Labshake search
Citations for Illumina :
6851 - 6900 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Genetics 2023Quote: ... Samples were indexed and pairs for each experiment were pooled for sequencing using the NextSeq 500/550 Hi Output KT v2.5 (Illumina #20024907) on an Illumina NextSeq550 ...
-
bioRxiv - Genetics 2023Quote: ... the qualified libraries were sequenced by 250-bp paired-end reads on a MiSeq platform (Illumina).
-
bioRxiv - Genetics 2023Quote: ... 150 pg of cDNA was used to produce sequencing libraries with the Nextera XT DNA Sample Preparation Kit (Illumina, FC-131-1024). Libraries were then sequenced for 50 single read cycles and 30 million reads per sample on Illumina NovaSeq 6000 ...
-
bioRxiv - Genetics 2023Quote: The library was prepared using the Nextera XT DNA Library preparation kit (Illumina, San Diego, USA) as previously described (9) ...
-
bioRxiv - Genetics 2023Quote: ... and sequenced on a MiSeq sequencer using a 300-cycle v2 kit (Illumina).
-
bioRxiv - Genetics 2023Quote: ... Sequencing was performed using HiSeq X Ten (Illumina). The data were aligned to GRCm38 mm10 using HISAT2-2.1.0 ...
-
bioRxiv - Genetics 2023Quote: ... The data were aligned to GRCh38 and transcript count was performed using Dragen (Illumina) while referring to the GRCh38.35 gtf files ...
-
bioRxiv - Genetics 2023Quote: ... Sequencing was performed using HiSeq 2500 (Illumina). The data were aligned to the GRCm38 mm10 reference genome using BWA v.0.7.17 ...
-
bioRxiv - Genetics 2023Quote: ... and the libraries were subjected to 1 × 7 bp high-throughput sequencing by NextSeq 500 (Illumina).
-
bioRxiv - Genetics 2023Quote: ... Sequencing was performed using NovaSeq (Illumina). The data were aligned to GRCh38 and transcript count was performed using Dragen (Illumina ...
-
bioRxiv - Genetics 2023Quote: ... For this we took control individuals from 569 individuals of the FrEx database who have genotyping data (Illumina OmniExpressExome array). Positions corresponding to this array were extracted from the 346 case individuals and we then phased (SHAPEIT4 ...
-
bioRxiv - Genetics 2023Quote: ... Libraries were prepared using Nextera XT DNA library preparation kits (Illumina, Inc., San Diego, CA) following the manufacturers protocol ...
-
bioRxiv - Genetics 2023Quote: ... All purified amplicons (25 µL) were submitted for MiSeq sequencing (Illumina, paired-end, 2×300 bp) to Eurofins Genomics (Germany).
-
bioRxiv - Genetics 2023Quote: ... Amplicons were submitted for MiSeq sequencing (Illumina, paired-end) to the MNHN SSM (Service de Systématique Moléculaire ...
-
bioRxiv - Genetics 2023Quote: Sequencing was performed on a MiSeq instrument using a MiSeq Reagent Kit v3 (150-cycle; Illumina; cat. no. MS-102-3001) following standard procedures ...
-
bioRxiv - Genetics 2023Quote: ... Paired-end read sequencing was done in a NextSeq 500/550 platform using either the 150-cycle Medium Output Kit (Illumina # 20024909), 75 cycles per read ...
-
bioRxiv - Genetics 2023Quote: ... or the 75 cycle High Output Kit (Illumina # 20024906), 37 cycles per read.
-
bioRxiv - Genetics 2023Quote: ... DNA libraries were prepared using the Illumina DNA Library Prep (Illumina # 20018704). For each sample 100 ng of genomic DNA was used following the manufacturer’s instructions with the following exceptions ...
-
bioRxiv - Genetics 2023Quote: ... Sequencing for both input and output libraries were performed using a NextSeq Mid or High Output Kit with 150-cycles (Illumina). Additionally ...
-
bioRxiv - Genetics 2023Quote: ... Sequencing was performed with a paired-end run using a NextSeq High Output Kit with 150-cycles (Illumina).
-
bioRxiv - Genetics 2023Quote: ... Illumina’s gvcfgenotyper v2019.02.26 (https://github.com/Illumina/gvcfgenotyper/) was used to merge the strelka genome VCF (gVCF ...
-
bioRxiv - Genetics 2023Quote: ... australis were reconstructed from Illumina paired end reads (SRA run accession number ...
-
bioRxiv - Genetics 2023Quote: ... but the results were verified using the data from the parallel genome assemblies that were made from Illumina and nanopore reads as well as the transcriptome assemblies produced using Trinity.
-
bioRxiv - Genetics 2023Quote: ... then prepared library using the Illumina Nextera DNA Library Preparation Kit (Illumina, Inc., San Diego, CA, USA). Samples were sequenced on a fraction of a HiSeq2000 lane to an average depth ranging from 4 to 12 ...
-
bioRxiv - Genetics 2023Quote: ... the input libraries were also sequenced using a MiSeq with 300-cycles (Illumina).
-
bioRxiv - Genetics 2023Quote: ... Sequencing was performed with a paired-end run using a NextSeq High Output Kit with 150-cycles (Illumina).
-
bioRxiv - Genetics 2023Quote: We had the genotypes of 6958 individuals with the 50K SNPs chip (Illumina Infinium® BovineSNP50 BeadChip). Quality control was performed by removing SNPs with a call rate inferior to 99% ...
-
bioRxiv - Genomics 2023Quote: The Illumina® TruSeq® Stranded mRNA Sample Preparation kit (Illumina Inc., San Diego, California, USA) was used to construct the libraries ...
-
bioRxiv - Cell Biology 2023Quote: ... and a NovaSeq 6000 sequencer (Illumina). Variants were filtered at a minor allele frequency of < 0.1% or missing in gnomAD ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Samples were prepared for sequencing on the Illumina HiSeq 3000 using Nextera DNA Library Prep kits (Illumina), and metagenomes (2×150 bp ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... The sequencing was performed using a Nextseq 500 Instrument (Illumina, USA) with a 2×150 bp paired-end protocol at the Plateforme de Microbiologie Mutualisée (P2M ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Ribo-Zero Plus library preparation and next-generation sequencing (Illumina NovaSeq S4) were performed at AGRF ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Tisiphia’ genomes (including the Illumina assembly from the first step) to identify sequences belonging to this strain of ‘Ca ...
-
bioRxiv - Genetics 2023Quote: ... and 4 μl of bisulfite-converted DNA was measured on the Illumina HumanMethylation450 array using the manufacturer’s protocol (Illumina, San Diego, CA, USA). Preprocessing and normalization of the data were done using DNAmArray workflow previously developed by our group (https://molepi.github.io/DNAmArray_workflow/) ...
-
bioRxiv - Genetics 2023Quote: ... 500ng of total RNA with RIN values of 6.5-10 underwent polyA selection and TruSeq library preparation according to instructions provided by Illumina (TruSeq Stranded mRNA LT Kit ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... pooled and sequenced on a NovaSeq 6000 sequencer (Illumina, San Diego ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing was performed using a NextSeq500 sequencer (Illumina). Mutations and their frequency were called using breseq (Deatherage and Barrick ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing on a MiSeq sequencer (Illumina, San Diego ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Illumina Nextera kit (Illumina, San Diego, CA) was used for library preparation and the samples were sequenced with NextSeq 550 platform ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Libraries were prepared according to the manufacturer’s instructions using the TruSeq Stranded mRNA Prep Kit (Illumina #20020594). The resulting libraries were quantified using a Bioanalyzer (Agilent Technologies ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Amplicons of the V3-V4 hypervariable region (341f/806r) were sequenced using the Illumina MiSeq platform (Illumina, USA) with 2x 300-bp paired-end read settings at the IKMB ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... after which a custom second-strand synthesis buffer (Illumina), dNTPs ...
-
bioRxiv - Genetics 2023Quote: ... using the HiSeq 3000/4000 SBS Kit or NovaSeq 6000 S1 Reagent Kit (100 Cycles) (Illumina).
-
bioRxiv - Genetics 2023Quote: ... The transposition reaction containing TDE1 Tagment DNA Enzyme (Illumina; 20034198) was incubated at 37°C for 30 minutes ...
-
bioRxiv - Genetics 2023Quote: ... using the HiSeq 3000/4000 SBS Kit or NovaSeq 6000 SP or S2 Reagent Kit (100 Cycles) (Illumina).
-
bioRxiv - Developmental Biology 2023Quote: The bcl files were converted to fastq using bcl2fastq (Illumina) and quality controlled using FastQC65 and demultiplexed using Pheniqs66 ...
-
bioRxiv - Genetics 2023Quote: ... followed by the Nextera XT DNA sample preparation Kit (Illumina) and sequenced using the Illumina Hiseq 4000 technology (1x50 bases) ...
-
bioRxiv - Genomics 2023Quote: ... we estimate the posterior probability palt that the barcode deviates from the standard list due to sequencing error using the quality scores for the putatively errant base provided by Illumina or Element palt = falt10-q/10 where q is the quality score ...
-
bioRxiv - Genomics 2023Quote: ... WES with at least 97% coverage at 20x was performed using the Illumina NovaSeq6000 System (Illumina, San Diego, CA, USA). Library preparation was performed using the Illumina Exome Panel (Illumina ...
-
bioRxiv - Genomics 2023Quote: ... and scATAC-seq libraries were sequenced on Illumina NextSeq instruments using NextSeq High Output Kit (Illumina #20024907) with 64 cycles for read 1 ...