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Citations for Covaris :
801 - 850 of 1249 citations since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2021Quote: ... The genomic DNA was sheared (~300bp) by Covaris™ Focused-ultrasonicator (Thermo Fisher Scientific™) ...
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bioRxiv - Cancer Biology 2021Quote: ... 200 cycles per burst for 30 min at 4° C to obtain 100-500 base pair chromatin fragments (Covaris, Woburn, CA). Nuclear sheared lysates were clarified by centrifugation at 15,000 x g for 10 min at 4° C ...
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bioRxiv - Cancer Biology 2021Quote: ... Genomic DNA was sheared using an S2 Ultrasonicator (Covaris, Woburn, MA, USA). Whole-genome sequencing and library preparations for tumors and matched germline controls were performed according to the manufacturer’s instructions (Illumina ...
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bioRxiv - Cell Biology 2021Quote: ... Chromatin was prepared with truChIP™ Chromatin Shearing Reagent Kit (Covaris 520154) and sheared with Covaris S220 according to the kit manual ...
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bioRxiv - Plant Biology 2021Quote: ... genomic DNA was isolated from 4-mm leaf punches using the Sbeadex Maxi Plant kit (LGC Genomics) then randomly sheared to an average size of ∼400bps with a Covaris E210 ultrasonicator (Covaris). Indexed Illumina genomic libraries were generated with the KAPA HTP Library Preparation Kit (Roche) ...
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bioRxiv - Plant Biology 2021Quote: ... the gDNA samples (800 ng/library) were sonicated into 200 bp fragments on a focused ultrasonicator (Covaris). The gDNA library then underwent end-repair ...
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bioRxiv - Plant Biology 2021Quote: ... cDNA was sheared to 200–500 bp size by Covaris AFA system and constructed with sequencing adaptors by ThruPLEX DNA-Seq Kit.
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bioRxiv - Neuroscience 2021Quote: ... Samples were sonicated in a 96 Place microTUBE Rack (Covaris cat#500282) using a Covaris E220 for 12 cycles with the following setting – time 60 s ...
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bioRxiv - Cell Biology 2021Quote: ... performed fragmentation to 200–400 bp using an M220 Focused-ultrasonicator (Covaris), captured the 5’-prime fragments ...
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bioRxiv - Cell Biology 2021Quote: ... the ligated DNA was fragmented into 300bp using an S220 Focused-ultrasonicator (Covaris), and the biotin-labeled DNA fragments were enriched by Dynabeads M280 beads (Thermo Fisher) ...
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bioRxiv - Plant Biology 2021Quote: ... and 1μg of DNA sheared using a Covaris S2 sonicator (Covaris) to produce 350bp inserts ...
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bioRxiv - Plant Biology 2021Quote: ... sonication was performed using a Covaris S2 ultrasonicator (Covaris, Inc., Woburn, MA). The lysate was centrifuged at 13,000×g for 3 min at 4°C to remove any debris ...
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bioRxiv - Plant Biology 2021Quote: ... samples were sheared to an average fragment size of 600 bp using a Covaris S220 sonicator (Covaris, Woburn, MA, USA). Upon shearing ...
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bioRxiv - Microbiology 2021Quote: ... DNA was sheared using a Covaris S2 ultrasonicator (Covaris, USA), and fragment libraries prepared using a NEBNext Ultra II DNA Library Prep Kit for Illumina (New England BioLabs ...
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bioRxiv - Microbiology 2021Quote: ... g-Tube (Covaris, catalog# 520079) was used for shearing high-molecular-weight DNA into 20kb fragments followed by purification with AMPure XP beads (Beckman ...
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bioRxiv - Genomics 2021Quote: ... and 0.5 ng of all-C hydroxymethylated pUC19 plasmid DNA (Wisegene) and sonicated to ∼300 bp fragments using a M220 focused ultrasonicator (Covaris), with the following parameters ...
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bioRxiv - Genomics 2021Quote: ... and sonicated to ∼300 bp fragments using a M220 focused ultrasonicator (Covaris) with the following parameters ...
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bioRxiv - Genetics 2021Quote: ... SF/CamEiJ and SKIVE/EiJ mice was sheared into fragments of approximately 200 bp with the Covaris E220 system (Covaris, USA). The sheared DNA fragments were then purified for each of the 16 mice strains using AMPure XP Beads (Beckman ...
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bioRxiv - Microbiology 2021Quote: 40 ng of each plasmid DNA was sheared into approximately 350 base pair in length by sonication using a Covaris Sonicator LE220 (Covaris). Fragmented DNA was uniquely index tagged with NEBNext Multiplex Oligos for Illumina (New England Bio-Labs ...
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bioRxiv - Microbiology 2021Quote: ... the DNA was fragmented by sonication (Covaris S2) until the DNA was sheared to 220-250 bp ...
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bioRxiv - Physiology 2021Quote: ... and snap-frozen in liquid nitrogen before cryofracture using the CP02 cryoPREP Automated Dry pulverizer (Covaris) and were then stored in dry ice.
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bioRxiv - Microbiology 2021Quote: ... Genomic DNA was sheared to 3 kb using a Covaris LS220 (Covaris Inc., Woburn, MA, USA) or 15 kb (for stationary phase samples and bacteroids isolated from dnf mutant nodules and the matched wild-type A17 sample ...
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bioRxiv - Microbiology 2021Quote: ... or 15 kb (for stationary phase samples and bacteroids isolated from dnf mutant nodules and the matched wild-type A17 sample) using g-TUBEs (Covaris Inc., Woburn, MA, USA). Sheared DNA was treated with exonuclease to remove single-stranded ends and DNA damage repair mix followed by end repair and ligation of barcoded blunt adapters using SMRTbell Template Prep Kit 2.0 (PacBio ...
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bioRxiv - Genomics 2021Quote: ... 2 µg of each gDNA were sheared using a Covaris M220 Focused-ultrasonicator (Covaris, Inc. Woburn, MA, USA), end-repaired ...
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bioRxiv - Genomics 2021Quote: ... cells were resuspended in nuclei lysis buffer and sonicated using an AFA sonicator (Covaris). Immunoprecipitation was performed using a H3K27ac antibody (Abcam ...
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bioRxiv - Microbiology 2021Quote: ... DNA fragmentation was done using G-tubes (Covaris). SMRTbell DNA template libraries were prepared according to the manufacturer’s specification (PacBio ...
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bioRxiv - Microbiology 2021Quote: ... and 200 ng of DNA was sheared to 1 kb fragments using Covaris M220 and micro- TUBE according to the manufacturer’s recommended settings (Covaris, Woburn, MA). HIV-1 insertion site libraries were prepared and sequenced using methods described previously (44) ...
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bioRxiv - Plant Biology 2021Quote: ... the extracted chromatin was fragmented into a mean size of 300 bp using a sonicator (Covaris S220). Hi-C libraries were constructed with NEB Next Multiplex Oligos kit and KAPA Hyper Prep Kit ...
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bioRxiv - Molecular Biology 2021Quote: ... 0.5 mM PMSF) and briefly sonicated (Covaris S220 Focused-ultrasonicator). Samples were cleared by centrifugation and protein concentrations were determined using a Bradford assay (BioRad) ...
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bioRxiv - Molecular Biology 2021Quote: ... was sheared using an M220 ultrasound sonicator (Covaris) to an average size of 350 bp ...
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bioRxiv - Cell Biology 2021Quote: ... Up to 2000 ng of double-stranded genomic DNA was fragmented by Covaris shearing to obtain fragment sizes of 160-180 bp ...
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bioRxiv - Cell Biology 2021Quote: ... from fragmented genomic DNA sheared by Covaris LE220 (Covaris, Brighton, UK). For WES ...
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bioRxiv - Pathology 2021Quote: ... fragmentation was achieved by ultrasonication on a Covaris M220 (Covaris, Brighton, UK). Subsequently ...
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bioRxiv - Cell Biology 2021Quote: ... Cell lysates were sonicated in a 96 microTUBE Rack (Covaris, #500282) using a Covaris E220 for 22 cycles with the following settings ...
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bioRxiv - Biophysics 2021Quote: ... The genomic DNA is randomly fragmented to a size of 350 bp by Covaris cracker ...
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bioRxiv - Genomics 2021Quote: ... one with DNA fragmented to 12kb with a gTube (520079, Covaris). DNA ends were FFPE repaired and end-prepped/dA-tailed using the NEBNext FFPE DNA Repair kit (M6630 ...
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bioRxiv - Genomics 2021Quote: ... The purified genomic DNA purified was fragmented with a Covaris S2 sonicator (Covaris), size-selected with BluePippin (Sage Science) ...
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bioRxiv - Cancer Biology 2021Quote: ... and was sheared using an E220 Covaris instrument (Covaris Inc., Woburn, MA, USA). Size selection was subsequently performed using a Vahstm DNA Clean beads kit (Vazyme ...
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bioRxiv - Cell Biology 2021Quote: ... Each was brought to 5% SDS by volume (~1 ml total final volume) and subjected to complete lysis and DNA shearing using a Covaris Model S220 Focused Acoustic device (Covaris, Woburn MA) in 1ml glass Covaris vials ...
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bioRxiv - Cell Biology 2021Quote: ... Pellets were sonicated in a Covaris E210 instrument (Covaris, Inc., Woburn, MA) using the following parameters ...
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bioRxiv - Genomics 2021Quote: ... we liquid nitrogen pulverized all dissected tissue into a fine powder using a cryoPREP® (Covaris) dry pulverizer (three impacts to a TT05 tissueTUBETM on intensity setting three ...
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bioRxiv - Cancer Biology 2021Quote: ... 150-300 ng of DNA was fragmented to approximately 200 bp using a focal acoustic device (Covaris S2, Sage Sciences). Libraries and hybridization capture were performed following the SureSelectXT HS recommended protocol with SureSelect Human All Exon V6+UTR baits (Agilent) ...
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bioRxiv - Cancer Biology 2021Quote: ... Shearing of chromatin was performed using truChIP Chromatin Shearing Reagent Kit (Covaris) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2021Quote: ... Shearing of chromatin was performed using truChIP Chromatin Shearing Reagent Kit (Covaris) according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2021Quote: A total amount of 5.2 µg genomic DNA spiked with 26 ng lambda DNA was fragmented by sonication to lengths of 200-400 bp with a Covaris S220 (Covaris, Woburn, MA, USA), followed by end-repair and adenylation ...
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bioRxiv - Plant Biology 2021Quote: ... Nuclei were isolated and then chromatin was sheared in 130 mL tubes (Covaris). Shearing was performed on a Covaris S220 sonicator for 5 minutes at a cycle/burst of 200 ...
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bioRxiv - Microbiology 2021Quote: ... Genomic DNA was fragmented by ultrasound on Covaris S/E210 (Covaris, Brighton, UK) according to the manufacturer’s recommendations and was subsequently used for library preparation as previously described (37) ...
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bioRxiv - Microbiology 2021Quote: ... Genomic DNA (5-10 µg) samples were sheared to an average size of 20 kbp via G-tube (Covaris; Woburn, MA, USA), end repaired and ligated to hairpin barcoded adapters prior to sequencing ...
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bioRxiv - Pharmacology and Toxicology 2021Quote: Liver samples were weighed and individually cryo-pulverized using a Cryoprep device (CP02, Covaris). The lyophilized samples from each tissue were aliquoted to separate tubes (50 mg for proteomic analysis and 20 mg for lipidomic analysis ...
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bioRxiv - Microbiology 2021Quote: ... And then DNAs were cleaved into 50∼800 bp fragments by the Covaris E220 ultrasonicator (Covaris, Brighton, UK) and some fragments between 150∼250 bp were selected using AMPure XP beads (Agencourt ...