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Citations for Illumina :
151 - 200 of 292 citations for SARS Coronavirus Spike Glycoprotein S1 Mosaic N Term E. coli since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2023Quote: ... The resulting cDNA library was sequenced on an Illumina NovaSeq 6000 using the S1 100 cycle Reagent Kit v1.5 (Illumina 200228319), with a targeted read depth of 20,000 reads/cell.
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bioRxiv - Physiology 2023Quote: ... The pooled libraries were diluted to 380 pM prior to onboard clonal clustering of the patterned flow cell using the NovaSeq 6000 S1 Reagent Kit v1.5 (200 cycle) (Illumina 20028318). A 2×101 cycle sequencing profile with dual index reads is completed using the following sequence profile ...
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bioRxiv - Cancer Biology 2023Quote: ... Final DNA libraries sequencing was performed in Illumina NovaSeq 6000 platform using the NovaSeq 6000 S1 Reagent Kit 300 cycles (2 x 150 paired-end reads) (Illumina). Sequencing data were analysed with Illumina DRAGEN Bio-IT Platform v4.0 using proprietary pipelines for variant calling ...
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bioRxiv - Immunology 2023Quote: Sequencing was performed in a paired-end mode with S1 and S4 flow cells (2 × 150 cycles) on a NovaSeq 6000 sequencer (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... Sequencing was performed in paired-end mode with an S1 flow cell (28/8/87 cycles) and a NovaSeq 6000 sequencer (Illumina) at the MGX core facility of Montpellier ...
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bioRxiv - Physiology 2023Quote: ... followed by onboard clonal clustering of the patterned flow cell using the NovaSeq 6000 S1 Reagent Kit v1.5 (200 cycle) (Illumina 20028318). A 2x101 cycle sequencing profile with dual index reads is completed using the following sequence profile ...
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bioRxiv - Molecular Biology 2023Quote: Sequencing of Ribo-seq and RNA-seq libraries were performed in multiplex separately using S1 Flowcell for the NovaSeq 6000 sequencer (Illumina). Demultiplexing was performed using bcl2fastq software (Illumina).
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bioRxiv - Neuroscience 2023Quote: ... after which onboard clonal clustering of the patterned flow cell was performed using a NovaSeq 6000 S1 Reagent Kit v1.5 (200 cycle) (Illumina 20028318). A 2x101 cycle sequencing profile with dual index reads was completed using the following sequence profile ...
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bioRxiv - Cancer Biology 2023Quote: ... The 100-cycle paired end sequencing run was performed using a NovaSeq 6000 S1 Reagent Kit v1.5 200 cycle (Illumina 20028318). Sequence data was converted to fastq files ...
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bioRxiv - Cell Biology 2023Quote: ... Cells were processed according to Chromium 3’ Gene Expression V3 Kit (10X Genomics) using the manufacturer’s guidelines followed by sequencing on an S1 Novaseq chip (Illumina Inc.) at the Genomics Core of Icahn School of Medicine at Mount Sinai.
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bioRxiv - Evolutionary Biology 2024Quote: ... Samples were pooled equimolarly and sequenced using 150 bp paired end reads on a NovaSeq S1 flowcell (Illumina, California, USA) at the Biomolecular Resource Facility within the John Curtin School of Medical Research ...
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bioRxiv - Developmental Biology 2023Quote: ... and then 50 nucleotide paired-end DNA sequencing was completed on an Illumina NovaSeq 6000 system using a S1 flow cell (Illumina). Raw RNAseq reads are available at the SRA under accession (Not uploaded yet).
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bioRxiv - Genomics 2024Quote: ... WTA libraries and LMO libraries were pooled and sequenced on an Illumina NovaSeq 6000 using a NovaSeq S1 2x100 cycles kit (Illumina, as follows ...
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bioRxiv - Immunology 2024Quote: ... The sequencing was performed on an Illumina NovaSeq using S1 and S2 100 cycle kits (Illumina, San Diego, CA, USA) with specific dimensions (67 × 8 × 50 bp).
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bioRxiv - Physiology 2020Quote: Sequencing of the library was performed at a final concentration of 1.8 pM and with a 1 % PhiX v3 control library spike-in (Illumina) on the NextSeq500 sequencing system (Illumina) ...
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bioRxiv - Microbiology 2021Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument at the Boston University microarray and sequencing core according to Illumina and 10x Genomics guidelines with 1.4-1.8pM input and 1% PhiX control library spike-in (Illumina, USA).
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bioRxiv - Pathology 2023Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument according to Illumina and 10X Genomics guidelines with 1.4–1.8 pM input and 1% PhiX control library spike-in (Illumina, USA). Sequencing data were processed using 10X Genomics’ Cell Ranger pipeline to generate feature/barcode matrices from raw count data.
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bioRxiv - Genomics 2023Quote: ... the proportion of the scifi-ATAC-seq library in a lane should be less than 50% or extra spike-in library (e.g., PhiX control from Illumina) should be added to the lane.
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bioRxiv - Cancer Biology 2023Quote: ... and sequencing was carried out with a NovaSeq 6000 SP 2×100bp FlowCell plus PhiX spike-in (Illumina, US), outputting ∼25M read pairs/sample ...
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Resolution of SARS-CoV-2 infection in human lung tissues is driven by extravascular CD163+ monocytesbioRxiv - Immunology 2024Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument at the Boston University microarray and sequencing core according to Illumina and 10x Genomics guidelines with 1.4-1.8pM input and 1% PhiX control library spike-in (Illumina, USA).
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The spatial landscape of glial pathology and T-cell response in Parkinson’s disease substantia nigrabioRxiv - Neuroscience 2024Quote: ... The libraries were pooled with 10% PhiX spike-in and sequenced with NextSeq High Output 300 Cycles kits (Illumina) on an Illumina NextSeq 550 (read 1 ...
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bioRxiv - Plant Biology 2020Quote: ... sequencing was performed with the Illumina NovaSeq 6000 system using S1 flow cell with lane divider (Illumina, San Diego, CA, USA). Read length for the paired-end run was 2 x 101 bp ...
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bioRxiv - Microbiology 2020Quote: ... Contig/s were manually checked for redundant dhfr genes and for additional resistance genes of interest (S1 Data for Illumina data).
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bioRxiv - Immunology 2023Quote: ... single-cell RNA-seq libraries were pooled and sequenced on a NovaSeq 6000 instrument using an S1 flow cell (Illumina 20028319).
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bioRxiv - Cancer Biology 2023Quote: ... The libraries were prepared according to the manufacturer’s protocols and sequenced using the NovaSeq 6000 Paired-End S1 kit (Illumina, California, USA) by the NGS Core Facility of the German Cancer Research Center (DKFZ).
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bioRxiv - Genomics 2023Quote: ... Libraries were pooled and sequenced (2x150nt) on one lane of a S1 flowcell on the NovaSeq 6000 (Illumina, San Diego, CA). FastQ files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina).
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bioRxiv - Microbiology 2024Quote: ... RNA sequencing was performed on an Illumina NovaSeq S1 PE100bp to obtain 1.6 billion reads (Illumina Inc, San Diego, California, USA). Samples were demultiplex and barcodes removed by the core facilities prior to releasing sequences.
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bioRxiv - Microbiology 2022Quote: ... The quality of paired-end reads obtained from MiSeq sequencing was analyzed by using Qiagen CLC Genomics Workbench 22.0.1 and the Identify ARTIC V3 SARS-CoV-2 Low Frequency and Shared Variants (Illumina) workflow was used in genetic variant analyses ...
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bioRxiv - Neuroscience 2021Quote: ... We used TruSeq Stranded mRNA kits (Illumina P/N 20020594) to prepare the stranded mRNA libraries ...
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bioRxiv - Microbiology 2021Quote: ... Final sequencing pools were loaded at 12pM concentration onto an Illumina MiSeq 300 cycle sequencing run with a 1% PhiX spike-in (Illumina).
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bioRxiv - Cell Biology 2021Quote: ... and a 4 nM library was prepared for sequencing with a 50% spike in of PhiX Control DNA and the MiSeq Reagent Kit v2 (all from Illumina). Libraries were sequenced in 250 bp paired-end mode on an Illumina MiSeq Benchtop Sequencer ...
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bioRxiv - Microbiology 2021Quote: ... a PhiX spike-in of 2.5-5% was added to the pools (PhiX Sequencing Control v3; Illumina # FC-110-3001). Samples were run on the Illumina NextSeq 500 ...
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bioRxiv - Neuroscience 2021Quote: ... An equimolar pool of each librarie was prepared and loaded at 10 pM (with 25% PhiX spike in for generating sequencing diversity) for a 150 cycle paired-end run on a MiSeq instrument (Illumina) using a v2 reagent kit ...
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bioRxiv - Microbiology 2022Quote: ... The viral spike sequences were verified using unbiased NGS sequencing (KAPA HyperPrep library kit with RiboErase, followed by Illumina sequencing). All cells and virus stocks tested negative for mycoplasma using MycoAlert Plus reagents (Lonza) ...
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bioRxiv - Microbiology 2022Quote: ... a PhiX spike-in of 2.5–5% was added to the pools (PhiX sequencing control v3; Illumina FC-110-3001). Samples were run on the Illumina NovaSeq 6000 platform (single-read 1 ×85 cycles and 6 × i7 index cycles).
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bioRxiv - Genomics 2020Quote: ... and pooled in equal concentrations prior to MiSeq v3 sequencing with 15% phiX control spike-in (Illumina FC-110-3001).
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bioRxiv - Molecular Biology 2021Quote: ... SmRNA libraries were prepared as described above using 800 ng of RNA containing 40 ng Drosophila melanogaster RNA as spike-in and sequenced with the Novaseq 6000 system (Illumina) to 40 – 90 million reads per sample.
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bioRxiv - Genetics 2021Quote: ... The bone and reference captured library pools were diluted to 1 pM with a 5% spike-in of PhiX Control V3 (Illumina) for sequencing on a NextSeq 550 (Illumina ...
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bioRxiv - Neuroscience 2021Quote: ... Pooled sequencing libraries were loaded at a concentration of 1.8pM with 10% PhiX spike-in and sequenced using eight Illumina NextSeq 150 Cycle Hi-Output v2.5 kits (Illumina #20024907) on an Illumina NextSeq 550 System ...
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bioRxiv - Developmental Biology 2021Quote: ... The resulting 10 nM pool was denatured to 10 pmol with 5% PhiX spike-in and sequenced as single-read on HiSeq 2500 (Illumina) in rapid mode for 51 cycles (plus 7 cycles index read ...
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bioRxiv - Genomics 2019Quote: ... single-end mode) at 12 pM loading concentration with 10% PhiX spike-in (PhiX Control V3 [Illumina FC-110-3001]) following the manufacturer’s instructions.
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bioRxiv - Genomics 2019Quote: ... single-end mode) at 1.8 pM loading concentration with 2.5% PhiX spike-in (PhiX Control V3 [Illumina FC-110-3001]) following the manufacturer’s instructions.
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bioRxiv - Neuroscience 2022Quote: ... Libraries were pooled from different samples based on molar concentrations and sequenced with 1% PhiX spike-in on a NextSeq 500 instrument (Illumina) with 33 bases each for read 1 and read 2 ...
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bioRxiv - Genomics 2022Quote: ... Illumina) following the Illumina recommended denaturation and loading recommendations which included a 1% PhiX spike in (PhiX Control v3 Illumina). Data was uploaded to Basespace (www.basespace.illumina.com ...
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bioRxiv - Bioengineering 2023Quote: ... Library was sequenced on an Illumina MiSeq instrument using Illumina MiSeq Reagent Kit v2 Micro (300-cycles) with 50% PhiX spike-in (Illumina). After demultiplexing ...
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bioRxiv - Microbiology 2023Quote: ... a PhiX spike-in of 2.5–5% was added to the pools (PhiX sequencing control v3; Illumina FC-110- 3001). Samples were run on the Illumina NovaSeq 6000 platform (single-read 1 ×85 cycles and 6 × i7 index cycles).
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bioRxiv - Immunology 2023Quote: ... all indexed libraries were pooled with 6% PhiX spike-in DNA and sequenced using a MiSeq Reagent Nano Kit v2 (500 cycles) (Illumina) at the Fralin Genomics Sequencing Center.
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bioRxiv - Genetics 2023Quote: ... Samples were pooled prior to sequencing with a 25% spike-in of PhiX and run on a NovaSeq 6000 S4 flow cell from Illumina to generate 150 bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... All sequencing runs were performed with a spike-in of 1% PhiX control library V3 (Illumina, Cat. FC-110-3001). The sequencing mean library size was 134,629,540.5 reads [range ...
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bioRxiv - Molecular Biology 2024Quote: ... and clustered on an Illumina Novaseq 6000 S4 flow cell followed by 150bp paired-end sequencing with inclusion of 10-15% spike-in PhiX Control v3 library (Illumina). Controlled access to DNase-seq ...