Labshake search
Citations for PacBio :
51 - 100 of 128 citations for Genz 644282 CAS 529488 28 6 99% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2020Quote: ... Sequence libraries were prepared using the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA). The size selection of the library was performed by BluePippin (Sage Science ...
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bioRxiv - Plant Biology 2021Quote: ... SMRT sequence libraries were constructed with an SMRTbell Express Template Prep Kit (PacBio, Menlo Park, CA, USA) and used for sequencing on a PacBio Sequel system (PacBio) ...
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bioRxiv - Genomics 2020Quote: ... a SMRT library was constructed with SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) in accordance with the manufacture’s protocol and sequenced with SMRT Cell v2.1 on a Sequel System (PacBio) ...
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bioRxiv - Microbiology 2021Quote: ... SMRTbell template libraries were prepared using a Sequel II Binding Kit 2.0 (PacBio, Menlo Park, CA, USA), and then sequenced on a Sequel II instrument using the tbd-sample dependent sequencing primer ...
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bioRxiv - Evolutionary Biology 2022Quote: ... they constructed a PacBio SMRTbell library (∼20kb) using the SMRTbell Template Prep Kit 1.0 (PacBio, CA, USA) following the manufacturer recommended protocol ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Real-Time (SMRT) library using SMRTbell Express Template Prep Kit v2.0 (PacBio, CA; Cat. #100-938-900). We sheared HMW gDNA to a target DNA size distribution between 15 – 20 kb and concentrated it using 0.45X of AMPure PB beads (PacBio ...
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bioRxiv - Plant Biology 2023Quote: ... the DNA was sheared using Diagenode Megaruptor system and concentrated with AMPure PB Beads (PacBio, CA, USA). The libraries were size selected on a BluePippin System ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Genomic libraries were constructed using the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA). PacBio HiFi whole-genome sequencing in circular consensus sequencing (ccs ...
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bioRxiv - Molecular Biology 2023Quote: ... Then libraries were prepared (100-938-900, SMRTbell® express template prep kit 2.0, PacBio, CA, USA) and sequenced on the PacBio Sequel II (PacBio ...
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bioRxiv - Genomics 2024Quote: ... Fragmented DNA in the extracted DNA was removed using the Short Read Eliminator Kit (PacBio, CA, US). The sequencing library for long-read sequencing was prepared using the Ligation Sequencing Kit (SQK-LSK109 ...
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bioRxiv - Evolutionary Biology 2021Quote: ... A 20kb SMRTbell template library was constructed for each pool separately and sequenced individually on the PacBio Sequel system using 3 PacBio SMRT® sequencing cells per library (6 PacBio SMRT® sequencing cells in total)(Macrogen Europe) ...
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bioRxiv - Genomics 2020Quote: ... an SMRT sequence library was constructed with an SMRTbell Express Template Prep Kit (PacBio, Menlo Park, CA, USA) and sequenced on a PacBio Sequel system (PacBio) ...
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bioRxiv - Evolutionary Biology 2024Quote: ... HMW gDNA for long-read sequencing was extracted using the Nanobind tissue kit (PacBio, Menlo Park, CA, USA) following the application note for isolation of HMW DNA from frozen tilapia testis tissue.
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bioRxiv - Genomics 2022Quote: Raw subreads were collapsed into Circular Consensus Sequence (CCS) reads using ccs version 6.0.0 (PacBio, Menlo Park, CA). K-mer histograms were made with jellyfish version 2.2.6 (Marçais & Kingsford 2011 ...
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bioRxiv - Plant Biology 2024Quote: ... SMRT sequencing libraries were prepared with the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) and sequenced on a PacBio Sequel II system ...
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bioRxiv - Microbiology 2021Quote: DNA modification detection and motif analysis were performed using the PacBio SMRT Link software (PacBio, Menlo Park, CA, USA). Briefly ...
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bioRxiv - Evolutionary Biology 2021Quote: ... using RS Modification and Motif Analysis within the SMRT Analysis System (v2.3, January 2015; PacBio, Menlo Park, CA, USA). The assembled scaffold data were run through QUAST [76] to estimate assembly statistics ...
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bioRxiv - Genomics 2021Quote: ... Long-read DNA libraries were constructed using the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) and sequenced on SMRT cells (1M v3 LR ...
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bioRxiv - Genomics 2021Quote: ... PacBio SMRTbell libraries (∼20kb) were constructed using the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA), following the manufacturer’s protocol ...
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bioRxiv - Evolutionary Biology 2023Quote: ... We prepared a PacBio HiFi library with the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA). The library was sequenced on a PacBio Sequel II instrument on an 8M SMRT cell in CCS mode with a 30-hour movie time ...
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bioRxiv - Evolutionary Biology 2023Quote: ... SMRTbell libraries (∼20kb) for PacBio Sequel were constructed using SMRTbell Template Prep Kit 1.0 (PacBio, Menlo Park, CA, USA) using the manufacturer’s recommended protocol ...
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bioRxiv - Genomics 2024Quote: ... one PacBio Iso-seq library was prepared using the SMRTbell® prep kit (PacBio, Menlo Park, CA, United States) and sequenced on the Sequel IIe.
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bioRxiv - Genomics 2021Quote: A long-read sequence library was prepared using the SMRTbell Express Template Prep Kit 1.0 (PacBio, Menlo Park, CA, USA). The size selection of the library was performed by BluePippin (Sage Science ...
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bioRxiv - Genomics 2022Quote: ... Sequencing libraries were prepared for each species using the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) and following the ultra-low protocol ...
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bioRxiv - Genomics 2021Quote: ... A long insert library for KSR5 was also prepared and sequenced on an RSII instrument (PacBio, Menlo Park, CA, USA). The paired-end sequence reads were used for genomic size estimation based on k-mer frequency (k = 17 ...
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bioRxiv - Plant Biology 2023Quote: ... Libraries were prepared and multiplexed with the PacBio SMRTbell® Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) according to the published protocol (19) ...
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bioRxiv - Molecular Biology 2024Quote: ... a long-read sequence library was prepared using the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) and sequenced using a PacBio Sequel II system (PacBio ...
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bioRxiv - Evolutionary Biology 2024Quote: ... the 20-kb insert size SMRTbell library was constructed and sequenced on the Sequel II platform (PacBio, Menlo Park, CA) at Berry Genomics (Beijing).
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bioRxiv - Genomics 2023Quote: ... Extractions were performed using the Nanobind Tissue Big DNA kit following the manufacturer’s instructions (Pacific BioSciences - PacBio, Menlo Park, CA). For song sparrow ...
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bioRxiv - Plant Biology 2022Quote: ... and a HiFi SMRTbell library was constructed with the SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA). The library DNA was fractionated using a BluePippin (Sage Science ...
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bioRxiv - Evolutionary Biology 2024Quote: ... A PacBio SMRTbell library was prepared using the SMRTbell Template Prep Kit 2.0 and Sequel II Binding 2.2 (PacBio, CA, USA), and loaded onto the sequencer by diffusion ...
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bioRxiv - Plant Biology 2024Quote: ... The PacBio SMRTbell library (15-20kb) was constructed using SMRTbell Express Template Prep Kit 3.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Evolutionary Biology 2020Quote: ... DNA isolation and sequencing was carried out by Dovetail Genomics (Scotts Valley, CA, USA) using PacBio sequencing for de novo assembly with Arrow (genomicconsensus package, PacBio tools) followed by preparation of Chicago and HiC libraries that were sequenced on Illumina platforms ...
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bioRxiv - Genomics 2023Quote: ... The PacBio SMRTbell library (∼20kb) for PacBio Sequel was constructed using SMRTbell Template Prep Kit 1.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Immunology 2023Quote: ... PacBio SMRTbell amplicon libraries for PacBio Sequel were constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Microbiology 2024Quote: The index isolate DA14734 was sequenced with long-read whole genome sequencing using the Pacific Biosciences platform (PacBio, Menlo Park, CA). DNA was prepared from overnight cultures using the Qiagen Genomic-Tip 100 ...
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bioRxiv - Microbiology 2024Quote: ... Samples with many short DNA fragments were further purified using either the Short Read Eliminator kit (PacBio, San Diego, CA, USA), or 0.4 - 0.5 x volume KAPA PURE SPRI beads (Roche ...
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bioRxiv - Genomics 2024Quote: ... Fragments less than 5 kb were selectively removed using the AMPure PB beads size selection kit (Pacbio, Menlo Park, CA, USA). The SMRTbell® prep kit 3.0 from Pacbio was used to prepare the sequencing libraries ...
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bioRxiv - Genomics 2024Quote: ... The PacBio SMRTbell library for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer-recommended protocol ...
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bioRxiv - Evolutionary Biology 2021Quote: ... HiFi library preparation and sequencing were performed at the McGill University and Génome Québec Innovation Center on a Sequel II instrument (PacBio, Menlo Park, CA, USA). Each individual was sequenced on an individual SMRT cell 8M ...
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bioRxiv - Genomics 2021Quote: ... South Korea) on the RSII platform using single molecule real time (SMRT) long read sequencing technology from Pacific Biosciences (PacBio, CA, USA). The sequencing chemistry included the 20Kb SMRTbell template and the polymerase binding kit P6 Version 2 ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared following the protocol “Procedure & Checklist – Preparing HiFi SMRTbell® Libraries from Ultra-Low DNA Input” (PacBio, CA, USA) and subsequently inspected using a FEMTOpulse ...
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bioRxiv - Genomics 2023Quote: ... The DNA was then selected for high molecular weight DNA using the PacBio Short Read Eliminator kit (PacBio, Menlo Park, CA, USA). Concentration was assessed using the dsDNA BR assay on a Qubit fluorometer (Thermo Fisher Scientific ...
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bioRxiv - Genomics 2023Quote: The PacBio SMRTbell library (∼20kb) for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The PacBio SMRTbell library (∼20kb) for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer’s recommended protocol ...
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bioRxiv - Evolutionary Biology 2023Quote: ... The PacBio SMRTbell library (∼20kb) for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Genomics 2024Quote: ... The PacBio SMRTbell library (∼20kb) for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer-recommended protocol ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The PacBio SMRTbell library (∼20kb) for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Genomics 2022Quote: ... The PacBio SMRTbell library (~20kb) for PacBio Sequel was constructed using SMRTbell Express Template Prep Kit 2.0 (PacBio, Menlo Park, CA, USA) using the manufacturer recommended protocol ...
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bioRxiv - Plant Biology 2022Quote: ... 20 kb DNA template was prepared using the PacBio Sequel 2.0 sequencing enzyme and chemistry according to manufacturer’s (PacBio, Menlo Park, CA, USA) instructions ...