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Citations for Illumina :
1 - 50 of 240 citations for V Bottom Microplate 96 well since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2020Quote: ... using the 96-well plate Nextera indexing primers (Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2020Quote: Equimolar libraries from each 96 well plate were pools and sequenced with NextSeq500 (Illumina) High Output ...
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bioRxiv - Genetics 2021Quote: ... A receptacle 96 well plate was prepared with 9uL 1X TD buffer (Nextera XT Kit, Illumina Inc ...
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bioRxiv - Genomics 2020Quote: ... The harvested single-cell cDNA was barcoded in 96 well plate using Nextera XT Library Prep kit (Illumina). Uniquely barcoded libraries from single-cells pooled together and sequenced using a HiSeq-Hi-output-2500 sequencer (Illumina) ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries from up to twelve 96-well plates were sequenced on one MiSeq run (Illumina, San Diego, CA) with paired-end 300 bp sequencing reads (Illumina ...
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bioRxiv - Genomics 2023Quote: ... and 0.2x (v/v) TB1 (Illumina Inc.). The nuclear pellet was resuspended with an additional 30 μl of loading buffer ...
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bioRxiv - Microbiology 2021Quote: ... with 5% (v/v) 20 pM PhiX (Illumina), using 150 cycle v3 cartridges ...
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bioRxiv - Developmental Biology 2021Quote: ... were combined in a way that each well was uniquely labelled and dual-indexing metadata could be obtained (Nextera XT 96-Index kit; Illumina). PCR amplification was performed in a thermal cycler at these settings ...
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bioRxiv - Immunology 2020Quote: ... cDNA was harvested and diluted to 0.1–0.3 ng/μl and libraries were prepared in 96-well plates using a Nextera XT DNA Sample Preparation kit (Illumina) according to the protocol supplied by Fluidigm ...
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bioRxiv - Genetics 2020Quote: ... equimolar amounts of amplification products from each sample of the 96-well microtiter plate were bulked and applied to c-Bot (Illumina) bridge PCR followed by sequencing on Illumina Hiseq2000 ...
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bioRxiv - Physiology 2023Quote: ... The subsequent steps of library preparation were carried out on the Agilent NGS Bravo workstation in 96-well plates adapted for the TruSeq PCR-free Sample Preparation protocol by Illumina.
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bioRxiv - Neuroscience 2023Quote: ... UV-cleaved oligonucleotides from each spatially resolved ROI were aspirated and collected in a 96-well collection plate to perform library prep with Seq Code primers and sequenced on an NextSeq500 sequencer instrument (Illumina). Digital count conversion files (DCC ...
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bioRxiv - Molecular Biology 2023Quote: Libraries were then prepared for deep sequencing using the Nextera XT DNA Library Prep kit in a 96-well plate format (Illumina). Manufacturer’s instructions were followed for each step ...
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bioRxiv - Molecular Biology 2022Quote: ... 5% v/v TDE1 Tagment DNA Enzyme (Illumina, Cambridge, UK) in nuclease free water (Sigma ...
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bioRxiv - Genomics 2021Quote: ... Sequencing libraries were constructed using Nextera® XT DNA Library Preparation Kits and 96 well v2 indexes (Illumina, San Diego, CA, USA). The libraries were quality checked using an Agilent 4200 TapeStation and pooled at equimolar concentrations ...
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bioRxiv - Physiology 2024Quote: ... supplemented with 5% v/v TDE1 Tagment DNA Enzyme (Illumina, Cambridge, UK) in nuclease free water (Sigma ...
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bioRxiv - Evolutionary Biology 2020Quote: ... with 96 indexes (Illumina, #20018708) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2020Quote: ... Data were processed using the Genotyping module (v.1.9.4) in GenomeStudio v.2011.1 (Illumina) to calculate B-allele frequencies (BAF ...
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bioRxiv - Neuroscience 2019Quote: Samples were genotyped using the customized NeuroChip Array v.1.0 or v.1.1 (Illumina) 8 ...
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bioRxiv - Cell Biology 2020Quote: ... and D (v.2, Illumina) and sequenced on HiSeq4000 and NovaSeq6000 (Illumina ...
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bioRxiv - Neuroscience 2022Quote: ... with a 20% v/v PhiX Control v3 spike-in (Illumina, Cat. No. FC-110-3001) and sequenced on Illumina’s NovaSeq 6000 ...
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bioRxiv - Immunology 2023Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme (Nextera DNA Sample Prep Kit (Illumina)) ...
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bioRxiv - Synthetic Biology 2024Quote: ... The pooled libraries were spiked with 1% v/v PhiX Control V3 (Illumina, San Diego, CA) and were diluted to a final loading concentration of 10 pM and 100 pM for the MiSeq and iSeq ...
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bioRxiv - Microbiology 2020Quote: ... The final libraries were multiplexed and 20% (v/v) PhiX control DNA (Illumina, Catalog # FC-110-3001) per lane and were sequenced using an Illumina HiSeq 2500 Rapid Run (150 bp ...
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bioRxiv - Genomics 2021Quote: ... 0.05 μL 10% v/v Tween and 2.5 μL TDE1 enzyme (Illumina, San Diego CA, Catalog #20034198). Tagmented DNA was purified with Zymo DNA clean & concentrator-5 kit (Zymo Research #D4013) ...
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bioRxiv - Cancer Biology 2023Quote: ... A NovaSeq S1 v 1.5 or SP v 1.5 Reagent Kit (100 cycles) (Illumina, 20028319 and 20028401) was used ...
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bioRxiv - Cell Biology 2021Quote: ... and TruSeq DNA UDI 96 indexes (Illumina). RNA-sequencing was performed using Nocaseq6000 flowcell S2 PE50.
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bioRxiv - Genomics 2019Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme from the Nextera DNA Sample Prep Kit (Illumina) and incubated at 37°C for 10 min followed by 2x washing in RIPA-LS and TE (10mM Tris-HCL ...
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bioRxiv - Genomics 2023Quote: ... and Flye v.2.7.1 assemblers from Illumina short-reads ...
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bioRxiv - Animal Behavior and Cognition 2024Quote: ... Ligation with Ribo-Zero Plus kit and the IDT ILMN RNA UDI B Lig 96 Idx 96 Spl index kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2021Quote: ... 10%(v/v) N,N-dimethyl formamide) and 1 μl of Tagment DNA Enzyme from Nextera Sample Preparation Kit (Illumina) were added to the DNA-beads complex and incubated for 70 sec at 37 °C ...
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bioRxiv - Molecular Biology 2019Quote: ... 0.1% (v/v) Igepal CA-630) for nuclei preparation and treated with Nextera Tn5 Transposase (Nextera DNA Library Preparation Kit, Illumina) at 37°C for 30 min ...
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bioRxiv - Genomics 2023Quote: ... The PhiX Control library was spiked in the sequencing sample at 10% (v/v) (Illumina, cat. no. FC-110-3001).
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bioRxiv - Physiology 2024Quote: ... Pellets (nuclei fractions) were resuspended in transposition buffer (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, 336 Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Systems Biology 2023Quote: ... the final library was diluted to 20 nM with HT1 buffer and PhiX control v3 (20%, v/v) and 600 µL was loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina). The resulting sequences were uploaded to Illumina Sequence Hub and downloaded using BaseSpace Sequence Hub Downloader (Illumina).
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bioRxiv - Genomics 2022Quote: ... Reads were trimmed with Trimmomatic (v 0.39, ILLUMINA-CLIP to remove adaptors ...
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bioRxiv - Systems Biology 2020Quote: ... Final loading concentration of 1.8 pM and 1% PhiX (v/v) was used with the NextSeq® 500/550 High Output Kit v2 (150 cycles) (Illumina). Samples were sequenced paired-end with 75 cycles and single index of 6 cycles.
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bioRxiv - Immunology 2020Quote: ... Final loading concentration of 1.7 pM and 1% (v/v) PhiX was used with the NextSeq® 500/550 High Output Kit v2 (150 cycles) (Illumina Samples were sequenced paired-end with 75 cycles of each read and single index of 6 cycles.
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bioRxiv - Molecular Biology 2022Quote: ... The supernatant was discarded and the pellet (cell nuclei) was resuspended in 50 uL transposition mix (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Animal Behavior and Cognition 2019Quote: ... Fastq files were demultiplexed with bcl2fastq v 2.17.1.14 (Illumina).
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bioRxiv - Microbiology 2022Quote: ... and subsequently assembled using either SPAdes v 3.13.1 (Illumina) or Unicycler v 0.4.9 (ONT MinION) ...
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bioRxiv - Evolutionary Biology 2019Quote: ... and reads were demultiplexed using bcl2fastq v.2.19 (Illumina). For each sample ...
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bioRxiv - Microbiology 2020Quote: The libraries were demultiplexed with CASAVA v.1.8 (Illumina) and deposited at Genbank’s Sequence Read Archive under the numbers SAMN5464651 through SAMN5464666 (Supplementary Table 2) ...
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bioRxiv - Cancer Biology 2022Quote: ... RNA-Seq libraries were generated from 300 ng of total RNA using TruSeq Stranded mRNA Library Prep Kit and IDT for Illumina - TruSeq RNA UD Indexes (96 Indexes, 96 Samples) (Illumina, San Diego, USA), according to manufacturer’s instructions ...
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bioRxiv - Microbiology 2023Quote: ... The diluted library was combined with the subsequent PhiX control v3 (20%, v/v) and loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina, Carlsbad, CA, USA). The resulting sequences were uploaded to BaseSpace (Illumina ...
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bioRxiv - Genomics 2022Quote: Length of assembled heavy fibroin (HFib) gene with two approaches (HiFi, top; Illumina, bottom) for P ...
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bioRxiv - Genomics 2021Quote: ... Screenshots from Gap5 with reads sorted by technology (Illumina on top; nanopore on bottom), showing two instances where errors in the consensus can be resolved by correcting to the consensus of the Illumina reads ...
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bioRxiv - Physiology 2021Quote: ... and Nextera XT 96-Index kit (Illumina, FC-131-1002). Pooled libraries were run on the Illumina HiSeq 4000 at the Cancer Research UK Cambridge Institute Genomics Core ...
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bioRxiv - Neuroscience 2023Quote: ... Raw sequencing data was demultiplexed with bcl2fastq2 v.2.20 (Illumina) followed by Tn5 transposon adapter sequences trimming with Cutadapt106 ...
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bioRxiv - Cancer Biology 2023Quote: ... we dispensed 600 nL of tagmentation reaction mix containing Tagmentation DNA buffer (TD) and Amplicon Tagment Mix (ATM) at 2:1 v/v ratio (Nextera kit, Illumina, cat. no. FC-131-1096) into each well and performed tagmentation at 55° C for 5 min followed by hold at 4° C in a PCR thermocycler ...