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Citations for Illumina :
401 - 450 of 1545 citations for 3 7 Diethyl 2 hydrazinoquinoline hydrochloride since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2020Quote: 2 × 150-bp pair-end reads deep sequencing data (∼5000X depth) from Illumina platform were converted to fastq format ...
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bioRxiv - Microbiology 2023Quote: ... gRNA abundances (read 1) and UMI barcodes (read 2) were quantified by Illumina sequencing and subsequently processed by the analysis described below.
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bioRxiv - Molecular Biology 2023Quote: ... libraries were pooled and sequenced on NovaSeq S4 2×150-bp run (Illumina). Mapping to the human hg38 genome and peak calling were performed using the ENCODE ATAC-seq pipeline.
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bioRxiv - Immunology 2022Quote: ... Sequencing was carried out on a Novaseq6000 S2 2×50bp flow cell (Illumina) utilizing the Chromium single-cell 5′ and TCR gene expression library preparation (10X Genomics) ...
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bioRxiv - Genomics 2023Quote: ... combining the use of 10X linked short reads (Illumina NovaSeq 6000, 2×150bp) for base accuracy ...
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bioRxiv - Microbiology 2023Quote: ... amplicons were sequenced for 2□×□150 paired-end reads with MiSeq Sequencing (Illumina). The CRISPResso software was used to analyze the deep sequencing data 32.
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bioRxiv - Molecular Biology 2023Quote: ... primarily as paired end 2 × 151 read multiplex runs on MiSeq platform (Illumina). We used the ShapeMapper2 algorithm [17] to determine the mutation frequency in chemically modified (5NIA ...
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bioRxiv - Microbiology 2023Quote: ... The samples were paired end sequenced (2×301 bp) on a MiSeq (Illumina) using a MiSeq Reagent kit v3 ...
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bioRxiv - Microbiology 2023Quote: ... The samples were paired-end sequenced (2×300 bp) on a MiSeq (Illumina) using a MiSeq Reagent kit v3 (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... and sequencing using an Illumina MiSeq (v2, 2 × 150 bp) instrument (Illumina, USA).
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bioRxiv - Immunology 2022Quote: ... Sequencing is performed using the 2*300 MiSeq Reagent Kit v3 (Illumina, Inc.).
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed by GenoScreen (Lille, FR) on MiSeq (Illumina 2*250 bp) using the MiSeq reagent kit v2 (500 cycles).
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bioRxiv - Neuroscience 2024Quote: ... and sequenced on Novaseq 6000 (2×150 paired end, Illumina, San Diego, CA). Data in FASTQ format was quality checked by fastqc software ...
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bioRxiv - Developmental Biology 2024Quote: ... cDNA library preparation and sequencing (Illumina Novaseq SP, 2 × 50 bp read length). Differential expression was filtered by selecting transcripts with fold change ≥ |1.5| and a significance level of P ≤ 0.05 using PartekFlow.
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced using 2 × 300 bp paired end v3 reagent kit (Illumina), following manufacturer’s protocols ...
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bioRxiv - Cell Biology 2023Quote: ... and sequenced on an Illumina HiSeq with 2×150 bp sequencing configuration (Illumina).
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bioRxiv - Plant Biology 2023Quote: ... Paired-end sequencing (2 × 150 bp) was conducted on the NovaSeq 6000 (Illumina).
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bioRxiv - Cell Biology 2024Quote: ... the final pool diluted to 2 nM and sequenced on NovaSeq 6000 (Illumina).
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bioRxiv - Microbiology 2023Quote: ... and subjected to Illumina MiSeq 2 × 150 bp paired-end sequencing by Illumina MiSeq.
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bioRxiv - Developmental Biology 2022Quote: ... and 2 µl of Tn5 Transposase (from Nextera XT DNA Prep Kit, Illumina) were added to the lysates ...
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bioRxiv - Cancer Biology 2022Quote: Paired-end sequencing (2 x 75bp) was performed on a NextSeq 500 (Illumina) with SMART-Seq Stranded Kits (Takara Bio ...
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bioRxiv - Cancer Biology 2022Quote: ... Hi-C libraries were sequenced 2×150bp on a NovaSeq 6000 instrument (Illumina). Juicer were used to process raw reads and generate Hi-C contact matrices (.hic files) ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing reactions were carried out using MiSeq v2 (2×150 bp) chemistry (Illumina) on a MiSeq instrument (Illumina ...
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bioRxiv - Plant Biology 2022Quote: ... and sequencing (paired-end, 2 × 151 cycles, Illumina NovaSeq6000 system at IPK Gatersleben) involved standard protocols from the manufacturer (Illumina Inc. ...
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bioRxiv - Immunology 2023Quote: ... cDNA libraries were generated using the TruSeq Sample Preparation v.2 Guide (Illumina) and paired end-sequenced on the NovaSeq 6000 (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... cDNA Libraries were generated using the TruSeq Sample Preparation v.2 Guide (Illumina) and paired end-sequenced on the NovaSeq 6000 (Illumina ...
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bioRxiv - Cell Biology 2024Quote: ... in paired-end mode (2×40 cycles) and a NextSeq 2000 instrument (Illumina) in paired-end mode (2×50 cycles) ...
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bioRxiv - Physiology 2024Quote: ... Sequencing is performed for 2 x 125 cycles on a HiSeq 2500 (Illumina) using the SBS V4 chemistry (Sequencing by Synthesis) ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed using the NextSeq 500 platform (2 by 75 bp, Illumina) with 10 to 15 million reads per sample.
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bioRxiv - Microbiology 2024Quote: ... Whole genome sequencing was performed in Novaseq platform (Illumina, 2×150 paired-end), obtaining a Q30 of 91.99% and an estimated sequencing coverage of 890X.
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bioRxiv - Cancer Biology 2024Quote: ... and sequenced on a NovaSeq using the 2 x 150 bp protocol (Illumina) for approximately 25-30 million reads per sample ...
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bioRxiv - Cancer Biology 2024Quote: ... and sequenced (>25M 100-bp paired-end (2×100) reads on NovaSeq (Illumina)) with the Yale Center for Genome Analysis (YCGA) ...
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bioRxiv - Cancer Biology 2021Quote: ... libraries were prepared using a Chromium Single Cell 3’ Library & Gel Bead kit v2 (10x Genomics, PN-120237) and sequenced using a NextSeq 500 (Illumina). The mean number of reads per cell was approximately 25,000 and the median number of genes detected per cell was approximately 2,000.
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bioRxiv - Cell Biology 2020Quote: ... Indexed sequencing libraries were constructed using the Chromium Single-Cell 3’ library kit (10X Genomics) and sequenced on NovaSeq 6000 (Illumina) with the following parameters ...
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bioRxiv - Genetics 2021Quote: ... 3) SpliceAI (SAI)11 scores were retrieved using a script adapted from the SAI github repository (https://github.com/Illumina/SpliceAI) which allows spliceAI to score custom sequences ...
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bioRxiv - Microbiology 2022Quote: ... Total RNAs samples (3 μg) were depleted from ribosomal RNA using the bacteria Ribo-Zero® rRNA Removal kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: ... Multiple mate-paired libraries (3, 8, 12 and 16 kb) were also constructed using the Nextera Mate-Paired Library Construction kit (Illumina). Libraries were sequenced on the Illumina HiSeq 2500 sequencer using the Illumina TruSeq PE Cluster kit v3 and TruSeq SBS kit v3 (101 ...
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bioRxiv - Immunology 2020Quote: ... cDNA was harvested and diluted to 0.1–0.3 ng/μl and libraries were prepared in 96-well plates using a Nextera XT DNA Sample Preparation kit (Illumina) according to the protocol supplied by Fluidigm ...
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bioRxiv - Neuroscience 2020Quote: Tagmentation was performed per pool by adding 3 μL double-stranded cDNA sample to 5.5 μL Nextera TD buffer (Illumina, 15027866), 2.5 μL NF H2O and 1.0 μL TDE1 Enzyme (Illumina ...
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bioRxiv - Systems Biology 2020Quote: ... 8 pools of 24 randomized libraries were sequenced in 3 lanes at 100 bp single-end on the HiSeq 2500 (Illumina) using TruSeq SBS Kit v4 reagents (Illumina).
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bioRxiv - Neuroscience 2020Quote: ... The cDNA was then fragmented and amplified for 3’ prime end sequencing with the Nextera XT DNA sample prep kit (Illumina). The libraries were purified ...
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bioRxiv - Genomics 2020Quote: ... sequencing libraries were prepared with the QuantSeq 3’ mRNA-Seq Library Prep Kit FWD (Lexogen) and sequenced on a HiSeq 4000 Sequencing System (Illumina) using the HiSeq3000/4000 SR Cluster and SBS Kit (Illumina).
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bioRxiv - Microbiology 2021Quote: ... the sgRNA coding sequences integrated in the genomic DNA from the initial and 3-times selected populations were amplified by touch-down PCR and sequenced by Illumina deep sequencing ...
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bioRxiv - Molecular Biology 2021Quote: ... 150 ng of RNA was used for library preparation with the Lexogen QuantSeq 3’ mRNA-Seq Library Prep Kit (FWD) from Illumina. Quality control of the sequencing libraries was performed with both Qubit™ (DNA HS Assay kit ...
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bioRxiv - Cancer Biology 2020Quote: The RNA-seq libraries (n=3 per experimental group) were prepared using the NEBNext Ultra II RNA library prep kit from Illumina (New England Biolabs Inc. ...
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bioRxiv - Cancer Biology 2020Quote: ... and the analysis was run using sequencing reads of 3 or higher from 454 data and 10 or greater reads from Illumina. Single cell sequencing was performed as described previously (Mann et al. ...
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bioRxiv - Neuroscience 2022Quote: ... cells were harvested and prepared with 10X Chromium Single Cell 3’ Reagents V3 and sequenced on a NovaSeq 6000 (Illumina) using a S2 flow cell at 2 × 100bp ...
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bioRxiv - Cell Biology 2022Quote: ... RNA library was constructed with 10x-Genomics Single Cell 3’ RNA sequencing kit v3 as previously described(18) sequenced using a NextSeq500 (Illumina). Cell clusters were characterized using an automated annotation tool(19 ...
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Patient-associated mutations in Drosophila Alk perturb neuronal differentiation and promote survivalbioRxiv - Cancer Biology 2022Quote: ... and libraries prepared using the normal workflow for Single Cell 3’ v3 libraries (10X Genomics) and sequenced on the NextSeq 500 platform (Illumina). Initial preprocessing of scRNA-seq datasets began with demultiplexing ...
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bioRxiv - Cancer Biology 2022Quote: ... using primers DCF01 5’-CTTGTGGAAAGGACGAAACACCG-3’ and DCR03 5’-CCTAGGAACAGCGGTTTAAAAAAGC-3’ and subjected to single-end 75 bp (SE75) high-throughput sequencing using a NextSeq550 (Illumina).