Labshake search
Citations for Illumina :
401 - 450 of 1006 citations for Recombinant Human Chemokine C X C Motif Ligand 10 since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... The libraries were sequenced in 0.6 lanes to obtain PE150 reads on a HiSeq X (Illumina). Quality control of the obtained fastq files for individual libraries was performed with FASTQC v0.11.5 (https://www.bioinformatics.babraham.ac.uk/projects/fastqc/).
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bioRxiv - Cell Biology 2024Quote: ... The paired-end WGS (2 x 150 bp) was performed on a NovaSeq 6000 system (Illumina). The bioinformatics analysis of the WGS-based mutation identification was performed according to the MiModD pipeline v0.1.965 by Center for Computational and Systems Biology and Technology Commons at College of Life Science ...
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bioRxiv - Neuroscience 2023Quote: ... and nuclei were resuspended in 200μl transposition mix (1x TD buffer containing X µl of Illumina Tagment DNA TDE1 Enzyme per every X nuclei) ...
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bioRxiv - Genetics 2024Quote: ... We performed multiplex sequencing using an Illumina HiSeq X-Ten sequencer (Illumina, San Diego, CA, USA). Variant calling and annotation were done in-house using the Peking Union Medical College Hospital Pipeline (PUMP ...
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bioRxiv - Developmental Biology 2023Quote: ... P2 100 cycles (Read1-28; Read2-90; Index1-10; Index2-10) (Illumina, cat no. 20046811). Cell Ranger version 6 and version 7.1 (for batch 1 and batch 2 respectively ...
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bioRxiv - Molecular Biology 2020Quote: ... using Illumina whole-genome expression array Human HT-12 V4 (Illumina, Saffron Walden, U.K.). Normalization of the quantified signals (background corrected ...
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bioRxiv - Developmental Biology 2019Quote: The (Illumina, San Diego, CA gene expression arrays (Illumina Human HT-12 Expression BeadChip) and Infinium 450K CpG methylation raw array data analyzed in these studies were published previously and available at Gene Expression Omnibus under accession numbers GSE65211 and GSE65214 ...
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bioRxiv - Cancer Biology 2021Quote: ... Each library was sequenced to 2x human genome coverage on Novaseq sequencer (Illumina, CA).
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bioRxiv - Cell Biology 2020Quote: ... then rRNA-depleted using Ribo-Zero rRNA Removal kit for human samples (Illumina MRZH11124) before proceeding with library preparation (TruSeq mRNA Stranded Library preparation kit ...
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bioRxiv - Cell Biology 2022Quote: ... Ribosomal RNA was removed by Illumina Ribo-Zero Gold rRNA Removal Kit Human/Mouse/Rat (Illumina, San Diego, CA, USA) and stranded total RNA-seq libraries were prepared using the Illumina TruSeq RNA Sample Preparation v2 Kit (Illumina ...
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bioRxiv - Microbiology 2021Quote: ... All RNA samples were treated with RiboZero (Human/Mouse/Rat) (Illumina, San Diego, CA) for the depletion of ribosomal RNA ...
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bioRxiv - Genetics 2020Quote: RNA-seq libraries (TruSeq® Stranded Total RNA Library Prep Human/Mouse/Rat, Illumina) were prepared from 150 ng of previously isolated viral RNA according to the manufacturers’ protocol ...
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bioRxiv - Systems Biology 2019Quote: RNA-Seq of human individual tissues and mixture of 16 tissues (Illumina Body Map),
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bioRxiv - Cancer Biology 2022Quote: ... The reference genome sequences for human (hg38) and mouse (mm10) were downloaded from Illumina iGenomes (www.support.illumina.com/sequencing/sequencing_software/igenome.html) ...
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bioRxiv - Genetics 2022Quote: ... in adolescents and Illumina Human-6 Expression Bead Chips (Illumina, Inc. San Diego, CA) in adults ...
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bioRxiv - Molecular Biology 2023Quote: ... rRNA-depleted by a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina), and reverse transcribed by ProtoScript II Reverse Transcriptase (New England Biolabs) ...
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bioRxiv - Immunology 2024Quote: ... The Ribo-Zero Gold (Human/Mouse/Rat) and (Yeast) kit (Illumina, San Diego, CA) were used to deplete rRNA using 300 ng total RNA as input ...
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bioRxiv - Developmental Biology 2021Quote: ... Paired-end 2 x 75 bp NSQ 500/550 Hi Output KT v2.5 −75 CYS (Illumina, 20024906) was performed for RNA-seq libraries on an Illumina Nextseq 500 instrument ...
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bioRxiv - Genomics 2021Quote: ... The pooled libraries were sequenced in an Illumina HiSeq4000 instrument (2 x 150 bp PE reads) (Illumina). A PhiX control library was applied to the sequencing run as a base balanced sequence for the calibration of the instrument so that each base type is captured during the entire run ...
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bioRxiv - Genomics 2020Quote: ... An H37Rv position with an EBR score of x% indicates that the base calls made from Illumina sequencing and mapping to H37Rv agreed with the base calls made from the PacBio de novo assemblies (Supplementary Note 2 ...
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bioRxiv - Genomics 2020Quote: ... The libraries were sequenced on Illumina HiSeq X ten and NovaSeq 6000 platforms (Illumina, Inc., United States) to generate 150 bp paired-end reads ...
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bioRxiv - Pharmacology and Toxicology 2020Quote: The sequencing reads were obtained after demultiplexing the raw sequencing data using bcl2fastq v2.19.1.403 (Version v2.15.0 for NextSeq™ 500 and HiSeq® X Systems, Illumina), after having validated the quality controls of each sample using the FastQC v0.11.5 software (https://www.bioinformatics.babraham.ac.uk/projects/fastqc/) ...
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bioRxiv - Evolutionary Biology 2021Quote: Given the fact that two sequencing batches from different Illumina platforms (Illumina HiSeq 2000 and HiSeq X) were used to cover the SwAsp collection ...
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bioRxiv - Plant Biology 2021Quote: ... Using 2 x 150 bp paired-end reads generated with the Nextera Truseq libraries (Illumina, CA, USA).
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bioRxiv - Cancer Biology 2022Quote: ... Then these libraries were sequenced on the Illumina sequencing platform (HiSeqTM 2500 or Illumina HiSeq X Ten) and 125 bp/150 bp paired-end reads were generated.
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bioRxiv - Genomics 2022Quote: ... Approximately 200 million of 150 bases pair-end reads were generated using the HiSeq X System (Illumina). Raw Illumina reads were filtered by discarding read pairs if (1 ...
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bioRxiv - Microbiology 2022Quote: ... An H37Rv position with an EBR score of x% indicates that the base calls made from Illumina sequencing and mapping to H37Rv agreed with the base calls made from the PacBio de novo assemblies in x% of the Illumina-PacBio pairs ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequencing (250 x 2) was performed on the Illumina MiSeq (Illumina Inc., San Diego, CA). PCR amplification and sequencing were performed by the Cincinnati Children’s Hospital and Medical Center DNA Core.
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Listeria monocytogenes gene essentiality under laboratory conditions and during macrophage infectionbioRxiv - Microbiology 2022Quote: ... Sequencing was performed in a 2 x 150 bp paired end run on a NextSeq550 instrument (Illumina) using v2.5 midout chemistry.
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bioRxiv - Microbiology 2019Quote: ... We performed paired end sequencing (2 x 300 bp) using the MiSeq reagent Kit V3 (Illumina Inc.) on the MiSeq system (Illumina Inc. ...
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bioRxiv - Microbiology 2021Quote: ... The samples were sequenced (2 x 150 bp) on the iSeq platform (Illumina, San Diego, CA, USA) at the Central and Northern Arava R&D Center (Israel).
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bioRxiv - Genomics 2021Quote: ... An H37Rv position with an EBR score of x% indicates that the base calls made from Illumina sequencing and mapping to H37Rv agreed with the base calls made from the PacBio de novo assemblies in x% of the Illumina-PacBio pairs ...
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bioRxiv - Genetics 2021Quote: ... the DNA sequencing reads (pre-mapped to the X chromosome by Illumina’s ISIS Analysis Software v.2.5.26.1352) were realigned to the GRCh38 X chromosome reference sequence using BWA-MEM in SpeedSeq v0.1.253 ...
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bioRxiv - Immunology 2020Quote: ... Libraries were pooled and sequenced paired-ended for 2 x 75 cycles on a Nextseq500 sequencer (Illumina) to generate 30–40 million fragments per sample ...
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bioRxiv - Immunology 2020Quote: ... Then these libraries were sequenced on the Illumina sequencing platform (HiSeqTM 2500 or Illumina HiSeq X Ten) and 125bp/150bp paired-end reads were generated ...
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bioRxiv - Genomics 2021Quote: ... Libraries were sequenced on the HiSeq4000 with paired end sequencing using 2 x 150 bp reads (Illumina).
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bioRxiv - Cancer Biology 2022Quote: ... Paired end sequencing (2 x 100 bp) of these libraries were performed in the HiSeq 2500 (Illumina). Quality control analysis of the raw data using the NGS QC ToolKit was done ...
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bioRxiv - Genomics 2022Quote: ... Stored nuclei were thawed on ice and the pellet was resuspended in a transposase reaction mixture (25µl 2 x TD buffer, 2.5µl transposase (Illumina) and 22.5µl nuclease-free water) ...
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bioRxiv - Microbiology 2022Quote: ... Libraries were pooled at 3 nM and sequenced on a HiSeq X instrument (Illumina, San Diego, CA) to generate 150 bp paired-end reads (Psomagen ...
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bioRxiv - Molecular Biology 2023Quote: ... Paired-end (2 x 150 bp) reads were collected using the NovaSeq 6000 S4 XP system (Illumina).
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bioRxiv - Plant Biology 2022Quote: ... Libraries were subjected to 150-bp paired end sequencing on the HiSeq X platform (Illumina Inc., USA). Raw sequence data were cleaned using Trimmomatic (version 0.39 ...
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bioRxiv - Genomics 2022Quote: ... WGS of tumor-normal pairs was performed on the HiSeq X-Ten platform (Illumina, San Diego, USA), yielding paired-end reads of 2×150 bp length ...
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bioRxiv - Plant Biology 2022Quote: ... The library was sequenced by paired-end mode using the Illumina Hiseq X platform (Illumina, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced using 2 x 300 bp paired end v3 reagent kit (Illumina, following manufacturer’s protocols). Short read paired-end data were filtered ...
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bioRxiv - Genomics 2023Quote: ... Three runs of paired-end (2 x 150 bp) sequencing were performed on an Illumina MiSeq (Illumina) to generate 25 Gbp of raw data ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were then sequenced for 2 x 150 paired-end reads on either a NovaSeq 6000 (Illumina) with the WUSTL Genome Technology Access Center or Nextseq 550 (Illumina ...
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bioRxiv - Cell Biology 2024Quote: ... The paired-end RNA sequencing (2 x 150 bp) was performed on a HiSeq 4000 system (Illumina). The sequencing data were converted from base call files to FASTQ files using Illumina’s bcl2fastq v2.2.0 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... using the MiSeq Reagent Kit v3 supporting 600-cycles of 2 x 300 paired-end reads (Illumina). The resulting sequence reads were filtered following a cut-off of Phred quality scores ≥30 and read length ≥75 bases ...
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bioRxiv - Plant Biology 2024Quote: ... The libraries were sequenced in paired-end mode using an Illumina HiSeq X instrument (Illumina, CA, USA). The raw reads have been deposited in the DNA Databank of Japan (BioProject accession No ...
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bioRxiv - Molecular Biology 2021Quote: ... 10% PhiX Sequencing Control V3 (Illumina) was added to the pooled amplicon library prior to running the sample on a Miseq Sequencer System (Illumina ...