Labshake search
Citations for Illumina :
151 - 187 of 187 citations for Polybrominated Diphenyl Ether Surrogate Spiking Stock 10X Solution 13C12 99% since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Neuroscience 2024Quote: ... Sequencing of the 10x Genomics single-cell RNA-seq libraries was performed on an Illumina NovaSeq 6000 (Illumina, San Diego, CA) at the sequencing core facility of the Max Planck Institute for Molecular Genetics (Berlin ...
-
bioRxiv - Neuroscience 2024Quote: ... Sequencing of the 10x Genomics single-cell ATAC-seq libraries was performed on an Illumina NovaSeq 6000 (Illumina, San Diego, CA) at by the sequencing core facility at the Max Planck Institute for Molecular Genetics (Berlin ...
-
bioRxiv - Cancer Biology 2024Quote: ... Then the scRNA-seq libraries were constructed by using the Chromium Next GEM Single Cell 3’ Reagent Kits v3 (10X Genomics, USA) and sequenced by using the sequencer Novaseq6000 (Illumina, USA). All procedures were following the manufacturer’s protocol.
-
bioRxiv - Cell Biology 2020Quote: ... Single cell RNA-seq libraries were prepared according to the manufacturer’s instructions (10X Genomics, Pleasanton, CA) and sequenced on the Illumina HiSeq 4000 platform (Illumina, San Diego, CA). The sequencing data were processed with the Cellranger and Seurat (v3 [13] ...
-
bioRxiv - Developmental Biology 2020Quote: Eight samples of 10x Genomics Chromium scRNA-seq data were sequenced on five Illumina HiSeq 2500 flowcells (Illumina, San Diego, CA, USA). Data was processed with bcl2fastq (2.20 ...
-
bioRxiv - Genomics 2019Quote: ... the nuclei pellets were resuspended in transposase Master Mix (1.25 μl 10x TD buffer, 5 μl H2O and 6.5 μl of Tn5: Illumina Nextera Kit; FC-121-1031) and incubated for 30 minutes at 37°C ...
-
bioRxiv - Systems Biology 2021Quote: Single nuclear 3’ RNA-sequencing was performed at the Indiana University Center for Medical Genomics Core using the Chromium single cell system version 3 (10x Genomics, San Francisco, CA) and the NovaSeq6000 sequencer (Illumina, San Diego, CA). Cell Ranger 4.0 was utilized to generate sample-specific FASTQ files and reads were aligned to the mm10 reference genome using STAR ...
-
bioRxiv - Genomics 2021Quote: Linked short-read data were generated by sequencing of 10X Genomics (Pleasanton, CA, USA) Chromium libraries at Corteva Agriscience on the HiSeq 2500 platform (Illumina, San Diego, California). The Tx2783 Chromium dataset had 76× coverage and mean molecule length of 62,942bp ...
-
bioRxiv - Immunology 2023Quote: ... scRNA-seq was completed at Stanford Functional Genomics Facility (SFGF) using the Chromium Single Cell Gene Expression kit (10X Genomics, CA, USA) and Illumina Novaseq (Illumina Inc, CA, USA) sequencer according to manufacturer’s protocols.
-
bioRxiv - Immunology 2021Quote: ... The V(D)J enriched library was then constructed via Chromium Single Cell 5’ Library Construction Kit (10x Genomics Cat#1000020) and libraries were sequenced in a NovaSeq™ 6000 Sequencing System (Illumina, San Diego, CA). V(D)J sequences were collapsed using Cell Ranger ...
-
bioRxiv - Genomics 2022Quote: ... Genomic DNA library was prepared using the Chromium Genome Library Kit v2 (10X Genomics, Pleasanton, CA, USA) and sequenced on the NovaSeq 6000 platform (Illumina, San Diego, CA, USA) to generate paired-end 150 bp reads ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... the HMW DNA was prepared for sequencing using a Chromium Genome Linked Reads Kit (10X Genomics Inc., Pleasanton, CA) and sequenced on a HiSeq 2500 DNA Sequencing Platform (Illumina Inc., San Diego, CA). The linked-read output data were assembled using the Supernova assembler (Weisenfeld et al. ...
-
bioRxiv - Immunology 2024Quote: ... China), using Chromium Single Cell 3’ Reagent Kits v2 (from 10x Genomics, Pleasanton, CA, USA) and NovaSeq 6000 System (Illumina, San Diego, CA, USA) respectively ...
-
bioRxiv - Genomics 2019Quote: ... and Kraken 2.0.8-beta (54) were used to identify the best matching species for each 10x Chromium genomic DNA read (from Illumina HiSeq X and HiSeq4000 platforms). Our Kraken database contained 17 Old World monkey genomes and 19 Plasmodium genomes downloaded from NCBI FTP in June 2018 (52) ...
-
bioRxiv - Immunology 2021Quote: ... Libraries were prepared following 10X Genomics protocols (Chromium Single Cell 3’ Reagent Kits v2 Chemistry) and sequenced on NovaSeq 6000 (Illumina S2 flow cell, paired-end). FASTQ files were processed using cellranger (https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger ...
-
bioRxiv - Genetics 2022Quote: ... of the parental and the F1 fish were based on whole-genome sequencing of the parents (5– 10X coverage; Illumina Hiseq platforms, BGI Hong Kong) and DarTseq (Diversity Arrays Technology ...
-
bioRxiv - Immunology 2022Quote: Identity of virus stocks were confirmed by next-generation sequencing using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). RNA was purified from Trizol-inactivated material using a Direct-zol RNA Miniprep kit (Zymo Research ...
-
bioRxiv - Microbiology 2022Quote: ... Passage 1 virus stocks were further produced in Vero TMPRSS2 cells and the presence of mutations was confirmed by Illumina sequencing ...
-
bioRxiv - Microbiology 2022Quote: ... Genomic DNA was extracted from the final Δrv3645 RLC12 library stock and library quality was validated by deep sequencing (see Genomic DNA extraction and library preparation for Illumina sequencing).
-
bioRxiv - Cancer Biology 2023Quote: ... Triplicates were pooled for a target total cell number of 60,000 in 50uL to load less than 20uL into the 10X controller or perform TDE1-based tagmentation reactions on small volumes (Illumina Tagment DNA TDE1 Enzyme and Buffer Kit). The 10X Genomics Chromium Platform was used to generate a targeted 5,000 single cell Gel Bead-In-Emulsions (GEMs ...
-
bioRxiv - Microbiology 2020Quote: ... 0.75 M sucrose) and R1804M Ready-Lyse lysozyme solution (Illumina, USA). After 15 minutes of incubation at 37°C ...
-
bioRxiv - Microbiology 2019Quote: ... PCR mixtures for amplification contained (per 25 µl reaction): 0.5 µl of each primer (515F and 806R with Illumina tags; 10 µM stock concentration), 12.5 µl of 2x KAPA HiFi Hotstart Readymix (Kapa Biosystems ...
-
bioRxiv - Neuroscience 2021Quote: ... genomic DNA was extracted using QuickExtract ™ DNA Extraction Solution (Illumina, USA), and PCR amplification using primers encompassing the CRISPR target site ...
-
bioRxiv - Plant Biology 2022Quote: ... Five μL of this solution was added to 995μL of HT1 (Illumina) to give a final concentration of 10pM ...
-
bioRxiv - Bioengineering 2019Quote: ... DNA extraction was performed using QuickExtract DNA extraction solution (Epicentre, Illumina, Madison, WI) according to the manufacturer’s instruction ...
-
bioRxiv - Cancer Biology 2021Quote: ... TN5 transposase was added to the buffer solution (Nextera DNA-library preparation kit, Illumina, Cat# FC-121-1030 ...
-
bioRxiv - Molecular Biology 2023Quote: ... The RNA solution was then applied to the HiSeq 3000 system (Illumina, CA, USA). Read count data were processed using Cell Ranger (10X Genomics ...
-
bioRxiv - Microbiology 2019Quote: ... 1.8 pM of DNA solution was sequenced on an Illumina NextSeq 500 sequencer (Illumina, San Diego, CA) using a 300 cycle (2 x 150 bp ...
-
bioRxiv - Neuroscience 2023Quote: ... The DNA was then suspended in Low TE solution from the AmpliSeq for Illumina kit (Illumina, 20019103) and kept on beads at -20℃ until MPAS analyses.
-
bioRxiv - Microbiology 2023Quote: ... Libraries were pooled into a 4 nM solution and sequenced on the Illumina MiSeq platform (Illumina; San Diego; CA) with a target sequencing yield of 500MB-1GB per virome.
-
bioRxiv - Immunology 2022Quote: ... Samples were processed for bulk RNA-sequencing by Q2 solutions using the TruSeq Stranded mRNA kit (Illumina: RS-122-2103) for library preparation ...
-
bioRxiv - Cancer Biology 2019Quote: ... The samples were processed using the 10x Genomics Chromium 3’ Gene Expression Solution (version 2) based on manufacturer instructions and sequenced using a NextSeq 500 sequencer (Illumina).
-
bioRxiv - Physiology 2019Quote: ... The input was quantified by using Qubit RNA BR Assay Kit and RNA-seq was conducted using NextSeq Series RNA-seq Solution (Illumina) at the Center of Genomics and Bioinformatics ...
-
bioRxiv - Molecular Biology 2023Quote: ... Libraries were prepared using the Illumina TruSeq Stranded Total RNA kit with ribosomal depletion by Ribo-Zero Gold solution from Illumina according to the manufacturer’s protocol and sequenced on an Illumina HiSeq 4000 (2× 75 bp).
-
bioRxiv - Molecular Biology 2021Quote: ... Libraries were prepared using an Illumina® TruSeq® Stranded Total RNA kit with ribosomal depletion by Ribo-Zero Gold solution from Illumina® according to the manufacturer’s protocol and sequenced on an Illumina® HiSeq 4000 (2x 75 bp).
-
bioRxiv - Developmental Biology 2020Quote: ... The resulting crude nuclear pellet was then resuspended in 50 ul of tagmentation solution (1x TD buffer (Illumina, San Diego, CA 20034197), 33% PBS ...
-
bioRxiv - Genetics 2021Quote: Tagmentation plates were prepared by the combination of 420 uL of 1400 nuclei/uL solution with 540 uL 2X TD Buffer (Nextera XT Kit, Illumina Inc. FC-131-1024). From this mixture ...