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Citations for Illumina :
51 - 100 of 157 citations for CKLF Like MARVEL Transmembrane Domain Containing 7 CMTM7 Antibody since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... we used FASTQ files containing single-end reads generated by Illumina sequencing ...
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bioRxiv - Genetics 2019Quote: ... An average of 39.7 million 2 x 75 bp paired- end reads were generated for each sample on an Illumina NextSeq 500 (Illumina, Carlsbad, CA). FastQC was used to evaluate the quality of the reads ...
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bioRxiv - Genomics 2020Quote: ... using 5% PhiX without dark cycles (n = 11) or 10-20% PhiX with 7 dark cycles (protocol provided by Illumina, n = 49). A maximum of 12 samples were pooled in one sequencing run resulting in 19.05 million [17.05 – 21.72] single-end reads per sample on average (supplementary table 3).
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bioRxiv - Microbiology 2021Quote: ... The 8 pM library containing 15% PhiX control v3 (Illumina Canada, Canada) was sequenced on a MiSeq instrument (Illumina Inc ...
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bioRxiv - Evolutionary Biology 2021Quote: ... The EcoT22I GBS libraries (now containing ID tags and Illumina flowcell adaptors) were purified again using the QIAquick PCR Purification Kit (Qiagen) ...
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bioRxiv - Plant Biology 2022Quote: ... Raw reads containing adapter sequences were trimmed using bcl2fastq (Illumina, United States), and nucleotides with low-quality (QV < 25 ...
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bioRxiv - Evolutionary Biology 2019Quote: ... corresponding to either the Australian or American samples were pooled and run on 7 lanes of the Illumina NextSeq 500 sequencer (Illumina, San Diego, USA) in 75bp paired-end reads mode.
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bioRxiv - Evolutionary Biology 2019Quote: ... we added four mate pair libraries (3 kb, 5 kb, 7 kb, 8 kb) prepared using a Nextera Mate Pair Library Prep kit (Illumina, San Diego, CA, USA). Each library was sequenced on an Illumina HiSeq 2500 sequencer by Novogene (Sacramento ...
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bioRxiv - Cell Biology 2021Quote: ... with RNA integrity number higher than 7 was used for library preparation using the TruSeq Stranded mRNA Library Preparation Kit (Illumina, San Diego, CA, USA) and sequenced on a NextSEq500 (Illumina) ...
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bioRxiv - Genomics 2020Quote: ... The pooled library was quality controlled via sequencing at a concentration of 1.7 pM with 35% PhiX on a NextSeq 500 using a mid-output v2 kit (single-end 75 nucleotides, Illumina, San Diego, CA, USA), resulting in an average sequencing depth of 1 million reads ...
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bioRxiv - Genomics 2020Quote: ... Both re-pooled libraries were then sequenced at a final concentration of 1.7 pM with 25% PhiX on a NextSeq 500 using a high output v2 kit (single-end, 75 nucleotides, Illumina, San Diego, CA, USA), resulting in an average sequencing depth of 9 million reads (range 817 469 – 41.7 million reads).
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bioRxiv - Genetics 2019Quote: ... The coding and splice-site regions of genes susceptible to hereditary arrhythmia and cardiomyopathies(10) were sequenced for probands II:3 and III-7 using Illumina HiSeq2500 Analyzer (Illumina, San Diego, CA, USA)(11) ...
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bioRxiv - Immunology 2022Quote: ... tagmented cDNA was amplified with Nextera PCR Mastermix containing Nextera i5 primer (Illumina), and custom i7 primer mix ...
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bioRxiv - Evolutionary Biology 2022Quote: ... fusion primers (i.e. containing partial adapters sequences specific of respectively Illumina or ONT) were used for the first PCR ...
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bioRxiv - Systems Biology 2023Quote: ... Transposase treatment was performed in 10ul volume containing 1xTD buffer (Nextera kit, Illumina), 0.5ul “home-made” Tn5 transposase adapter complex and 0.4mg/ml digitonin (Promega ...
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bioRxiv - Neuroscience 2023Quote: ... The final libraries containing the P5 and P7 primers were generated by Illumina bridge amplification ...
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bioRxiv - Molecular Biology 2024Quote: ... QHR-4C libraries were constructed with specific primer pairs (forward primers containing Illumina P5 with sequences near a specific viewpoint and reverse primers containing Illumina P7 with an index and sequences matching the adapter ...
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bioRxiv - Immunology 2021Quote: ... One pooled library containing 26 samples were sequenced on a NextSeq 500 sequencer (Illumina) using paired-end 38-base reads ...
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bioRxiv - Genetics 2020Quote: ... Pooled and denatured library (8 pM) containing 5% volume of PhiX (control library; Illumina) was sequenced using the Illumina MiSeq system with MiSeq Reagent Kit V3 (300-bp paired-end reads ...
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bioRxiv - Cancer Biology 2022Quote: ... Precipitated chromatin was washed and incubated in Tagmentation buffer containing Tn5 transposase enzyme (Illumina). Samples were reverse crosslinked for 4 hours at 65°C ...
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ARID1a protects against steatosis and insulin resistance via PPARalpha-mediated fatty acid oxidationbioRxiv - Cell Biology 2019Quote: ... cell pellets were resuspended and incubated in transposition mix containing Tn5 transposase (Illumina, California, USA) at 37 °C for 30 minutes ...
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bioRxiv - Cancer Biology 2021Quote: Four 3’ PCR primers were used each containing a unique index (underlined) recognized by Illumina:
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bioRxiv - Genomics 2021Quote: ... Transposition reaction mix containing transposition buffer and 2.5 ul of Tn5 enzyme per sample (Illumina) was added to the pellet and incubated for 30 min at 37 C ...
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bioRxiv - Evolutionary Biology 2022Quote: ... An initial multiplex PCR containing locus-specific primers with Illumina (Illumina, Inc., San Diego, CA) priming sites for 229 amplicons was performed ...
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bioRxiv - Synthetic Biology 2022Quote: ... adding barcodes to identify the sample (primers P3-P15 in Supplementary Table 3, containing Illumina Nextera tagmentation adapters and ...
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bioRxiv - Genomics 2023Quote: ... The nuclei were resuspended with 30 μl of loading buffer containing 1x TB1 (Illumina Inc.), 1x standard storage buffer (Illumina Inc.) ...
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bioRxiv - Synthetic Biology 2023Quote: ... The resultant recombinants containing known donor barcodes and unknown recipient barcodes were sequenced by Illumina MiSeq platform ...
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bioRxiv - Plant Biology 2024Quote: ... and second strand synthesis buffer (containing dNTPs, RNase H and E. coli polymerase I, Illumina) was added so that the second strand was produced by nick-translation ...
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bioRxiv - Neuroscience 2021Quote: ... resuspended in 25 μl of 1X transposition buffer containing 2 μl of Tagment DNA Enzyme (Illumina) and incubated at 37°C for 30 min in a thermocycler ...
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bioRxiv - Neuroscience 2020Quote: ... poly(A) containing mRNA was purified and libraries were prepared using TruSeq Stranded mRNA kit (Illumina). Unstranded libraries with a mean fragment size of 150bp (range 100-300bp ...
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bioRxiv - Cancer Biology 2022Quote: ... Illumina compatible adaptors (PE1/PE2) containing single-direction indexes (Access Array™ Barcode Library for Illumina® Sequencers-384 ...
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bioRxiv - Genetics 2022Quote: ... The flow cell was loaded with 5 picomolar pooled libraries containing 5% PhiX control V3 (Illumina). Raw sequencing data were demultiplexed with Bcl2Fastq software (v2.19 ...
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bioRxiv - Immunology 2023Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme (Nextera DNA Sample Prep Kit (Illumina)) ...
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bioRxiv - Neuroscience 2023Quote: ... and nuclei were resuspended in 200μl transposition mix (1x TD buffer containing X µl of Illumina Tagment DNA TDE1 Enzyme per every X nuclei) ...
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bioRxiv - Cancer Biology 2024Quote: ... Nuclei were resuspended in 50 μL tagmentation reaction containing 25 μL 2X tagmentation buffer (Illumina 15027866), 16.5 μL PBS ...
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bioRxiv - Genomics 2019Quote: ... Frozen nuclear pellets of 2.5 × 104 PSCs were thawed on ice and tagmented in total volume of 25μl in permeabilization buffer containing digitonin and 2.5μl of Tn5 from Nextera DNA Library Preparation Kit (Illumina) for 45-75min at 37°C in a thermomixer (500 RPM shaking) ...
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bioRxiv - Genetics 2022Quote: ... Individual sequencing barcodes were added to each sample by amplifying the 20 μL elution in a 50 μL Q5 NEBNext reaction with 0.5 uM of TruSeq_Universal_Adapter primer and a reverse primer containing a unique 8 bp index (Illumina_Multiplex) for sample demultiplexing post-sequencing ...
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bioRxiv - Cancer Biology 2022Quote: ... The nuclei were centrifuged at 500g for 5 minutes at 4°C and subsequently resuspended on ice in 50μl transposase reaction buffer containing 2.5μl of Tn5 transposase and 25μl of 2xTD buffer (Nextera DNA Sample preparation kit from Illumina). After incubation at 37°C for 30 minutes ...
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bioRxiv - Immunology 2020Quote: ... resuspended in 50 μl 1xTD buffer containing 2.5 μl TDE1 transposase (Illumina Nextera DNA Sample Preparation Kit), and incubated for 30 min at 37°C ...
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bioRxiv - Neuroscience 2021Quote: ... Beads were then resuspended in 25μL of tagmentation reaction mix containing 12.5μL of 2x Tagmentation DNA Buffer (Illumina #15027866) and 1μL of Tagment DNA Enzyme (Illumina #15027865) ...
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bioRxiv - Genomics 2020Quote: ... Nuclei pellets were collected by centrifugation and resuspended with transposition reaction buffer containing Tn5 transposases (Illumina Nextera TDE1). Transposition reactions were incubated at 37°C for 30 min ...
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bioRxiv - Cancer Biology 2021Quote: ... Nuclei were isolated from approximately 50,000 cells in lysis buffer containing 0.1% NP-40 and 0.01% Digitonin and were fragmented with Nextera Tn5 Transposase (TDE1, Illumina) in TD Tagment DNA buffer (Illumina ...
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bioRxiv - Microbiology 2020Quote: ... to a final concentration of 2 nM containing 15% PhiX V3 library control (Illumina, San Diego, CA, USA), the library pools were denatured for 5 min in an equal volume of 0.2M NaOH ...
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bioRxiv - Genomics 2019Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme from the Nextera DNA Sample Prep Kit (Illumina) and incubated at 37°C for 10 min followed by 2x washing in RIPA-LS and TE (10mM Tris-HCL ...
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bioRxiv - Neuroscience 2021Quote: ... Nuclei were then resuspended in 50 ul 1x TD Buffer containing 2.5 ul Tn5 enzyme from Nextera (Illumina) and incubated for 30 min at 37°C ...
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bioRxiv - Developmental Biology 2022Quote: ... nuclei were extracted from cells and treated with transposition mixture containing Nextera Tn5 Transposase (Illumina, FC-121-1030) for 30 minutes at 37°C with 1000 RPM mixing ...
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bioRxiv - Genomics 2022Quote: ... Nuclei pellets were resuspended in 50 μL transposition reaction containing 2.5 μL Tn5 transposase (FC-121-1030; Illumina). The reaction was incubated in a 37°C heat block for 45 min ...
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bioRxiv - Microbiology 2022Quote: ... Six samples per condition containing 4 μg of total RNA were used for TruSeq mRNA library preparation (Illumina) after being treated with Globin-Zero Gold rRNA Removal Kit (Illumina) ...
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bioRxiv - Developmental Biology 2023Quote: ... Isolated nuclei were mixed with 50 µl of transposition reaction mix containing Tagment DNA Enzyme 1 (Illumina, 20034197). Samples were incubated using a thermo shaker at 37°C ...
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bioRxiv - Genomics 2023Quote: ... 12.5 μl of a master mix containing 7.5 μl of Nextera PCR Master Mix (Illumina, FC-131-1096) and 2.5μl of each Index primer i7 (Illumina ...