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Citations for Zymo Research :
401 - 450 of 484 citations for 7 nitro 3 oxido 6 4 phenylpiperazin 1 yl 2 1 3 benzoxadiazol 3 ium since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2020Quote: Total RNA was isolated from Vero cells after 4 days post infection using the Direct-zol RNA isolation kit (Zymo Research). 1 μg of RNA isolate was subjected to rRNA removal with the NEBNext rRNA Depletion Kit (NEB ...
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bioRxiv - Bioengineering 2022Quote: The isolated yeast populations obtained after round 4 were subjected to colony screen and plasmid recovery by using Zymoprep kit (Zymo Research). The plasmids were transformed into E ...
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bioRxiv - Genomics 2020Quote: ... 4-SUTP containing RNA was eluted in 100 mM DTT buffer and purified with RNA Clean and Purification kit (Zymo Research) with in-column DNAseq reaction to eliminate traces of genomic DNA ...
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bioRxiv - Microbiology 2020Quote: ... Samples were centrifuged 1 min at 12000 g at 4°C and RNAs were extracted from supernatants with Direct-zol RNA Mini Prep kit (Zymo Research), following manufacturer’s protocol and including the optional DNAse treatment step ...
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bioRxiv - Bioengineering 2023Quote: ... The lysates were centrifuged at 5000 x g for 10 min at 4 °C and supernatant added to gDNA extraction columns (Zymo Research). The columns were centrifuged for 4 min at 1500 x g and 1 min at 10000 x g at RT and incubated with 400 µl Genomic lysis buffer (Zymo Research ...
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bioRxiv - Plant Biology 2024Quote: Total RNA was extracted from rosette tissue harvested at ZT 23 on day 25 post imbibition (n = 4 biological replicates) using the Direct-zol-96 MagBead RNA kit (Zymo Research). RNA was checked for degradation using a Tapestation 4150 (Agilent ...
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bioRxiv - Genomics 2022Quote: ... for 2 hours at 37C then cleaned using a Zymo DNA Clean & Concentrator column-5 (Zymo #D4013). The cleaned RCA product was digested using NEBNext dsDNA Fragmentase (NEB #M0348 ...
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bioRxiv - Biochemistry 2020Quote: ... The released RNA was then cleaned up by adding 2 volumes of RNA Lysis Buffer (Zymo Research) and one volume of 100% ethanol ...
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bioRxiv - Microbiology 2022Quote: pAd/SARS-CoV-2-S1Beta was amplified and purified using ZymoPURE II plasmid maxiprep kit (Zymo Research). For Expi293 cell transfection ...
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bioRxiv - Microbiology 2023Quote: ... and 2) amplification of DNA extracted from a ZymoBIOMICS Microbial Community Standard (Zymo Research, Irvine, CA U.S.A.). Contaminating ASVs were identified through the use of the decontam package 84 ...
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bioRxiv - Genomics 2023Quote: ... 2 µl adapter filling mixture containing 0.375 mM 5-Methylcytosine dNTP Mix (Zymo Research, cat. no. D1030), 0.75 µl of Thermopol Reaction buffer (New England Biolabs ...
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bioRxiv - Genomics 2020Quote: DNA was extracted using 4-10 unstained slides of FFPE tissue using the Pinpoint Slide DNA Isolation system (Zymo Research, Orange, CA). In brief ...
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bioRxiv - Plant Biology 2019Quote: Total RNA from 4 weeks old Arabidopsis thaliana WT Col-0 and mta mutant plants was isolated using Direct-zol™ RNA kit (Zymo Research). RNA was quantified by Qubit RNA Assay Kit (Life Technologies ...
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bioRxiv - Immunology 2019Quote: ... Total RNA from approximately 2 × 106 cells were isolated using the Direct-Zol RNA isolation kit (Zymo Research). RNAseq libraries were prepared as previously described 70 using KAPA Standed RNA-seq library preparation kit (KAPA Biosystems) ...
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bioRxiv - Cell Biology 2021Quote: ... Transfections were performed with PEI and 2-5 µg of transfection grade DNA (ZymoPure Plasmid MaxiPrep Kit, Zymo) per dish as described in above ...
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bioRxiv - Systems Biology 2020Quote: ... 2 μL of PCR products from each well were pooled and purified using the DNA Clean & Concentrator (Zymo) and eluted in water ...
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bioRxiv - Plant Biology 2021Quote: ... 500 pg - 2 µg DNA was treated with sodium bisulfite using the EZ DNA Methylation kit (Zymo Research). Amplicons for sequencing were generated by PCR using degenerate primers (see Supplemental Table 1 ...
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bioRxiv - Molecular Biology 2019Quote: ... for 2 hours at 45°C and purified using the ChIP DNA Clean and Concentrator Kit (Zymo Research).
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bioRxiv - Genomics 2021Quote: ... RNA was isolated from 2 day-differentiated TXΔXicB6 cells using the Direct-Zol RNA Miniprep Kit (Zymo Research). To remove any remaining gDNA ...
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bioRxiv - Immunology 2021Quote: Total RNA isolations from SARS-CoV-2 were carried using DIRECT-ZOL RNA Miniprep Kits (Zymo Research, USA), and concentrations were determined using QUBIT fluorometer with the QUBIT RNA HS Assay (Thermo Fisher Scientific ...
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bioRxiv - Immunology 2022Quote: Genomic DNA from 2×106 NCI-H295R cells was isolated with the Quick-DNA Miniprep Kit (Zymo research). Bisulfite treatment was performed using the EZ DNA Methylathion™ Kit (Zymo Research) ...
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bioRxiv - Animal Behavior and Cognition 2023Quote: ... for 2 min at 30Hz and extracted RNA using the Direct-Zol RNA MiniPrep kit (Zymo Research, USA) with on-column DNA digest according to the manufacturer protocol ...
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bioRxiv - Genomics 2023Quote: ... 2 x 500 ng of DNA was bisulfite modified with the EZ DNA Methylation-Lightning kit (\#D5030, Zymo) and standardized to a concentration of 25 ng/uL BC-DNA ...
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bioRxiv - Systems Biology 2023Quote: ... We then sequentially added and centrifuged through the column 400 µL DNA/RNA prep buffer (Zymo, #D7010-2), 600 µL DNA/RNA wash buffer (Zymo ...
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bioRxiv - Systems Biology 2023Quote: ... 2 μL of PCR products from each well were pooled and purified using the DNA Clean & Concentrator (Zymo) and eluted in water ...
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bioRxiv - Synthetic Biology 2022Quote: ... The cells were then harvested by centrifugation at 3500g for 4 min and prepared for transformation using the Frozen-EZ Yeast Transformation II Kit (Zymo Research, Irvine, CA). For plasmid transformations ...
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bioRxiv - Microbiology 2023Quote: ... control samples (n = 4, one for each extraction batch) using commercially available kits optimized for fecal-based microbial communities (Zymo fecal/soil kit), and some aliquots archived ...
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bioRxiv - Immunology 2021Quote: Total RNA isolations were performed from SARS-CoV-2 specimens using DIRECT-ZOL RNA Miniprep Kits (Zymo Research, USA). Quantitative RT-PCR was performed with the QUANTIVIRUS SARS-CoV-2 Test Kit (Diacarta ...
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bioRxiv - Immunology 2021Quote: Total RNA isolations were performed from SARS-CoV-2 specimens using Direct-zol RNA Miniprep Kits (Zymo Research, USA). Quantitative RT-PCR was performed with the QuantiVirus SARS-CoV-2 Test Kit (Diacarta ...
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bioRxiv - Genomics 2021Quote: ... Excess positive SARS-CoV-2 inactivated swab samples (200µl viral transport medium from nose and throat swabs inactivated in 200 µl Zymo DNA/RNA shield and 800 µl Zymo viral DNA/RNA buffer ...
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bioRxiv - Systems Biology 2023Quote: ... We thawed the cell pellets on ice and then resuspended with 400 µL RNA binding buffer (Zymo, #R1013-2). The mixtures were then transferred to 2 mL screw cap tubes with zirconia beads inside ...
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bioRxiv - Genomics 2023Quote: ... the resulting poly-A+ RNA fraction (corresponding to 0.7-2% of the starting amount) was then purified again on a Clean & Concentrator-5 Column Kit (Zymo) and eluted in 10µL of molecular-grade water.
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bioRxiv - Microbiology 2021Quote: ... cells collected by centrifugation (6000 xg, 10 min, 4°C) and DNA extracted using the ZR Fungal/Bacterial DNA Kit (Zymo Research, Irvine, CA, USA), following the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: DNA from 32 skull base chordomas and 4 NP samples were bisulfite converted with EZ-96 DNA Methylation kit (Zymo Research, Orange, CA, USA) and used for genome-wide DNA methylation profiling with Methylation EPIC (Illumina ...
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bioRxiv - Microbiology 2019Quote: ... The filter-associated biofilm was disrupted by adding 1 ml PBS + 0.01% Triton X-100 detergent and agitating the tubes at high speed for 2 minutes using a Genie Disruptor (Zymo). This suspension was diluted ...
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bioRxiv - Molecular Biology 2021Quote: ... This library pool was then size selected on a 2% agarose gel by cutting between 150-800 nucleotides and performing gel purification (Zymo). To determine the loading density of the final pooled library ...
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bioRxiv - Microbiology 2020Quote: The Zymobiomics microbial community DNA standard consisting of 8 bacterial and 2 fungal genomic DNAs (cat. no. D6305) was obtained from Zymo Research (Irvine ...
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bioRxiv - Genomics 2022Quote: Two hundred microliters of lysozyme solution (50 U/μL Ready-lyse lysozyme [Lucigen, WI, USA], 2 U/mL zymolyase [Zymo Research ...
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bioRxiv - Microbiology 2022Quote: ... Filters were then transferred into a 1.5 ml tube and the filter-associated cells were resuspended by adding 1 ml 1X PBS + 0.05% Triton X-100 detergent and agitating the tubes at high speed for 2 minutes using a Genie Disruptor (Zymo). This suspension as well as the inoculum were diluted ...
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bioRxiv - Microbiology 2019Quote: ... To determine if the mock community amplicon library compositions produced by the our 2-Step library preparation and HiSeq sequencing methods were within the same variation observed by Zymo Research ...
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bioRxiv - Neuroscience 2020Quote: RNA was extracted from lumbar DRGs 2-5 following the manufacturer’s protocol with a Direct-zol RNA Miniprep Plus kit (Zymo R2071). RNA libraries were prepared and sequenced by the UTSW Microarray core facility on an Illumina NextSeq SE-75 sequencer at 40 million reads/sample ...
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bioRxiv - Microbiology 2020Quote: ... collect ~5 roots and fully submerge in a pre-labelled 2 mL microcentrifuge tube filled with DNA/RNA Shield (Zymo Research ...
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bioRxiv - Genomics 2021Quote: ... RNA was extracted from inactivated swab samples using the Quick DNA/RNA Viral Magbead kit from step 2 of the DNA/RNA purification protocol (Zymo) (files.zymoresearch.com/protocols/_r2140_r2141_quick-dna-rna_viral_magbead.pdf).
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bioRxiv - Developmental Biology 2023Quote: DNA was extracted from fin clips stored in 100% ethanol for <2 weeks using the PCR biosystems rapid extract lysis kit or Quick-DNATM Miniprep Plus kit by Zymo research ...
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bioRxiv - Microbiology 2023Quote: ... two agar plugs were placed in a 2 mL eppendorf tube with 500 μL of chloroform and agitated on a Genie Disruptor (Zymo) for 2 min ...
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bioRxiv - Microbiology 2023Quote: ... two agar plugs were placed in a 2 mL eppendorf tube with 500 μL of chloroform and agitated on a Genie Disruptor (Zymo) for 2 min ...
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bioRxiv - Genomics 2023Quote: ... at 37 °C for 2 hours and purified using Zymo ssDNA/RNA clean & concentrator kit following manufacturer’s instructions (Zymo D7011). Next ...
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bioRxiv - Molecular Biology 2023Quote: ... PCR products with 150-400 bp were then cut and purified with 2% agarose gel and column (Zymo research, D4008). Finally ...
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bioRxiv - Microbiology 2023Quote: ... tissue was scraped from each fragment (avoiding the apical tip) and added directly to 2 mL tubes containing 0.5ml DNA/RNA shield (Zymo Research) and Lysing Matrix A (MP Biomedicals ...
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bioRxiv - Evolutionary Biology 2021Quote: ... PCR products were resolved on 2% agarose gels followed by extraction and purification of candidate DNA amplicons using Zymoclean Gel DNA Recovery Kits (Zymo Research). Purified PCR products were cloned using the TOPO TA cloning kit (ThermoFisher Scientific) ...