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Citations for Illumina :
5651 - 5700 of 7070 citations for WAS Protein Family Member 3 WASF3 Antibody Biotin since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: ... A library was prepared using a TruSeq DNA PCR-Free library preparation kit according to manufacturer guidance and was sequenced on a NextSeq500 instrument (Illumina) with a NextSeq High Output v2 300 cycle kit ...
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Core Microbiota Drive the Prevalence of Extracellular Antibiotic Resistome in the Water CompartmentsbioRxiv - Microbiology 2022Quote: ... Paired-end sequencing (2 × 300 bp) of purified amplicons was realized on an Illumina MiSeq platform (Illumina, San Diego, USA) based on the standard protocols (Majorbio Bio-Pharm Technology Co ...
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bioRxiv - Microbiology 2022Quote: ... Illumina sequencing was performed using the Nextera XT library prep protocol on a HiSeq platform (Illumina, San Diego, CA, USA) using a 250bp paired end protocol ...
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bioRxiv - Microbiology 2022Quote: ... Messenger RNA was enriched by first depleting ribosomal RNA from samples using the Ribo-Zero rRNA removal (bacteria) magnetic kit (Illumina). The purified mRNA was prepared for Illumina sequencing using the NEBNext Ultra RNA Library Prep Kit for Illumina according to the manufacturer’s instructions in combination with AMPure XP reagent for clean-up of adaptor-ligated DNA ...
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bioRxiv - Genomics 2022Quote: ... The bisulfite converted sperm DNA was hybridized to Illumina Infinium HumanMethylationEPIC microarrays and ran as recommended by the manufacturer (Illumina) at Infinity BiologiX.
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bioRxiv - Genomics 2022Quote: ... Illumina library prep was performed using Nextera DNA Flex Library Preparation kit (cat no. 20018704) and sequenced on the iSeq100 (Illumina).
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bioRxiv - Genomics 2022Quote: ... A paired-end library was prepared with the TruSeq DNA PCR-Free LT Sample Preparation Kit (Illumina, #FC-121-3001) from 1 µg of the genomic DNA ...
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bioRxiv - Cancer Biology 2022Quote: ... The targeted amplicon library was subsequently spiked into the remainder of the 10x library to be sequenced together on a NovaSeq (Illumina). The cycle settings were as follows ...
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bioRxiv - Microbiology 2022Quote: ... Further library preparation of rRNA-depleted samples was performed using TruSeq Stranded mRNA library preparation kit (Illumina, RS-122-2101) according to the manufacturer’s instructions apart from omitting the initial steps for mRNA pull-down ...
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bioRxiv - Microbiology 2022Quote: ... a PhiX spike-in of 2.5–5% was added to the pools (PhiX sequencing control v3; Illumina FC-110-3001). Samples were run on the Illumina NovaSeq 6000 platform (single-read 1 ×85 cycles and 6 × i7 index cycles).
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bioRxiv - Plant Biology 2022Quote: ... RNA sequencing was next conducted after establishing sequencing libraries using an IlluminaXten sequencing system (Illumina Inc., San Diego, CA, USA) as per the manufacturer’s instructions.
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bioRxiv - Evolutionary Biology 2022Quote: ... Sequencing was performed on a MiSeq system with the reagent kit v3 with 600 cycles (Illumina, San Diego, CA, USA) as recommended by the manufacturer and resulted in a minimum average coverage of 88× per strain (coverage range was from 88× to 157×) ...
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bioRxiv - Cancer Biology 2022Quote: ... Final quality control by qPCR was performed by the sequencing provider before paired-end 150 nt sequencing on a NovaSeq6000 S4 (Illumina). The sequencing results exceeded 312Gbp ...
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bioRxiv - Genetics 2022Quote: ... and the genotyping process was performed using a genotyping-by-sequencing (GBS) protocol (Elshire et al., 2011) with EcoT22I restriction enzyme followed by Illumina sequencing using the HiSeq platform for Pop3 and the GAIIx platform for Pop1 and Pop2 (Souza et al. ...
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bioRxiv - Immunology 2022Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2022Quote: ... the ADT fraction was amplified for 10 cycles with SI-PCR oligo (10x Genomics) and TruSeq Small RNA RPI-x (Illumina) primers to index the samples ...
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bioRxiv - Cancer Biology 2022Quote: ... Equimolar pooling of libraries was performed based on QC values and sequenced on an Illumina® HiSeq (Illumina, California, USA) with a read length configuration of 150 PE for 50M PE reads (25M in each direction ...
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bioRxiv - Cell Biology 2022Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot- HS (Illumina) according to the manufacturer’s instructions.
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bioRxiv - Neuroscience 2021Quote: ... ~600 pg of purified cDNA was used to produce a RNA-seq library using Nextera XT DNA Library Preparation kit (FC-131-1024, Illumina), following the manufacturer instructions.
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bioRxiv - Molecular Biology 2020Quote: One μg of total RNA of high quality (RIN>8) was used for sequencing with a TruSeq RNA sample preparation kit (Illumina). We here included 99 islet samples in addition to the 89 islet samples and processed them uniformly following the same protocol as described previously (8) ...
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bioRxiv - Genomics 2020Quote: The Gene Expression Omnibus (GEO) Datasets repository [50] was interrogated using “GPL13534” (the accession code of the platform HumanMethylation450 BeadChip, Illumina) and “blood” as search terms ...
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bioRxiv - Microbiology 2020Quote: Clustering of index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v4-cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2020Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina), and the library preparations were then sequenced on an Illumina NovaSeq 6000 platform and 150 bp paired-end reads were generated ...
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bioRxiv - Microbiology 2020Quote: ... Biological triplicate samples for each strain were then pooled at equal RNA concentrations and ribosomal RNA was removed using a Ribo-Zero Kit for Gram Positive Bacteria (Illumina). Following this ...
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bioRxiv - Microbiology 2021Quote: ... DNA integrity was confirmed by gel electrophoresis and used for Illumina whole genome sequencing (see section: Illumina whole genome sequencing). Sequence reads were quality filtered using fastp (v0.20.1)50 and reads were aligned using bowtie2 (v2.3.5.1)52 to reference genomes and phagemid sequences ...
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bioRxiv - Microbiology 2021Quote: ... Library preparation and sequencing was carried out by MR DNA following Illumina library preparation protocols using MiSeq Reagent Kit v3 (Illumina).
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bioRxiv - Neuroscience 2020Quote: ... Five hundred ng of RNA per sample was used to prepare a dual-indexed strand-specific cDNA library using TruSeq Stranded mRNA library Prep Kit (Illumina). The resulting libraries were assessed for their quality and size distribution using Qubind Agilent 2100 Bioanalyzer ...
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bioRxiv - Developmental Biology 2021Quote: ... Sequencing of 12 liver samples (with 84 unrelated samples) was performed using a single NovaSeq S1 200 cycle sequencing run on a NovaSeq 6000 machine (Illumina) through IMB Sequencing Facility ...
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bioRxiv - Developmental Biology 2020Quote: ... DNA was then bisulfite-treated according to standard protocols and loaded onto Infinium HumanMethylation450 BeadChip arrays (Illumina, San Diego, CA). Array images were scanned and raw methylation intensities were normalized and subjected to quality control according to cohort-specific procedures ...
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bioRxiv - Cancer Biology 2020Quote: ... then 60 ng was used for library preparation using KAPA Stranded RNA-Seq Library Preparation Kit (Illumina, KR0934 – v 1.13). The samples were barcoded and pooled in sets of eight per run to generate paired 150-bp reads with NextSeq 550 Sequencing System (Illumina) ...
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bioRxiv - Cancer Biology 2021Quote: ... Tumor DNA was isolated using the Qiagen Blood and Tissue Kit and sgRNA cassette was amplified similarly to the in vitro screen and analyzed by Illumina sequencing ...
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bioRxiv - Microbiology 2021Quote: ... The library was sequenced as 75-bp paired-end reads using an Illumina NextSeq 500 system (Illumina, San Diego, CA). The Bauer Core Facility at Harvard University performed all genome sequencing.
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bioRxiv - Microbiology 2021Quote: ... The library was sequenced as 150-bp paired-end reads using an Illumina NextSeq 500 system (Illumina, San Diego, CA) by the Bauer Core Facility ...
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bioRxiv - Microbiology 2021Quote: ... On-board cluster generation and paired-end sequencing was completed on the NextSeq 550 (Ilumina) using a High Output 150 cycle kit (Illumina). The average cluster density was 177 k/mm2 resulting in 420 million reads passing filter per run ...
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bioRxiv - Molecular Biology 2019Quote: Genomic DNA for whole-genome sequencing (WGS) analysis was isolated directly from bacterial colonies using the Nextera DNA Flex Microbial Colony Extraction kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2020Quote: ... Each library was adjusted to a concentration of 20 pM and was sequenced with a MiSeq Reagent kit v3 for 150 cycles by an Illumina MiSeq Sequencing System (Illumina). An efficiency of 25 million sequence reads per flow cell was achieved.
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bioRxiv - Cancer Biology 2019Quote: ... tagmentation was carried out on double-stranded cDNA using the Nextera XT Library Sample Preparation kit (Illumina, FC-131-1096). Each well was mixed with 0.8 µl Nextera tagmentation DNA buffer (Illumina ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequencing (2×100bp) was performed with Illumina NovaSeq 6000 sequencing platform on a SP flowcell (Illumina, ref: 20040326).
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bioRxiv - Neuroscience 2020Quote: ... The remaining batch was prepared with the TruSeq RNA Exome sample prep kit (formerly the TruSeq RNA Access sample prep kit; Illumina). All libraries were randomly pooled to multiplex 24 samples per lane using Illumina TruSeq barcodes ...
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bioRxiv - Microbiology 2021Quote: ... The library was prepared using Nextera DNA Flex library preparation kit according to the manufacturer’s instructions (Illumina, San Diego, CA). The library was diluted to 1.0nM ...
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bioRxiv - Microbiology 2021Quote: ... cDNA library was prepared by using NEB Next Ultra RNA Library Prep Kit for Illumina (New England Biolab, Cat# E7530) and whole genome sequencing was performed by Miseq (Illumina).
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bioRxiv - Evolutionary Biology 2021Quote: ... A paired-end Illumina library (DRR029460; see also Supplementary File 1) was constructed using a TruSeq Stranded mRNA LT Sample Prep Kit (Illumina) and an RNA sample extracted from an E ...
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bioRxiv - Microbiology 2021Quote: ... Next-generation sequencing was performed using a Nextera XT DNA library preparation kit and the NextSeq 500 sequencing systems (Illumina) at the Mutualized Platform for Microbiology (P2M ...
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bioRxiv - Cancer Biology 2021Quote: ... The sequencing library was generated by PCR and used to produce the clusters thereafter sequenced on NovaSeq 6000 System (Illumina). Each sample was sequenced in a separate flow cell lane ...
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bioRxiv - Microbiology 2021Quote: ... Library for Illumina sequencing (insert size of 500-900 bp) was prepared using Nextera XT DNA Library Prep Kit (Illumina) and paired-end sequencing (2 x 150 bp ...
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bioRxiv - Microbiology 2021Quote: ... bacterial and eukaryotic rRNA was removed using the Ribo-Zero Gold rRNA Removal Kit (Epidemiology) (Illumina, San Diego, CA, USA) following the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2020Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using HiSeq PE Cluster Kit cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2020Quote: ... then the second-stage PCR was performed to attach Illumina i7 and i5 indexes (Illumina Nextera XT Library Preparation Kit) to individual samples ...
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bioRxiv - Neuroscience 2022Quote: ... Clustering of the index-coded samples was performed on a cBot Cluster Generation System using a PE Cluster Kit cBot-HS (Illumina). After cluster generation ...
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bioRxiv - Pharmacology and Toxicology 2022Quote: ... The sequencing library was prepared using the Illumina TruSeq RNA Sample Prep Kit (FC-122-1001; Illumina, San Diego, CA) with 1 ug of total RNA ...