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Citations for Illumina :
6501 - 6550 of 7070 citations for WAS Protein Family Member 3 WASF3 Antibody Biotin since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2021Quote: ... a unique indexed sequencing adapter was added to each sample using the Nextera XT Index kit v2 (Illumina, San Diego, California, USA). Then ...
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bioRxiv - Bioengineering 2020Quote: Preparation of phage dAb libraries for deep sequencing was completed following the Illumina Nextera XT amplicon sequencing protocol (Illumina, San Diego, CA). Briefly ...
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bioRxiv - Neuroscience 2021Quote: ... 1 μg of high-quality RNA for each sample was used for library preparation according to the Illumina TruSeq small RNA library protocol (Illumina Inc., CA). Briefly ...
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bioRxiv - Neuroscience 2021Quote: ... Genotyping was performed using single nucleotide polymorphism (SNP) microarrays (Infinium Global Screening Array v2.4. or Infinium OmniExpress-24; Illumina, San Diego, CA). Raw genotype files were converted to PLINK-compatible files using GenomeStudio software (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... A total of 140 pg of the amplified cDNA was fragmented using Nextera XT DNA sample preparation kit (Illumina FC-131-1096) and amplified with Nextera XT indexes (Illumina FC-131-1001) ...
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bioRxiv - Pathology 2021Quote: Genotyping was performed using single nucleotide polymorphism (SNP) microarrays (Infinium Global Screening Array v2.4. or the Infinium OmniExpress-24, Illumina, San Diego CA). Raw genotype files were converted to PLINK-compatible files using GenomeStudio software (Illumina ...
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bioRxiv - Neuroscience 2021Quote: ... Immediately following the cell preparation, the pellet was resuspended in the transposase reaction mix (25 μL 2× TD buffer, 2.5 μL transposase (Illumina, San Diego, USA) and 22.5 μL nuclease-free water) ...
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bioRxiv - Genomics 2021Quote: ... The best replicate from each tissue was selected for the transcriptome data set by preparing TrueSeq libraries (Illumina, San Diego, CA, USA). The rest of the samples were prepared with the Lexogen QuantSeq 3’mRNA kit (Lexogen ...
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bioRxiv - Plant Biology 2021Quote: ... The pooled library was sequenced on an Illumina MiSeq platform using a 2× 300-bp MiSeq Reagent Nano Kit v2 (Illumina, CA, USA).
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bioRxiv - Microbiology 2021Quote: ... The final purified product was quantified using qPCR according to the qPCR Quantification Proto-col Guide (KAPA Library Quantification kits for Illumina Sequencing platforms) and qualified using the LabChip GX HT DNA High Sensitivity Kit (PerkinElmer ...
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bioRxiv - Microbiology 2020Quote: ... 2.5 µg of confirmed DNA-free total RNA was treated with Ribo-Zero rRNA Removal Kit for Bacteria according to the manufacturer’s instructions (Illumina, San Diego, CA). Following rRNA removal ...
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bioRxiv - Molecular Biology 2021Quote: ... All single cell sequencing libraries were generated using 10x Chromium Next GEM v3.1 kits (10x Genomics) and sequencing was performed on a Novaseq6000 system (Illumina, San Diego, California), using an S2 v1.5 100 cycles flow cell (Illumina ...
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bioRxiv - Microbiology 2020Quote: Publicly available data from 158 Achromobacter genomes was downloaded from the NCBI GenBank and Sequence Read Archive (SRA) databases (paired-end Illumina data only) in May 2019 (Table S1) ...
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bioRxiv - Microbiology 2020Quote: ... they were collected and their genomic DNA was pooled and analysed on an Illumina MiSeq bench-top sequencer (Illumina, San Diego, CA). Insertion sites (which included 35% of TA sites ...
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bioRxiv - Cell Biology 2020Quote: ... The remainder of the ATAC-seq library preparation was performed by following manufacturer’s instructions (Nextera DNA Flex Library Prep kit, Illumina, cat. no. 20018704) and the sample quality was validated by BioAnalyzer 2100 (Agilent ...
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bioRxiv - Pathology 2022Quote: ... The RNA resultant from RIP of heart tissue or resultant from NHDF transfection with hnRNPC siRNA and the respective control construct was sequenced on an Illumina Nextseq 550 sequencer (Illumina, CA, USA) to 25-35 million single-end 75bp reads and >50 million paired-end 75 bp reads per sample ...
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bioRxiv - Neuroscience 2022Quote: ... The mRNA sequencing (read length of 2×100 bases) was performed using Illumina HiSeq2000 and 2500 machines (Illumina, San Diego, CA, USA) as per the standard Illumina RNA-seq protocol ...
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bioRxiv - Physiology 2022Quote: ... high-sensitivity spectrofluorometric measurement was poly-A selected and reverse transcribed using Illumina’s TruSeq stranded mRNA library preparation kit (Cat# 20020595; Illumina, San Diego, CA). Each sample was fitted with one of 96 adapters containing a different 8 base molecular barcode for high level multiplexing ...
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bioRxiv - Molecular Biology 2022Quote: ... The supernatant was discarded and the pellet (cell nuclei) was resuspended in 50 uL transposition mix (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Immunology 2022Quote: ... Paired-end next-generation sequencing was performed on the Illumina MiSeq system 500 (2 x250 bp) (Illumina, San Diego, California, United States). TCR sequencing analysis was performed using RTCR as previously described(46).
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bioRxiv - Microbiology 2022Quote: ... Illumina sequencing was performed by MicrobesNG (Birmingham) using the Nextera XT library prep protocol on a MiSeq platform (Illumina, San Diego, USA) and reads were adapter trimmed using Trimmomatic 0.30 with a sliding window quality cutoff of Q15 (32) ...
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bioRxiv - Genomics 2022Quote: ... a library was prepared from 1 μg of genomic DNA and a TruSeq DNA PCR-free Sample Preparation Kit (Illumina, CA, USA). Paired-end (151 bp per read ...
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bioRxiv - Microbiology 2022Quote: ... Bacterial 16S rRNA V4 region was amplified during library preparation via Illumina’s Nextera XT Index Kit v2 (Illumina, Inc.; San Diego, CA) (primers ...
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bioRxiv - Molecular Biology 2022Quote: ... 500 ng of purified RNA in each replicate and condition was used for strand-specific RNA-seq library preparation using the Illumina Stranded mRNA Prep kit (Illumina, Cat. 20040534) and IDT Illumina RNA UD Indexes Set B (Illumina ...
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bioRxiv - Molecular Biology 2022Quote: ... were pooled and RNA extraction/purification was performed for the preparation of sequencing libraries using the Illumina Stranded mRNA Prep kit (Illumina, Cat. 20040534) and IDT Illumina RNA UD Indexes Set B (Illumina ...
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bioRxiv - Microbiology 2022Quote: Genomic DNA of Mtb-positive cultures was purified from cleared lysate and sequenced on NextSeq or MiSeq system (Illumina, San Diego, USA) at the GENEPII sequencing platform of Lyon University Hospital ...
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bioRxiv - Biophysics 2022Quote: ... Whole-genome sequencing was performed on the Illumina NovaSeq platform using Truseq ChIP-seq library and protocols (Illumina, San Diego, CA, USA) with a minimum Phred quality score of 30 ...
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bioRxiv - Cell Biology 2022Quote: ... Samples were diluted and 150 pg input cDNA was used with the Nextera XT DNA Library Preparation Kit (Illumina, San Diego, CA) to generate indexed libraries ...
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bioRxiv - Cell Biology 2021Quote: ... A one-step gentle membrane permeabilization and DNA transposition was performed by adding 50ul transposition mixture (25 uL TD buffer 2X, 2,5uL of transposase TDE1 (Illumina, San Diego, California), 0,5 uL digitonin 0,1% (Promega ...
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bioRxiv - Neuroscience 2021Quote: ... Genome integrity of hiPSC lines was assessed by an Illumina Human CytoSNP-12v2.1 beadchip array and analysed using KaryoStudio software (Illumina, San Diego, CA).
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bioRxiv - Genomics 2020Quote: ... Two μg of genomic DNA from each organism was subjected to indexed-tagged pair-end sequencing on an Illumina Hiseq 2000 platform (Illumina, CA, USA) to generate 100 bp paired-end reads ...
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bioRxiv - Genomics 2020Quote: ... sequencing reads were mapped to reference viral genome sequence and consensus sequence for each sample was built using Dragen RNA pathogen detection software (version 9) in BaseSpace (Illumina Inc, USA). For amplified whole-genome sequencing ...
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bioRxiv - Immunology 2020Quote: ... was used to isolate total RNA that was processed to prepare cDNA libraries using TruSeq technology according to the manufacturer’s instructions protocol (Illumina, San Diego, CA). Libraries were sequenced using Illumina NovaSeq 6000 ...
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bioRxiv - Neuroscience 2021Quote: The method used to amplify RNA was adapted from Abruzzi et al (Abruzzi et al., 2015) and was performed using TruSeq® Small RNA Library Prep kit (Illumina, USA) and following the manufacturer’s instructions ...
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bioRxiv - Microbiology 2020Quote: ... The final pool was sequenced on Illumina MiSeq with a 2×250bp PE Illumina Reagent Kit v2 (Illumina, Inc., San Diego, CA) in the Biotechnology Center at the University of Wisconsin-Madison
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bioRxiv - Microbiology 2021Quote: ... A single library from these samples (Acerv FL 14120) was prepared using the TruSeq DNA PCR-Free kit (Illumina, San Diego, CA) and the remaining samples were prepared using the TruSeq DNA Nano kit (Illumina) ...
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bioRxiv - Cancer Biology 2021Quote: ... Library preparation and RNA-sequencing was performed at the Lausanne Genomic Technologies Facility (LGTF, University of Lausanne; TruSeq Stranded Total RNA Library Kit; Illumina HiSeq 2500). The samples were barcoded and randomized between lanes for sequencing ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared according to Illumina’s protocol for Preparing Libraries for Sequencing on the MiSeq (15039740 Rev. D) and sequencing was conducted using the Illumina MiSeq platform (V2 500 cycles, Illumina MS102-2003) according to the manufacturer’s instructions with modifications found in Kozich et al (2013 ...
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bioRxiv - Microbiology 2022Quote: ... The V4 region of the 16S rRNA gene was amplified from 1 or 7μl DNA and sequenced with a MiSeq (Illumina, San Diego, CA) using the 500 cycle MiSeq Reagent Kit ...
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bioRxiv - Cancer Biology 2022Quote: ... Single-end sequencing (5’ end, 75 bp) was performed at the Cornell Biotechnology Research Center using the NextSeq500 (Illumina, San Diego, CA) platform ...
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bioRxiv - Genomics 2019Quote: ... The library was then sequenced using the Illumina MiSeq platform with a paired-end 300 bp MiSeq reagent kit v3 (Illumina Inc, USA) at the BecA-ILRI Hub in Nairobi ...
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bioRxiv - Microbiology 2020Quote: ... libraries were prepared with Nextera XT DNA Library Preparation Kit69 and paired-end (2×150 bp) sequencing was performed on a NextSeq 500 machine (Illumina Inc., USA) at the George Washington University Genomics Core facility ...
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bioRxiv - Immunology 2020Quote: ... 0.1 ng of cDNA from each cell on the plate was individually tagmented using the Nextera XT kit (Illumina, San Diego, CA) in a final volume of 5 µl ...
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bioRxiv - Genomics 2019Quote: ... Tagmentation of cDNA was performed and sequencing libraries were prepared using the Nextera XT DNA sample preparation kit (Illumina, FC-131-1096) according to the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2019Quote: ... an amount of 2mg of total RNA per sample was processed using Illumina’s RNA Sample Prep Kit following the manufacturer’s instruction (Illumina, San Diego, CA, USA). All single drugs were processed together and multiplexed onto one lane to minimize the batch effect ...
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Dendritic cells focus CTL responses toward highly conserved and topologically important HIV epitopesbioRxiv - Immunology 2020Quote: ... DNA was extracted from PBMC and full-length HLA genes were sequenced by NGS on the MiSeq platform (Illumina, San Diego, CA). FASTQ files generated by MiSeq Reporter were analyzed by NGSengine v2.16.2 (GenDX ...
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bioRxiv - Genomics 2019Quote: ... Second, the pellet was resuspended in the transposase reaction mix (25 μl 2× TD buffer, 2.5 μl transposase (Illumina, FC-121-1030) and 22.5 μl nuclease-free water) ...
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bioRxiv - Genomics 2020Quote: ... WGS was performed at the New York Genome Center and the Northwest Genomics Center on a HiSeqX system (Illumina, San Diego, CA) using a paired□end read length of 150 base pairs ...
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bioRxiv - Cancer Biology 2019Quote: ... 50ng of gDNA was used as the input and the sequencing libraries were prepared using the Illumina® Nextera Rapid Capture Enrichment kit (Illumina Inc.). The steps included tagmentation of gDNA ...
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bioRxiv - Molecular Biology 2019Quote: ... Sequencing was performed on the Illumina HiSeq 4000 single end 100 bp using the TruSeq SBS Kit HS4000 (Illumina, Inc, California, USA). Reads were aligned to the reference genome (ensembl version 82 ...