ribo Profile Kit, Illumina, RPHMR12126) for 1 hour at room temperature with gentle mixing ...
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bioRxiv - Plant Biology 2023Quote: ... 1 µg DNA from all the samples was used to prepare sequencing libraries with TruSeq Nano DNA HT Sample Preparation Kit (Illumina, USA) and qualified libraries were sequenced on the Illumina HiSeq2500 platform to obtain 2x150 bp reads at approximately 40x coverage ...
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bioRxiv - Genomics 2023Quote: ... The pool was sequenced on an entire lane of a NextSeq 500 HO flow cell to generate paired-end 151 bp reads using the NextSeq 500 High Output Kit v2.5 (300 cycles) (Illumina, Cat # 20024908).
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bioRxiv - Genetics 2023Quote: ... Genomic DNA libraries were prepared either with the Westburg NGS DNA Library prep kit, or with the KAPA DNA HyperPrep (Kapa Biosciences, KK8504) and adapters IDT for Illumina TruSeq DNA UD Indexes (Illumina 20022370), according to the manufacturer recommendations ...
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bioRxiv - Genomics 2023Quote: Three samples of 50 ng each of genomic DNA were sheared and processed using the Nextera DNA Library Prep Kit (Illumina, USA) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: ... Ribosomal RNA was depleted from 500 ng total RNA using the Illumina Ribo-Zero Plus rRNA Depletion Kit (Illumina, Cat. # 20037135). RNA was converted to cDNA ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were prepared using the Ribo-Zero rRNA Removal Kit (Gram-positive Bacteria) (Illumina Inc., San Diego, CA, United Stated) and the TruSeqStranded mRNA library prep kit (Illumina Inc) ...
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bioRxiv - Immunology 2023Quote: ... Illumina sequencing of the 8 samples in 100 million reads/sample was done with the NextSeq 500 High Output Kit v2 (300 cycles) sequencer (Illumina Inc) generating paired end reads of approximately 2 × 75 bp in length ...
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bioRxiv - Neuroscience 2023Quote: ... The denatured library with a final loading concentration of 400 pM in a pool was loaded on the S4 FC using Illumina SBS kits (Illumina, 20012866) with the following setting on the NovaSeq 6000 ...
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bioRxiv - Neuroscience 2023Quote: ... and a duplicate unrelated control sample was diluted to 5 ng/µl in low TE provided in AmpliSeq Library PLUS (384 Reactions) kit (Illumina, 20019103). AmpliSeq was carried out following the manufacturer’s protocol (document 1000000036408v07) ...
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bioRxiv - Physiology 2023Quote: The cDNA library was then prepared from 500 ng of total RNA using the TruSeq stranded mRNA library kit (Illumina, USA) according to the manufactureŕs protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq 6000 sequencer using 100 cycle sequencing kit (Illumina Inc., San Diego, CA) to a minimum read depth of 40 M reads/library ...
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bioRxiv - Genomics 2023Quote: ... RNA libraries were prepared from 500 ng RNA samples using the TruSeq Stranded mRNA Kit (Illumina Inc., San Diego, CA, US) following the manufacturer’s instructions ...
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bioRxiv - Genetics 2023Quote: ... cDNA libraries were prepared with the TruSeq stranded mRNA library prep Kit (cat# RS-122-2101, Illumina, San Diego, CA, USA). The resulting libraries were sequenced on a HiSeq 4000 (Genomics & Cell Characterization Core Facility ...
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bioRxiv - Immunology 2023Quote: ... Sequencing was performed on an Illumina NextSeq 500 sequencer to generate 2 × 76 paired end reads using NextSeq 500/550 High Output kit v2.5 (150 cycles) following the manufacturer’s protocol (Illumina, Cat. No. 20024912). The quality of cDNAs and Illumina libraries were assessed on a TapeStation 2200 with the high sensitivity D5000 ScreenTape (Agilent Cat ...
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bioRxiv - Genomics 2023Quote: ... Nuclei isolation and transposition followed the OMNI ATAC-seq protocol as previously reported11 using the Illumina Tagment DNA TDE1 Enzyme & Buffer Kit (Illumina #20034197). Libraries were generated using Illumina Nextera CD Indexes (Illumina #20018708 ...
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bioRxiv - Microbiology 2023Quote: ... dual indices and adaptors were linked to the amplicon using the Nextera XT Index Kit® (Illumina, San Diego, CA, USA) following the thermal cycler program ...
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bioRxiv - Genomics 2023Quote: ... and pair end sequenced on the Illumina Miseq using the MiSeq Reagent Nano Kit v2 (300-cycles) (Illumina, MS-102-2002).
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bioRxiv - Microbiology 2023Quote: ... DNA libraries of each sample were prepared for whole genome sequencing (WGS) using a Nextera XT kit (Illumina, San Diego, CA). Briefly ...
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bioRxiv - Genomics 2023Quote: ... A total of 4 µg of RNA per sample was subjected to rRNA depletion using the RiboZero Plant Leaf kit (Illumina, MRZPL1224) following the manufacturer’s recommendations ...
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bioRxiv - Genomics 2023Quote: ... Pooled libraries were loaded at a final concentration of 750 pM and sequenced on an Illumina NextSeq 2000 using a P3 2x150 kit (Illumina Inc). De-multiplexing ...
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bioRxiv - Developmental Biology 2023Quote: ... Libraries were prepared from total RNA with the TruSeq Stranded Total RNA Library Prep Kit according to the manufacturer’s instructions (Illumina, PN 20020599). Libraries were analyzed for insert size distribution on a 2100 BioAnalyzer High Sensitivity kit (Agilent Technologies, ...
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Activation of glucocorticoid receptor signaling inhibits KSHV-induced inflammation and tumorigenesisbioRxiv - Cancer Biology 2023Quote: ... mRNA was isolated using Oligo(dT) beads and library was prepared following the Illumina TruSeq Stranded mRNA Library Prep Kit (Illumina, 20020594). Sequencing was carried out using Illumina HiSeq 3000 with the 50-bp single-read sequencing module ...
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bioRxiv - Cancer Biology 2023Quote: DNA libraries were produced from 50 ng of genomic DNA using the Nextera Rapid Capture Exome kit (Illumina, San Diego, USA) as per manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2023Quote: ... Total RNA libraries were produced from 600 ng of RNA using the TruSeq Stranded total RNA library preparation kit (Illumina, 20020596) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: Poly-A enriched strand-specific libraries were generated with the TruSeq mRNA V2 sample preparation kit (Illumina, cat# RS-122-2001), ribosomal RNA depleted strand-specific RNA libraries with the TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina ...
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bioRxiv - Cell Biology 2023Quote: ... 500 ng RNA was used as input for the TruSeq Stranded Total RNA sequencing kit with RiboZero rRNA depletion (Illumina, 20020598). Samples were sequenced at the Harvard University Bauer Core on a NovaSeq 6000 using the S1 300 cycle kit ...
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bioRxiv - Cell Biology 2023Quote: ... DNAse-treated RNA extracts were processed for library preparation using the Truseq Stranded mRNA sample preparation kit (Illumina, San Diego, California) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2023Quote: ... The RNA was subjected to prepare libraries using Illumina TruSeq RNA and DNA Sample Prep Kits (Illumina, San Diego, CA, USA). Library qualities were confirmed using Qubit 2.0 fluorometer (Life Technologies ...
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bioRxiv - Microbiology 2023Quote: ... Whole transcriptome sequencing (total RNAseq) data was generated using the Illumina TruSeq Stranded Total RNA with Ribo-Zero Globin kit (20020612, Illumina Inc.) cDNA was prepared following rRNA and Globin mRNA depletion ...
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bioRxiv - Plant Biology 2023Quote: ... Paired-end sequencing (2 × 75 bp) was performed with a NextSeq 550 System High OutPut kit (Illumina, San Diego, CA, USA). Raw reads are available at GSE227386.
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bioRxiv - Molecular Biology 2024Quote: Amplicons were sequenced on a NextSeq 500 using a NextSeq 500/550 High Output v2.5 75 cycle kit (Illumina cat #20024906) or on a NextSeq 2000 using a NextSeq 1000/2000 P2 Reagents 100 cycle kit (Illumina cat #20046811) ...
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bioRxiv - Developmental Biology 2024Quote: ... The Tagment DNA Buffer and TDE1 enzyme are both contained in the Tagment DNA TDE1 Enzyme and Buffer Kit (Illumina, 20034197). The transposed chromatin was isolated using the Minelute PCR Cleanup kit (Qiagen ...
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bioRxiv - Genomics 2024Quote: ... RNA libraries for RNA-Seq were prepared using the Illumina TruSeq Stranded Total RNA Ribo-Zero Plant kit (Illumina, CA, US), and sequenced on the Illumina platform in paired-end mode and 150 bp read-length (Psomagen ...
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were prepared by the University of Colorado Genomics Shared Resource using Illumina TruSeq Stranded mRNA Library Prep kit (Illumina, #20020595) and sequenced using paired end 50 cycles 2 x 50 on the NovaSEQ 6000 with >30 million reads per sample obtained ...
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bioRxiv - Genomics 2024Quote: 1 ng of psoralen pull-down DNA (or corresponding Input DNA from the same cells without pull-down) was used to prepare sequencing libraries using a Nextera XT library prep kit (Illumina, Inc) according to the manufacturer protocol ...
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bioRxiv - Plant Biology 2024Quote: RNA-seq libraries were constructed by the POPS platform (IPS2) using the Illumina Stranded mRNA Prep kit (Illumina®, California, U.S.A.) according to the supplier’s instructions ...
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bioRxiv - Developmental Biology 2024Quote: ... and samples with an RNA Integrity Number (RIN) >8 were used to generate RNA sequencing libraries using the Illumina® Stranded mRNA Prep kit (Illumina).
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bioRxiv - Molecular Biology 2024Quote: ... validated for activity in a corresponding assay and three clones of each cell line were subjected to a genotyping array screening using a Infinium Global Screening Array-24 Kit (Illumina, #20030770) to check for chromosomal rearrangements in iPSCs clones ...
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bioRxiv - Plant Biology 2024Quote: ... Index-coded samples were clustered on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina, USA) and sequenced on an Illumina Novaseq platform to generate 150bp paired-end reads with a sequencing depth of 10 million reads per sample ...
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bioRxiv - Cancer Biology 2024Quote: ... RNA concentration was quantified using a Nanodrop and 1 µg of RNA per sample was submitted to the Abigail Wexner Research Institute Genomic Services Laboratory for library preparation using the TruSeq Stranded mRNA Kit (Illumina 20020594), library quality control ...
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bioRxiv - Microbiology 2024Quote: ... Purified 16S rRNA gene sequences were analyzed using a MiSeq Reagent Kit v3 and MiSeq system (Illumina, San Diego, CA, USA). Raw 16S rRNA gene sequences were analyzed using QIIME 2 (ver.2021.4 ...