Labshake search
Citations for Illumina :
1 - 50 of 340 citations for 8 16 Pyranthrenedione since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2021Quote: ... Libraries were sequenced 2 * 50+8+16 bp on a HiSeq2500 sequencer (Illumina). RNA-seq data were processed according to Doyle et al ...
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bioRxiv - Genomics 2020Quote: ... Multiple mate-paired libraries (3, 8, 12 and 16 kb) were also constructed using the Nextera Mate-Paired Library Construction kit (Illumina). Libraries were sequenced on the Illumina HiSeq 2500 sequencer using the Illumina TruSeq PE Cluster kit v3 and TruSeq SBS kit v3 (101 ...
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bioRxiv - Cancer Biology 2021Quote: ... and 100 μl from the 16 pM pool were loaded into each well of an 8-well strip tube and placed onto a cBot (Illumina) for cluster generation ...
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bioRxiv - Microbiology 2020Quote: ... To sequence 16S amplicons by Illumina MiSeq platform ...
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bioRxiv - Microbiology 2019Quote: Amplification and purification of V3-V4 regions of the 16S rRNA genes were performed according to the 16S Metagenomic Sequencing Library Preparation protocol (13) from Illumina ® with the following modifications ...
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bioRxiv - Microbiology 2020Quote: ... 2 ng of DNA was used for amplicon PCR and the product used for 16S rDNA amplicon library preparation following the 16S Metagenomic Sequencing Library Preparation guide provided by Illumina. The Arch349F - Arch915R primer pair was used to amplify the archaeal V3-V5 region and the Bact341F - Bact785R primer pair for the bacterial V3-V4 region (Table S1) ...
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bioRxiv - Microbiology 2019Quote: ... using a modified PowerWater® Sterivex™ DNA Kit and from cryoconite using a PowerBiofilm™ RNA Isolation Kit (MO BIO Laboratories) prior to 16S rRNA gene and 16S rRNA (cDNA) quantitative PCR (qPCR) and V3-V4 region MiSeq (Illumina) sequencing ...
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bioRxiv - Neuroscience 2022Quote: ... The regions V3 and V4 of the bacterial ribosomal RNA 16S gene were amplified and purified according to 16S Metagenomic Sequencing Library Preparation protocol by Illumina. A paired-end sequencing of 300 cycles per read was performed ...
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bioRxiv - Microbiology 2024Quote: The V3–V4 hypervariable regions of the 16S rRNA gene were amplified and library preparation was performed following the 16S Metagenomic Sequencing Library Preparation protocol (Illumina) and the Nextera technology to index libraries ...
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bioRxiv - Genetics 2021Quote: ... Japan where 16S rRNA amplicon sequencing (Illumina MiSeq) and the bioinformatics analysis was performed ...
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bioRxiv - Microbiology 2020Quote: 16S rRNA gene sequences were retrieved from Illumina and PacBio reads ...
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bioRxiv - Plant Biology 2021Quote: The 16S rRNA gene amplicons generated by Illumina MiSeq were used to estimate the diversity and composition of the bacterial communities present in both the rhizosphere and root of each Test Phase Brassicaceae sample ...
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bioRxiv - Microbiology 2022Quote: ... following a modified 16S rRNA protocol from Illumina for use with the Nextera XT kit ...
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bioRxiv - Microbiology 2023Quote: The 16S rRNA gene amplicons generated by Illumina MiSeq were used to estimate the diversity and composition of the bacterial communities present in each soil and MSB sample ...
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bioRxiv - Microbiology 2022Quote: BLAST searches were done to directly compare sequence identities in a pair-wise manner for the three sequencing strategies (ONT 16S rRNA gene amplicons, Illumina 16S rRNA gene amplicons, and Illumina metagenomes). A custom searchable database was created from the ONT sequences using the command makeblastdb ...
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bioRxiv - Molecular Biology 2020Quote: ... 12 times 8 Nextera (Illumina) based primer combinations were used ...
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bioRxiv - Microbiology 2021Quote: ... 8) DC3000 − B (Illumina only), 9 ...
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bioRxiv - Microbiology 2022Quote: Amplicon libraries were prepared according to (16) using published 16S and 18S rRNA gene primers (Table S1) and by sequencing via the MiSeq platform (Illumina Inc., USA). Raw sequence reads were processed following a bioinformatic pipeline in Deng et al ...
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bioRxiv - Immunology 2019Quote: ... The adaptor sequences for 16S metagenomic library preparation (Illumina) were added to the 5□ ends of the primers designed ...
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bioRxiv - Plant Biology 2020Quote: ... we analysed 16S rRNA gene sequences (Illumina MiSeq platform) recovered from publicly available and newly generated data on seagrass roots and sediments across 14 seagrass species and 10 countries (Fig ...
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bioRxiv - Microbiology 2020Quote: ... PCR amplification followed Earth Microbiome Project recommendations (“16S Illumina Amplicon Protocol ...
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bioRxiv - Microbiology 2022Quote: ... region was amplified using the primer set (16S-341F/805R, see Table S2 for nucleotide sequences) according to the 16S Metagenomic Sequencing Library Preparation procedure (Illumina; San Diego, CA). The success of PCR amplification was confirmed using agarose electrophoresis (1.5%) ...
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bioRxiv - Genetics 2020Quote: ... The V3–V4 hypervariable regions of the bacterial 16S rRNA were amplified with a two-step barcoding approach according to the Illumina 16S Metagenomic Sequencing Library Preparation (Illumina, San Diego, CA, USA). Library quantification was determined using the Agilent 2100 Bioanalyzer System (Agilent ...
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bioRxiv - Microbiology 2021Quote: ... by 7 cycles PCR (16S Metagenomic Sequencing Library Preparation, Illumina). The amplicon libraries were purified using Agencourtusing the Agencourt AMPure XP system (Beckman) ...
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bioRxiv - Systems Biology 2023Quote: 16S amplicon sequencing was run on a MiSeq (Illumina, USA) with either paired-end 300-bp protocol (DNA Genotek ...
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bioRxiv - Microbiology 2023Quote: ... Samples were depleted of 16S rRNA using RiboZero reagent (Illumina) and Truseq stranded-RNA Zero libraries were generated (Illumina ...
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bioRxiv - Microbiology 2019Quote: ... The 16S rRNA amplicon library was sequenced with the MiSeq (Illumina). Amplicons were cleaned up and normalized with the SequalPrep Normalization Plate Kit (ThermoFisher Scientific ...
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bioRxiv - Microbiology 2021Quote: ... 16S rRNA gene sequencing was performed using a MiSeq platform (Illumina) at the DNA sequencing facility of GenProbio srl (www.genprobio.com ...
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bioRxiv - Systems Biology 2020Quote: ... and using the 16S Metagenomic Sequencing Library Preparation protocol from Illumina. Next-generation sequencing involved procedures previously described [23] ...
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bioRxiv - Microbiology 2021Quote: ... following the protocol entitled “16S Metagenomic Sequencing Library Preparation” from Illumina [17] ...
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bioRxiv - Microbiology 2023Quote: ... library tagmentation and 16-cycle PCR amplification using Nextera XT (Illumina), and 150 bp paired-end sequencing using an Illumina MiSeq or NextSeq.
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bioRxiv - Microbiology 2020Quote: ... Libraries were prepared according to the 16S Metagenomic Sequencing Library Preparation (Illumina) protocol using the primer pair Bakt_341F (5’-CCTACGGGNGGCWGCAG-3’ ...
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bioRxiv - Microbiology 2020Quote: ... 16S metagenomic sequencing library construction was performed using Illumina guidelines (Illumina, U.S.A). The 16S ribosomal primers used were V3 (tcgtcggcagcgtcagatgtgtataagagacagcctacgggnggcwgcag ...
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bioRxiv - Genomics 2022Quote: ... gibbosus individuals we used a dataset consisting of 16 short-read (Illumina) sequencing libraries obtained from male O ...
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bioRxiv - Pathology 2020Quote: ... 16S rRNA gene (V3 region) amplicon sequencing (Illumina, San Diego, CA, USA) and downstream bioinformatics were performed as previously described43 ...
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bioRxiv - Microbiology 2022Quote: ... by sequencing the V3-V4 region of the 16S rRNA gene (Illumina MiSeq platform ...
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bioRxiv - Synthetic Biology 2023Quote: This strategy was designed following the 16S amplicon sequencing protocol from Illumina, using its Nextera XT DNA Library Kit (Illumina #FC-131- 001 ...
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bioRxiv - Microbiology 2023Quote: The V3-V4 region of the 16S rRNA gene was sequenced (Illumina MiSeq platform ...
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bioRxiv - Developmental Biology 2024Quote: Microbial community diversity was assessed by 16S rRNA gene amplicon sequencing (Illumina 2×250 bp MiSeq chemistry ...
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bioRxiv - Microbiology 2024Quote: ... 16S rDNA amplicon samples were sequenced using Illumina MiSeq platform (Illumina Inc.). The raw data were analyzed according to our previous methods [24 ...
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bioRxiv - Microbiology 2021Quote: ... The purified PCR products were then processed and sequenced using the NextSeq 75 – High Output (82 cycles in read 1, 8 cycles in index 1, and 8 cycles in index 2 SE reads) (Illumina). The sequencing data was analyzed using the Model-Based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced Paired-End 151 bases (in addition: 8 bases for index 1 and 8 bases for index 2) setup using the NovaSeq 6000 instrument (Illumina) and the S1 Flow-Cell loaded at a final concentration in Flow-Lane loaded of 340pM and including 1% PhiX.
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Paired-End 51 bases (in addition: 8 bases for index 1 and 8 bases for index 2) setup using the NovaSeq 6000 instrument (Illumina). SP Flow-Cell was loaded at a final concentration in Flow-Lane loaded of 400pM and including 1% PhiX ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Single-reads 76 bases (in addition: 8 bases for index 1 and 8 bases for index 2) on NextSeq 500 (Illumina) using the NextSeq 500 High Output Kit 75-cycles (Illumina ...
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bioRxiv - Microbiology 2019Quote: ... Library preparation was done using the “16S Metagenomic Sequencing Library Preparation” protocol (Illumina) with 5% PhiX control added as an internal control for low diversity libraries ...
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bioRxiv - Zoology 2021Quote: ... Preparing 16S Ribosomal RNA Gene Amplicons for the Illumina MiSeq System (Illumina®) protocol ...
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bioRxiv - Physiology 2022Quote: ... The 16S metagenomic sequencing was performed according to the procedure set by Illumina (San Diego ...
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bioRxiv - Microbiology 2023Quote: ... using the 16S metagenomic sequencing library protocol (Illumina, Inc., San Diego, CA, USA), and amplified using PCR with universal primers 27F-mod (5’-AGRGTTTGATYMTGGCTCAG-3’ ...
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bioRxiv - Microbiology 2023Quote: ... On an Illumina HiSeq 2000 system (Illumina, San Diego, CA; 16 samples/lane), all samples underwent an indexed paired-end sequencing run of 2 ×51 cycles ...
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bioRxiv - Microbiology 2024Quote: ... MinION reads were assembled using IRMA v 0.6.7 (16) and validated by Illumina sequencing as previously described (17) ...