Labshake search
Citations for Illumina :
5601 - 5650 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2023Quote: ... with a single read for 36 bp and mapped against the reference Mouse_NCBI37.1_AllChromosomes using eland_extended by Illumina pipeline 1.7.0.
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bioRxiv - Cell Biology 2023Quote: ... Purified ChIP-DNA was prepared for sequencing according to the Illumina protocol and sequenced on a HiSeq 2000 sequencer (Illumina) with a single read for 36 bp and mapped against the reference Mouse_NCBI37.1_AllChromosomes using eland_extended by Illumina pipeline 1.7.0.
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bioRxiv - Cell Biology 2023Quote: RNA-seq libraries were prepared with TruSeq Stranded mRNA Library Prep Kit (Illumina, RS-122-2101) following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2023Quote: ... Normalized libraries were pooled and sequenced using a NextSeq 500/550 Mid OutputKit v2.5 (Illumina, San Diego, CA, USA) with 150 cycles (2 × 75 bp paired-end ...
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bioRxiv - Cell Biology 2023Quote: ... Samples with an RNA integrity number of > 9 were used for construction of a complementary DNA library by an Illumina TruSeq kit (Illumina, San Diego, CA). The sequencing strategy was 100 bp paired-end by an Illumina HiSeq 4000 ...
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bioRxiv - Developmental Biology 2023Quote: ... Samples were sequenced either on Illumina Hiseq4000 (150 paired end) (Illumina, San Diego, CA, USA) or Illumina Nextseq2000 (150 paired end ...
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bioRxiv - Developmental Biology 2023Quote: ... Sequencing was performed using NovaSeq 6000 system (20012850, Illumina). Alignment of reads was performed using the STAR software (Dobin et al. ...
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bioRxiv - Developmental Biology 2023Quote: ... 2 μl amplified cDNA was tagmented in 1x Tagmentation Buffer using 0.8 μl bead-linked transposome (Illumina DNA Prep, (M) Tagmentation ...
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bioRxiv - Bioengineering 2023Quote: ... Base calling was done by Illumina Real Time Analysis (RTA ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2022) sequenced 20 vaquita porpoise (Phocoena sinus) whole genomes from the Gulf of California to 60x coverage (Illumina HiSeqX). They mapped reads to the vaquita reference genome (mPhoSin1.pri ...
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bioRxiv - Evolutionary Biology 2023Quote: ... we performed 150-bp paired-end sequencing of these mRNA libraries (RNA-seq) using Illumina NovaSeq6000 (Illumina).
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bioRxiv - Evolutionary Biology 2023Quote: ... (in press) sequenced 50 fin whale (Balaenoptera physalus) whole genomes (20x coverage; Illumina HiSeqX and NovaSeq6000) from two populations ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2022) sequenced 2,504 human genomes to 30x coverage (Illumina NovaSeq 6000). They mapped these data to the human genome assembly GRCh38 and called genotypes using GATK HaplotypeCaller ...
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bioRxiv - Evolutionary Biology 2023Quote: ... sequencing libraries were constructed (Illumina, San Diego, CA, USA). Additionally ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2016) sequenced mouse whole genomes to 11-26x coverage (Illumina HiSeq 2000) from natural populations of house mouse (Mus musculus) ...
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bioRxiv - Cell Biology 2023Quote: ... Sequencing was performed on HiSeq 2500 with Rapid V2 chemistry SR 65 cycles (Illumina) using two different flow cells loaded at 2pM and with 3% Phix ...
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bioRxiv - Cell Biology 2023Quote: ... and 5-day deligated samples were sequenced (the ligated sample was sequenced on the Illumina Nextseq500 and all others were sequenced on the Illumina Nextseq2000), and initial processing of the datasets was performed at the Center for Functional Genomics at the University at Albany ...
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bioRxiv - Cell Biology 2023Quote: ... and 5-day deligated samples were sequenced (the ligated sample was sequenced on the Illumina Nextseq500 and all others were sequenced on the Illumina Nextseq2000) ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were prepared from 500 ng of RNA using the TruSeq stranded mRNA Library Prep (Illumina; #20020594) according to the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2023Quote: ... and sequenced on the Illumina NovaSeq 6000 system (Illumina, USA) according to the manufacturer’s instructions.
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bioRxiv - Cell Biology 2023Quote: The PCR primers introduce the full-length adaptor sequence required for Illumina sequencing (for details see Illumina small RNA PCR primers). PCR was performed in 12.5 μL using half of the ranhexRT sample as a template [1× KAPA HiFi HotStart ReadyMix (KapaBiosystems KK2602) ...
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bioRxiv - Developmental Biology 2023Quote: ... Genotyping array was performed using Infinium Global Screening Array -24 v3.0 (Illumina) to evaluate genome integrity.
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bioRxiv - Cell Biology 2023Quote: ... The amplified fragmented cDNA of 300 bp in size were sequenced in single-end mode using the NovaSeq500 (Illumina) with a read length of 100 bp.
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bioRxiv - Cell Biology 2023Quote: ... The amplified fragmented cDNA of ∼200 bp in size were sequenced in paired-end mode using the HiSeq 1000 (Illumina) with a read length of 2×100 bp ...
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bioRxiv - Cell Biology 2023Quote: ... Total RNA (500 ng) from each sample was prepared using TruSeq RNA sample prep reagents (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2023Quote: ... The pool (F0 samples) and the hybrid F1 sample were both sequenced on Illumina NextSeq500 (Illumina, San Diego, CA, USA) using a MID output kit and reading 2 x 150 bases ...
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bioRxiv - Developmental Biology 2023Quote: ... The pool was sequenced on Illumina NextSeq2000 (Illumina, San Diego, CA, USA) using a P3 flowcell and reading 2 x 150 bases ...
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bioRxiv - Developmental Biology 2023Quote: ... or Illumina Nextseq2000 (150 paired end) (Illumina, San Diego, CA, USA). All sequencing data is deposited at the ENA under study number:
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bioRxiv - Developmental Biology 2023Quote: ... The libraries were sequenced on the NovaSeq system (Illumina) using the NovaSeq® 6000 S1 Kits v1.5 (300 cycles ...
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bioRxiv - Developmental Biology 2023Quote: ... using the NovaSeq® 6000 S4 Kits v1.5 (35 cycles; Cat# 20044417, Illumina) performed by Azenta Life Science ...
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bioRxiv - Bioengineering 2023Quote: ... with poly(A) selection and sequenced on a NovaSeq 6000 (Illumina, San Diego, USA) with 40M 150bp paired-end reads per sample.
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bioRxiv - Cell Biology 2023Quote: ... Sequencing was performed on NovaSeq 6000 platform using a 200 cycles SP Reagent Kit v1.5 (both Illumina) at a loading concentration of 1.85 nM ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced on 2×150 Miseq (Illumina). Clonal abundances were estimated using a pipeline adapted from 110 ...
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bioRxiv - Cancer Biology 2023Quote: The libraries were sequenced with paired-end 50 bps on the NovaSeq 6000 Sequencer (Illumina, USA). The raw sequencing reads in BCL format was processed through bcl2fastq 2.20 (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... The raw sequencing reads in BCL format was processed through bcl2fastq 2.20 (Illumina) for FASTQ conversion and demultiplexing ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were loaded on a NextSeq 550 (Illumina) and sequencing was performed using the NextSeq High Output Kit (150 cycles ...
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bioRxiv - Cancer Biology 2023Quote: ... which were then treated with 2.5ul of Tn5 transposase (Illumina 20034197) for DNA tagmentation ...
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bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed on a NextSeq 2000 platform (Illumina; #20038897) using NextSeq 1000/2000 P2 Reagents for 100 cycles (Illumina ...
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bioRxiv - Biophysics 2023Quote: ... 39 pmol of dsDNA was mixed with 36 pmol PhiX (Illumina) for sequencing ...
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bioRxiv - Cancer Biology 2023Quote: ... The libraries were paired-end sequenced using Illumina HiSeq X Ten sequencer (Illumina, San Diego, USA) for 150 cycles following the manufacturer’s instructions.
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bioRxiv - Cancer Biology 2023Quote: Raw reads obtained from Illumina HiSeq X Ten sequencing for 48 samples were processed using Trim Galore-v0.4.01to generate high-quality reads by removing adapters ...
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bioRxiv - Cancer Biology 2023Quote: ... Fixed cells were transposed using barcoded Tn5 (Seqwell) in a transposition buffer (1 × TD buffer from Illumina Nextera kit ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced on the Nova-seq platform (Illumina) using a 200-cycle S1 kit and the following read protocol ...
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bioRxiv - Cancer Biology 2023Quote: Human RNA sequencing data and DNA sequencing data (Illumina HiSeq RNASeqV2) from the Colorectal Adenocarcinoma dataset from the TCGA Nature 2012 and TCGA PanCancer Atlas from The Cancer Genome Atlas were downloaded from cBioPortal for Cancer Genomics (https://www.cbioportal.org/).57–59 Data was log2 transformed and analyzed using the DESeq2 package in R (v3.0).60
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bioRxiv - Cancer Biology 2023Quote: ... The transposition reaction was performed using Tagment DNA TDE1 Enzyme and Buffer Kit (Illumina) and 4.7 µL TDE1 Tagment DNA enzyme per sample in a 50-µL total reaction volume ...
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bioRxiv - Cancer Biology 2023Quote: ... (M) Tagmentation Kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... using NextSeq 1000/2000 P2 Reagents for 100 cycles (Illumina; #20046811). Libraries were combined in an equimolar pool and run on a P2 flow cell ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced by using 75 bp paired-end reads on the NextSeq500 platform (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... The raw image file from Illumina (HiSeq PE150) was transformed to Sequence Reads by CASAVA base recognition and stored in FASTQ (fq ...
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bioRxiv - Cancer Biology 2023Quote: ... followed by library preparation (using Illumina TruSeq Stranded mRNA Library method) and paired-end sequencing on NovaSeq with a 150bp readlength and more than 25M reads were recorded for each sample ...