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Citations for Illumina :
1 - 50 of 187 citations for Polybrominated Diphenyl Ether Surrogate Spiking Stock 10X Solution 13C12 99% since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2020Quote: ... with a spiking of 20% PhiX control library (Illumina, San Diego, CA).
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bioRxiv - Molecular Biology 2023Quote: ... 1μl of adaptors (1μl of a 1:250 dilution of Illumina stock solution), 2.5μl water and 1.5 ml of NEB Quick ligase (NEB ...
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bioRxiv - Microbiology 2022Quote: ... spiking with PhiX and sequencing with 2 x 250 bp paired-end reads with Illumina MiSeq (Illumina, San Diego, CA, USA).
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bioRxiv - Immunology 2023Quote: ... using the Chromium Single Cell Gene Expression Solution 3’ v2 (10x Genomics) and sequenced by the DNA Sequencing Facility (RRID: SCR_017759) using NovaSeq6000 (Illumina) with read lengths of 29-bp + 90-bp (Read1 + Read2) ...
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bioRxiv - Cancer Biology 2021Quote: ... Cells were captured using the 10X Chromium system (10X Genomics) and sequenced with the NextSeq 500 (Illumina). Analysis is described in Supp ...
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bioRxiv - Immunology 2019Quote: Single-cell RNA-sequencing libraries were generated using the 10x Genomics Single Cell 3’ Solution (version 2) kit and sequenced to an average depth of > 200k reads/cell (Illumina HiSeq 4000). Data analysis was performed using Python3 pipelines (https://github.com/sansomlab/tenx ...
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bioRxiv - Genomics 2020Quote: ... 10X Chromium libraries were prepared using the Chromium Genome Reagent Kit (10x Genomics, Pleasanton, CA) followed by Illumina HiSeqX sequencing (150bp paired-end reads) ...
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bioRxiv - Neuroscience 2020Quote: ... by following manufacturer’s instructions (Illumina, 10x Genomics) (CG000183_ChromiumSingleCell3’_v3_UG_RevA) ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were prepared according to the manufacturer’s protocol using 10X Single-Cell 3’ v3.1 chemistry (10X Genomics, PN-1000128) and sequenced on the NovaSeq platform (Illumina).
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bioRxiv - Developmental Biology 2021Quote: Three samples were processed using 10X Single Cell 3’ GEX version 3 (10X Genomics) and sequenced on a NovaSeq 6000 S4 PE (Illumina) at UCLA Technology Center for Genomics & Bioinformatics ...
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bioRxiv - Physiology 2021Quote: ... The single cell ATAC analysis was conducted using a 10X Chromium single cell system (10X Genomics) and a NovaSeq 6000 sequencer (Illumina) at the Indiana University School of Medicine Center for Medical Genomics Core ...
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bioRxiv - Neuroscience 2022Quote: ... scRNA-seq libraries were prepared with the Chromium Single Cell 3′ Library & Gel Bead Kit v.3 (10x Genomics, PN-1000075).Ready 10X libraries were sequenced paired end (R1:28, R2: 89 cycles) on NovaSeq (Illumina).
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bioRxiv - Developmental Biology 2023Quote: ... cDNA libraries were prepared using the 10X Genomics 3’mRNA-seq workflow (10X Genomics) and sequenced using a NovaSeq instrument (Illumina). Data was processed using CellRanger (10X Genomics ...
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bioRxiv - Neuroscience 2020Quote: ... by following manufacturer’s instructions (Illumina; 10x Genomics, CG000183_Rev_A). To avoid lane bias ...
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bioRxiv - Neuroscience 2020Quote: ... The cell solutions were immediately transferred to ice and transported to the Wellcome Trust Centre for Human Genetics (WTCHG) for scRNAseq via 10x genomics chromium (10x genomics, US) (Single Cell 3’ v3) and Illumina hiseq 4000 (Illumina, US). This approach achieved 66-72K mean reads per cell and a sequencing depth of 53-55% per cell before filtering.
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bioRxiv - Microbiology 2020Quote: ... Barcoded sequencing libraries were prepared using the 10X Genomics Chromium™ platform (10X Genomics) and were sequenced using an Illumina HiSeq4000 machine (Illumina) with a read length of 2×151bp and a depth of 30-500 million reads per sample ...
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bioRxiv - Molecular Biology 2021Quote: ... All single cell sequencing libraries were generated using 10x Chromium Next GEM v3.1 kits (10x Genomics) and sequencing was performed on a Novaseq6000 system (Illumina, San Diego, California), using an S2 v1.5 100 cycles flow cell (Illumina ...
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bioRxiv - Genomics 2022Quote: ... we followed the strategies described by Bishara et al.19 for library preparation on a 10x Chromium System (10x Genomics, CA, USA) and performed sequencing on an Illumina HiSeq 2500 (Illumina, CA, USA). For long-read sequencing ...
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bioRxiv - Cancer Biology 2021Quote: ... Sample processing through 10X Genomics and NextSeq 500 (Illumina) sequencing was performed by the Washington University Genome Technology Access Center (gtac.wustl.edu) ...
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bioRxiv - Neuroscience 2023Quote: 10X libraries were either sequenced on Novaseq 6000 (Illumina) or MGISEQ-2000 (BGI ...
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bioRxiv - Neuroscience 2024Quote: ... 10x libraries were sequenced twice: shallow on NextSeq500 (Illumina) to determine library quality and more in depth using NovaSeq6000 (Illumina) ...
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bioRxiv - Developmental Biology 2022Quote: ... Cells were used for the preparation of single-cell libraries using the 10X Genomics Chromium system (10X Genomics, Pleasanton, CA) and sequenced with an Illumina NovaSeq 6000 (Illumina, San Diego, CA) by the KUMC Genome Sequencing Facility (Kansas City ...
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bioRxiv - Developmental Biology 2023Quote: 10X genomics libraries were sequenced using a NovaSeq 6000 (Illumina) and FASTQ files were aligned using Cell Ranger (7.0.0 ...
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bioRxiv - Systems Biology 2020Quote: ... The stocks were also validated by Illumina sequencing (see below).
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bioRxiv - Cancer Biology 2020Quote: ... all the 10X samples were sequenced on a HiSeq4000 sequencer (Illumina), and some of the samples (Table S2 ...
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bioRxiv - Cell Biology 2022Quote: ... All 10x GEX libraries were sequenced HiSeq4000 or NovaSeq6000 instruments (Illumina) with the following sequencing parameters ...
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bioRxiv - Cell Biology 2022Quote: ... All 10x Multiome ATAC libraries were sequenced on NovaSeq6000 instruments (Illumina) with the following sequencing parameters ...
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bioRxiv - Genomics 2022Quote: ... All 10x Multiome ATAC libraries were sequenced on NovaSeq6000 instruments (Illumina) with the following sequencing parameters ...
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bioRxiv - Microbiology 2022Quote: ... This seed stock was sequence verified by Illumina Next-Generation Sequencing to confirm the genome stability and avoid introduction of adventitious mutations and certified mycoplasma-free by PCR ...
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bioRxiv - Cell Biology 2019Quote: ... as per the manufacturer’s instructions (10x Genomics Inc, CA; Illumina Inc, CA).
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bioRxiv - Molecular Biology 2021Quote: ... 10X GemCode library sequencing was conducted with a NextSeq 500 instrument (Illumina) using 150-bp paired-end reads with a NextSeq 500 High Output Kit (300 cycles).
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bioRxiv - Genomics 2020Quote: ... All 10x libraries were pooled and sequenced on a NovaSeq 6000 (Illumina).
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bioRxiv - Genomics 2021Quote: ... All 10x scATAC libraries were sequenced on NextSeq500 and NovaSeq6000 instruments (Illumina) with the following sequencing parameters ...
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bioRxiv - Microbiology 2022Quote: ... The sequences of viral stocks were confirmed by Illumina HiSeq 2500 sequencing.
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bioRxiv - Developmental Biology 2021Quote: ... 4 nM 10X scATAC-seq library was sequenced on a NextSeq500 platform (Illumina) using NextSeq 500/550 High Output Kit v2.5 (75 Cycles ...
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bioRxiv - Developmental Biology 2021Quote: ... 4 nM 10X scRNA-seq libraries were sequenced on a NextSeq500 platform (Illumina) using NextSeq 500/550 High Output Kit v2.5 (150 Cycles ...
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bioRxiv - Molecular Biology 2021Quote: ... The 10X GemCode library sequencing was conducted with a NextSeq 500 instrument (Illumina) using 150-bp paired-end reads with a NextSeq 500 High Output Kit (300 cycles).
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bioRxiv - Genetics 2020Quote: ... Barcoded libraries were sequenced using HiSeq4000 (Illumina, one lane per 10x chip position) with 50bp or 75bp paired end reads to an average depth of 40,000-60,000 reads per cell.
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bioRxiv - Genomics 2023Quote: ... combining the use of 10X linked short reads (Illumina NovaSeq 6000, 2×150bp) for base accuracy ...
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bioRxiv - Neuroscience 2019Quote: ... The FOS+ and FOS- 10x libraries were sequenced together on a HiSeq 2500 (Illumina) machine ...
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bioRxiv - Evolutionary Biology 2022Quote: ... We also removed additional scaffolds that had low coverage (< 10x Illumina short-read converge).
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bioRxiv - Developmental Biology 2021Quote: ... Cell Ranger v3.0 (10X Genomics) was used to demultiplex raw base call files from Illumina sequencing and to align reads to the Zebrafish reference genome (Ensembl GRCz11.96) ...
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bioRxiv - Microbiology 2020Quote: ... the cDNA libraries were sequenced on the Illumina 10x Genomics Chromium platform (Illumina Novaseq 6000).
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bioRxiv - Evolutionary Biology 2021Quote: ... 50 Kb long-read libraries were prepared using the 10X Genomics (Illumina Hiseq X Ten) platform ...
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bioRxiv - Genetics 2019Quote: Raw reads were demultiplexed using CellRanger (v2.0.0, 10X Genomics) using the ‘mkfastq’ in conjunction with ‘bcl2fastq’ (v2.17.1.14, Illumina) functions ...
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bioRxiv - Immunology 2021Quote: ... the cDNA libraries were sequenced on the Illumina 10x Genomics Chromium platform (Illumina Novaseq 6000). An average of 18 895 reads per cell in #12 PBL and 30 540 mean reads per cell in #29 PBL were obtained ...
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bioRxiv - Developmental Biology 2023Quote: ... were demultiplexed and transformed into fastq files using 10x Cellranger pipeline version 3.1.0 [45] and bcl2fastq v2.19.0.316 (Illumina). The resulting matrices were loaded into the Seurat package v4.0.1 [46] for R v4.0.2 [47] applying standard quality control ...
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bioRxiv - Systems Biology 2023Quote: ... allowing 4 lanes of 10x to be sequenced per NovaSeq S1 flow cell (Illumina #20028319) using a 28bp read 1 ...
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bioRxiv - Immunology 2023Quote: Cell Ranger v3.0 (10X Genomics) was used to demultiplex raw base call files from Illumina sequencing and to align reads to the Zebrafish reference genome (Ensembl GRCz11.96) ...
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bioRxiv - Genomics 2020Quote: ... Libraries were prepared according to manufacturer’s instructions (10x Genomics) and sequenced on the Next-seq (Illumina) at the Johns Hopkins University Transcriptomics and Deep Sequencing Core.