Labshake search
Citations for Illumina :
7151 - 7200 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Biochemistry 2023Quote: ... Libraries were then performed by PCR with a library preparation kit (Vazyme, TD501) and sequencing was done using the Novaseq system (Illumina) according to the manufacturer’s protocol.
-
bioRxiv - Genomics 2023Quote: RNA-seq libraries were prepared from 1 μg of total RNA using the TruSeq RNA Library Prep Kit v2 (Illumina) with poly(A ...
-
bioRxiv - Bioengineering 2023Quote: ... pair-end single index sequencing parameters were adjusted to 101/6/0/86 (as opposed to 74/6/0/86) to effectively utilize the capabilities of the NovaSeq 200 cycle reagent kit (Illumina). To demultiplex each sample and to generate the matrix of transcript counts in each cell ...
-
bioRxiv - Neuroscience 2023Quote: ... Preparation of the RNA sample library and RNA-seq were performed by the Genomics Core Laboratory at Weill Cornell Medicine using Illumina Stranded mRNA Sample Library Preparation kit (Illumina), according to the manufacturer’s protocol ...
-
Engineering TALE-linked deaminases to facilitate precision adenine base editing in mitochondrial DNAbioRxiv - Molecular Biology 2023Quote: ... we utilized an Illumina DNA Prep kit with Nextera DNA CD Indexes to create an NGS library from the purified PCR products (Illumina). The libraries were then pooled and transferred onto a MiniSeq sequencer (Illumina).
-
bioRxiv - Molecular Biology 2023Quote: ... Sequencing libraries were prepared from purified RNA for two or three biological replicates using TruSeq RNA Library Prep kit v2 (Illumina). Libraries were sequenced on the Illumina HiSeq 2500 or Illumina NovaSeq.
-
bioRxiv - Physiology 2023Quote: ... mRNA-Seq libraries were then prepared using the Illumina Nextera XT DNA Library Preparation kit (Illumina Cat # FC-131-1024). 1 ng of cDNA was used as input and 12 amplification cycles were used during PCR enrichment ...
-
bioRxiv - Microbiology 2023Quote: ... Libraries were constructed using the Illumina Stranded Total RNA library preparation protocol and rRNA was removed using the Ribo-Zero Plus rRNA depletion kit (Illumina). Libraries were sequenced on the Illumina NovaSeq 6000 platform (paired-end ...
-
bioRxiv - Plant Biology 2023Quote: ... The RNAseq library for each sample was prepared with a 1250 ng of total RNA using the TruSeq RNA Sample Preparation kit (Illumina) according to the manufacturer’s instructions ...
-
bioRxiv - Microbiology 2023Quote: ... tuberculosis gDNA was fragmented with a Covaris S220 ultrasonicator and a whole genome library was prepared using the TruSeq Nano library preparation kit (Illumina). Library fragments containing Tn junctions were PCR-amplified from the whole genome library using the Tn-specific primer Mariner_1R_TnSeq_noMm and Illumina p7 primer (Table S4) ...
-
bioRxiv - Microbiology 2024Quote: ... Libraries were pooled and sequenced (single-end 75-bp reads) on Illumina NextSeq 500 using the High Output V2 kit (Illumina). Sequencing data were analyzed as described previously76 (additional details are provided in Supplementary Methods).
-
bioRxiv - Cancer Biology 2024Quote: ... Sequencing libraries were prepared with the TruSeq Stranded Total RNA LT or TruSeq Stranded Total RNA-seq Sample Prep Kit from Illumina and sequenced paired-end for 6-hour and 72-hr ...
-
bioRxiv - Neuroscience 2024Quote: ... Single nuclei were isolated from frozen brain tissue using iodixanol-based density gradient centrifugation and submitted to UCLA Technology Center for Genomics and Bioinformatics for library preparation (via Chromium Single Cell 3’ v3 kit from 10x Genomics) and sequencing (via NovaSeq 6000 S2 platform from Illumina). Cell Ranger (10x Genomics ...
-
bioRxiv - Neuroscience 2024Quote: ... DNA libraries suitable for sequencing were prepared from 300-500 ng of total RNA with oligo-dT capture beads for poly-A-mRNA enrichment using the TruSeq Stranded mRNA Library Preparation Kit (Illumina) according to manufacturer’s instructions (1/2 volume) ...
-
bioRxiv - Cancer Biology 2024Quote: ... and the 10x Genomics recommended sequencing parameters were used to run on the NovaSeq 6000 with S4 PE 100 kits (Illumina).
-
bioRxiv - Cell Biology 2024Quote: ... Indexed libraries were pooled equimolar and sequenced on a NovaSeq 6000 in a PE28/88 run using the NovaSeq 6000 SP Reagent Kit (100 cycles) (Illumina). FASTQ files from sequencing (NovaSeq ...
-
bioRxiv - Biochemistry 2024Quote: ... San Francisco Genomics CoLab using a Miniseq high output 150 cycles kit for paired end reads (Illumina FC-420-1002). Samples were demultiplexed and analysis performed using the University of California ...
-
bioRxiv - Microbiology 2024Quote: ... RNA-Seq libraries were prepared using the Illumina stranded total RNA prep ligation with Ribo-Zero plus kit (Illumina, 20040529) and IDT for Illumina RNA UD Indexes (illumina ...
-
bioRxiv - Microbiology 2024Quote: DNA was extracted with a bead-beating + enzymatic lysis manual extraction method and sequencing libraries were prepared using ¼ volume reactions of the Illumina DNA Prep kit and Nextera Unique Dual Indexes (Illumina), as previously described (20) ...
-
bioRxiv - Microbiology 2024Quote: Extracted nucleic acids were used for library preparation using the Nextera XT DNA library preparation kit with 15 amplification cycles (Illumina) and subjected to paired-end sequencing in a NextSeq 550 device with the read length of 150 bp at each end ...
-
bioRxiv - Neuroscience 2024Quote: ... DNA libraries suitable for sequencing were prepared from 500 ng of total RNA with oligo-dT capture beads for poly-A-mRNA enrichment using the TruSeq Stranded mRNA Library Preparation Kit (Illumina) according to manufacturer’s instructions (optimized for ½ volume reactions) ...
-
bioRxiv - Microbiology 2024Quote: ... Sequencing of the purified 2nd PCR products was performed using the MiSeq system and MiSeq Reagent Kit v3 (Illumina, USA) with a 2x300 bp read length protocol ...
-
bioRxiv - Microbiology 2024Quote: ... The library pool was diluted and denatured according to the standard NovaSeq protocol and sequenced to generate paired-end 152 bp reads using a NovaSeq 6000 SP reagent kit v1.5 (300 cycles) (Illumina, 20028400). After sequencing ...
-
bioRxiv - Microbiology 2024Quote: ... using 28 + 91 -bp paired-end reads and 8-bp Index 1 reads with a 100-cycle kit (Illumina, 20028400).
-
bioRxiv - Immunology 2024Quote: Libraries for each sample were sequenced on a NextSeq550 75 Cycle High Output sequencing kit (Illumina Inc., Sunnyvale, CA, USA). For each library ...
-
bioRxiv - Immunology 2024Quote: ... Sequencing was performed using Illumina NextSeq 500 and NextSeq 500/550 High Output Kit v.2.5 (75 cycles) (Illumina, 20024906). Raw reads were analysed by the BlueBee Platform (Lexogen) ...
-
bioRxiv - Immunology 2024Quote: mRNA sequencing libraries were prepared from 100ng of total RNA using the Stranded mRNA Prep Ligation library preparation kit (Illumina), which allows to perform a strand specific sequencing ...
-
bioRxiv - Microbiology 2024Quote: ... The resulting libraries were multiplexed and sequenced on an Illumina NextSeq 500 system as a paired end (PE) 50-35 nucleotide run using a NextSeq 500/550 High Output 75 cycles v2 reagent kit (Illumina).
-
bioRxiv - Molecular Biology 2024Quote: ... The cDNA libraries were sequenced with single-end 150 bp reads on the Illumina NextSeq 550 platform using High Output Kit v2 (Illumina); data were deposited in ENA-Accession No ...
-
bioRxiv - Molecular Biology 2024Quote: ... Newborn and maternal samples were sequenced on separate flow cells (NextSeq 500/550 High Output Kit v2.5 75 Cycles, Illumina, 20024906) using 1600 pg/sample in the newborn cohort and ...
-
bioRxiv - Bioengineering 2024Quote: ... The NGS library was run on an Illumina MiniSeq using a 300-cycle mid output kit (Illumina, FC-420-1004). Editing was quantified using CRISPResso2 in standard mode ...
-
bioRxiv - Zoology 2024Quote: ... and the complementary DNA libraries were constructed using magnetic beads and Illumina’s NEBNext Ultra RNA Library Prep Kit (Illumina, USA). The RNA sequencing was conducted on an Illumina platform ...
-
bioRxiv - Physiology 2024Quote: ... 150 base-pair paired-end read RNA-seq was performed with HiSeq 3000/4000 PE Cluster Kit (PE-410-1001; Illumina) and HiSeq 3000/4000 SBS Kit (300 Cycles ...
-
bioRxiv - Physiology 2024Quote: ... was used for RNA-seq library preparation with a TruSeq Stranded mRNA Library Prep Kit for NeoPrep (NP-202-1001; Illumina) that allows polyA-oligo(dT)-based purification of mRNA ...
-
Genetic gradual reduction of OGT activity unveils the essential role of O-GlcNAc in the mouse embryobioRxiv - Developmental Biology 2024Quote: ... Library preparation was performed by EMBL Genomics Core Facility using the TruSeq Stranded mRNA Library Preparation kit according to the manufacturer’s instructions (Illumina #20020594). All libraries were pooled and sequenced in one run (75 bp single-end mode ...
-
bioRxiv - Plant Biology 2024Quote: ... Strand-specific total RNA-Sequencing libraries were prepared using the TruSeq Stranded Total RNA with Ribo-Zero Plant kit according to the manufacturer’s specifications (Illumina 20020610). ERCC RNA Spike-In Control Mix (Ambion 4456740 ...
-
bioRxiv - Immunology 2024Quote: Bulk RNA-Seq: Libraries were generated using a QuantSeq 3’ mRNA-Seq Library Prep Kit (Lexogen) and sequenced using a NovaSeq (Illumina). After adaptor trimming ...
-
bioRxiv - Genetics 2024Quote: ... We prepared the PCR amplicons for sequencing using the Nextera XT DNA Library Preparation Kit (Illumina, San Diego, CA, USA) and sequenced them on a MiSeq instrument (Illumina ...
-
ZNF143 binds DNA and stimulates transcription initiation to activate and repress direct target genesbioRxiv - Genomics 2024Quote: ... 0.1% Tween-20 in PBS) and added 2.5µl of TDE1 Tn5 transposase (Illumina Tagment DNA TDE1 Enzyme and Buffer Kit). We incubated the transposition reaction at 37°C for 30 min ...
-
bioRxiv - Genomics 2024Quote: ... and reduced representation libraries were sequenced using single-end reads with a NextSeq 2000 P2 reagent kit (100 Cycles; Illumina).
-
bioRxiv - Evolutionary Biology 2024Quote: ... RNA was fragmented by hydrolysis for 2 minutes at 94° and cDNA synthesis was performed with random hexamers following the TruSeq Stranded RNA kit protocol (Illumina). To achieve strand specificity ...
-
bioRxiv - Developmental Biology 2024Quote: ... Pooled and size-selected sequencing libraries were sequenced on an Illumina NextSeq 550 instrument using a High Output kit (Illumina) with 38-bp paired-end reads setting.
-
bioRxiv - Cell Biology 2024Quote: ... The library preparation and RNA sequencing was performed by Birmingham Genomic centre using Lexogen QuantSeq 3’ mRNA-Seq Library Prep Kit FWD from Illumina. Libraries were quantified using a PicoGreen Quant-iT kit and sized with a D1000 tape ...
-
ATP-dependent citrate lyase Drives Left Ventricular Dysfunction by Metabolic Remodeling of the HeartbioRxiv - Molecular Biology 2024Quote: RNA-sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Sample Preparation Kit (Cat#20020594, Illumina, San Diego, CA). RNA was extracted from isolated cardiomyocytes using the QIAGEN RNeasy Fibrous Tissue Mini Kit (Cat#74704 ...
-
bioRxiv - Systems Biology 2024Quote: ... This resulted in multiplexed pools of 96 samples each that were used for library preparation with the Nextera XT DNA sample prep kit (Illumina), returning 3′-biased cDNA fragments ...
-
bioRxiv - Cancer Biology 2024Quote: ... 1µg of RNA was used for library generation using Illumina TruSeq Stranded mRNA Library Prep kit (Illumina #RS-122-2103). Sequencing was performed on an Illumina HiSeq 4000 (settings ...
-
bioRxiv - Microbiology 2024Quote: ... and an equimolar pool of the 12 libraries was sequenced by the High-throughput sequencing facility of I2BC with NextSeq 500/550 High output kit V2 (75 cycles) (Illumina) with 10 % PhiX ...
-
bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
-
bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
-
bioRxiv - Immunology 2024Quote: ... Single-cell RNA libraries were prepared according to the 10x Genomics Chromium Single Cell 3′ Reagent Kits v2 User Guide and sequenced (paired-end) on a HiSeq 4000 (Illumina).