Labshake search
Citations for Illumina :
4151 - 4200 of 5691 citations for TD 5108 CAS 866933 46 2 99% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genetics 2024Quote: Total RNA from mouse glomeruli was sequenced on a HiSeq 4000 following standard workflow using NEBNext Ultra II RNA Library Preparation kit (New Englab Biolabs, MA)(Illumina, CA) and paired-end sequencing (Genewiz ...
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bioRxiv - Immunology 2024Quote: ... One library consisting of a total of 4 samples were pooled and sequenced on the NextSeq 2000 (Illumina, San Diego, CA) using a P3 100 cycle kit (Illumina) ...
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bioRxiv - Genetics 2024Quote: ... Amplicon sequencing libraries were prepared as previously described54,70,71 and sequenced with a 1 x 75 single end read on a NextSeq instrument (Illumina, San Diego CA). Individual gRNA reads were extracted from FASTQ files with PoolQ and analyzed for enrichment using MAGeCK72 ...
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bioRxiv - Genomics 2024Quote: ... Methylation was measured from 250 ng of bisulfite-converted DNA using the Illumina EPIC Beadchip (Illumina Inc, San Diego, CA, USA). Quality control and preprocessing for muscle tissue DNAm was carried out from IDATs in the Geroscience Core in the Butler Columbia Aging Center ...
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bioRxiv - Genomics 2024Quote: ... RNA libraries for RNA-Seq were prepared using the Illumina TruSeq Stranded Total RNA Ribo-Zero Plant kit (Illumina, CA, US), and sequenced on the Illumina platform in paired-end mode and 150 bp read-length (Psomagen ...
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bioRxiv - Genomics 2024Quote: ... Methylation was measured from 250 ng of bisulfite-converted DNA using the Illumina EPIC Beadchip (Illumina Inc, San Diego, CA, USA). Quality control and preprocessing for adipose tissue DNAm was carried out from IDATs in the Geroscience Core in the Butler Columbia Aging Center ...
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bioRxiv - Cancer Biology 2024Quote: ... Individually indexed libraries were pooled and sequenced on an Illumina platform (see Supplemental Table 6) to depth of 200M PE reads following the manufacture’s protocols (Illumina, Hayward CA.).
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bioRxiv - Microbiology 2024Quote: ... Amplicon sequencing was performed using 460 bp paired-end sequencing on the Illumina MiSeq platform (Illumina Inc., San Diego, CA, USA) at FASMAC Co. ...
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bioRxiv - Microbiology 2024Quote: The whole genome sequence of the mink-derived H5N1 clade 2.3.4.4b virus was determined using the Illumina MiSeq sequencing platform (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Microbiology 2024Quote: ... Amplicons were sequenced using Illumina’s v3 600-cycle (paired-end) reagent kit on a MiSeq (Illumina Inc., San Diego, CA, USA). Reads were demultiplexed based on the combination of index (CASAVA 1.8 ...
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bioRxiv - Microbiology 2024Quote: ... Sequence libraries were prepared and pooled using the DNA prep and the NextSeq 500 mid-output reagent kits (Illumina, CA, USA). Illumina NextSeq 500 platform ...
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bioRxiv - Molecular Biology 2024Quote: ... The cDNA libraries of the radular tissues were prepared using TruSeq Stranded mRNA Sample Prep Kits (Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2024Quote: ... the genomic DNA extracts were sequenced at an iSeq instrument generating 150 bp paired-end reads (Illumina, San Diego, CA, USA), and with PacBio RSII generating hifi long reads as described in the supporting information ...
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bioRxiv - Genomics 2024Quote: ... and 200 ng of DNA was hybridized to the Brassica 60K array following the manufacturer’s protocol (Illumina Inc., San Diego, CA). The array was scanned using the Illumina HiScan system ...
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bioRxiv - Immunology 2024Quote: ... Bar-coded RNA-Sequencing (RNA-Seq) libraries were generated using the Illumina Stranded mRNA Library Prep Ligation kit (Illumina, CA, USA) and IDT for Illumina RNA UD Indexes (Illumina ...
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bioRxiv - Immunology 2024Quote: ... The bar coded RNA libraries were pooled in equimolar ratios prior to sequencing using the Illumina NovaSeq 6000 (Illumina, CA, USA). Paired-end 102 bp reads were generated using either a NovaSeq 6000 S1 reagent kit v1.5 (200 cycles ...
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bioRxiv - Immunology 2024Quote: ... Paired-end 102 bp reads were generated using either a NovaSeq 6000 S1 reagent kit v1.5 (200 cycles) (Illumina, CA, USA), SP reagent kit v1.5 (200 cycles ...
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bioRxiv - Genomics 2024Quote: ... Sequencing of the flowcell is performed on the Illumina NovaSeq sequencer using NovaSeq XP V1.5 reagent kits (Illumina, San Diego, CA), S4 flowcell ...
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bioRxiv - Bioengineering 2024Quote: The final 10X single cell GEX library and CSP library were sequenced on one lane in an Illumina NovaSeq X Plus 10B Flowcell (Illumina, CA) as paired reads with 28 cycles for read 1 ...
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bioRxiv - Molecular Biology 2024Quote: ... the two pools were combined in equal molarity and diluted as required according to the NexteraXT protocol (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2024Quote: ... The PCR product library was quantitated and subjected to sequencing on an Illumina MiSeq sequencer (Illumina, San Diego, CA 92122 USA). HLA alleles and genotypes were called using the Omixon HLA Explore (version 2.0.0 ...
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bioRxiv - Plant Biology 2024Quote: ... the genomes of P161 and the parental −0.2 kb pVIN3_U_I::GUS lines were sequenced and compared by illumina Hiseq4000 platform (Illumina, San Diego, CA, USA) to find mutant-specific SNPs in P161 using LabGenomics services.
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bioRxiv - Microbiology 2024Quote: ... Purified 16S rRNA gene sequences were analyzed using a MiSeq Reagent Kit v3 and MiSeq system (Illumina, San Diego, CA, USA). Raw 16S rRNA gene sequences were analyzed using QIIME 2 (ver.2021.4 ...
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bioRxiv - Immunology 2024Quote: ... 75 base pair Next Generation Sequencing was done on a P2 flow cell using the NextSeq 2000 (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were constructed from rRNA gene products according to the “16S Metagenomic Sequencing Library Preparation” protocol (Illumina, San Diego, CA) and sequenced on an Illumina MiSeq platform in 2 × 300 bp ...
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bioRxiv - Microbiology 2024Quote: ... and strand-specific transcriptome sequencing (RNA-Seq) libraries were constructed using the KAPA RNA HyperPrep kit (Illumina, San Diego, CA, USA). Sequencing was carried out on an Illumina NextSeq 500 instrument at the BPF Next-Gen Sequencing Core Facility at Harvard Medical School ...
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bioRxiv - Microbiology 2024Quote: ... Libraries for all samples were prepared using the Nextera™ DNA Flex Library Prep Kit (Illumina Inc., San Diego, CA, USA), and the subsequent shotgun sequencing was executed on a NovaSeq 6000 system (Illumina Inc. ...
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bioRxiv - Microbiology 2024Quote: Pooled single-cell libraries were sequenced across two lanes of an S2 flow cell on a NovaSeq6000 (Illumina, San Diego, CA) with 50 bp paired-end reads at a target sequencing depth of 50,000 reads per cell ...
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bioRxiv - Cancer Biology 2024Quote: ... Uniquely indexed Illumina libraries generated by both methods were pooled and submitted for Illumina sequencing following the manufacture’s protocols (Illumina, Hayward CA.).
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bioRxiv - Genomics 2024Quote: ... The normalized libraries were sequenced as paired end 100bp reactions targeting 30 million reads/sample on the Illumina NovaSeq 6000 (Illumina, CA). The raw FASTQ files were processed through an in-house bioinformatics pipeline including adapter trimming by TrimGalore (v0.6.10 ...
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bioRxiv - Molecular Biology 2024Quote: ... All samples were submitted to the TruSeq total RNA library construction for microbe with Ribo-zero kit previously to be sequenced using the NovaSeq 6000 (Illumina, CA) platform at Macrogen.
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bioRxiv - Microbiology 2024Quote: ... The PCR product library was quantitated and subjected to sequencing on an Illumina MiSeq sequencer (Illumina, San Diego, CA 92122 USA). HLA alleles and genotypes were called using the Omixon HLA Explore (version 2.0.0 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The amplicons were combined in equal amounts and subjected to sequencing using the Illumina PE250 platform (Illumina, San Diego, CA, USA) following standard procedures provided by Majorbio Bio-Pharm Technology Co. ...
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bioRxiv - Developmental Biology 2024Quote: Sample libraries were prepared for Illumina sequencing by denaturing and diluting the libraries per manufacturer’s protocol (Illumina, San Diego, CA, USA). All samples were pooled into one sequencing pool with biased pooling based on variable cell numbers per sample ...
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bioRxiv - Cell Biology 2024Quote: ... and strand-specific RNA-seq libraries were generated using the TruSeq Stranded Total RNA preparation kits (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions before deep sequencing.
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were prepared from 1 ng amplicon DNA by using the Nextera XT library prep kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Genetics 2024Quote: ... Paired-end 150 bp sequencing was performed on an Illumina NovaSeq 6000 using the S4 XP workflow (Illumina, San Diego, CA). Raw FASTQ data were filtered and trimmed using the fastp tool (--length_required 20 ...
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bioRxiv - Genetics 2024Quote: ... Sequence libraries were generated using the manufacturer’s protocol and sequenced using the NovaSeq X Plus platform (Illumina, San Diego, CA, USA).
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bioRxiv - Developmental Biology 2024Quote: Sample libraries were prepared for Illumina sequencing by denaturing and diluting the libraries per manufacturer’s protocol (Illumina, San Diego, CA, USA). All samples were pooled into one sequencing pool ...
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bioRxiv - Immunology 2021Quote: ... Libraries were diluted to 2 nM and paired-end sequencing was performed on a HiSeq 2500 sequencer (Illumina). Stimulation libraries were diluted to 3nM and paired-end sequencing was performed on a NovaSeq 6000 (Illumina).
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bioRxiv - Developmental Biology 2021Quote: ... to determine library size and quantification before paired-end (2 × 41 bp) sequencing on a NextSeq 500 (Illumina) platform ...
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bioRxiv - Developmental Biology 2021Quote: ... Adapters were trimmed and low quality sequences removed using trimmomatic and the requisite Illumina adapter sequences (trimmomatic v0.38; PE -threads 2 ILLUMINACLIP:Illumina_TrueSeq_Adapters_PE.fa:2:30:10 HEADCROP:1 MINLEN:31) ...
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bioRxiv - Genomics 2022Quote: Paired-end DNA sequencing (2×151 bp) of the libraries was performed on the NovaSeq 6000 sequencer (Illumina) using the NovaSeq S4 Reagent Kit ...
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bioRxiv - Genomics 2020Quote: ... on Illumina’s official website (ftp://webdata2:[email protected]/downloads/productfiles/humanomniexpress-24/v1-2/infinium-ommexpress-24-v1-2-mamfest-file-csv.zip) and converted it to a VCF format using Illumina’s GTCtoVCF tool (github.com/Illumina/GTCtoVCF).
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bioRxiv - Genomics 2020Quote: ... Paired-end 2×100 bp RNA-sequencing (Illumina TruSeq RNA Library Prep Kit, Illumina HiSeq2000 and Illumina HiSeq4000) was performed ...
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bioRxiv - Genomics 2020Quote: ... The library preparation and strand-specific paired-end sequencing (2 × 150 bp) on a HiSeq 4000 platform (Illumina) was performed by Novogene Co. ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were then multiplexed and submitted to the sequencing platform (Illumina MiSeq, pair end 2 x 250 bp). Reads with less than 36 bp were discarded and adaptor sequences were removed by Macrogen Inc.
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bioRxiv - Cancer Biology 2020Quote: ... the library was performed pair-end 2×100bp high-throughput sequencing using HiSeq 2500 and Nova-seq (Illumina).
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bioRxiv - Microbiology 2020Quote: ... lLibraries were diluted to 2 nM in 10 mM of TE and samples were sequenced with MiSeq (Illumina) using a paired-end approach ...
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bioRxiv - Plant Biology 2020Quote: ... An initial sequencing run took place on a MiSeq 2 × 300bp run (v3) (Illumina, San Diego, California, USA) at the Field Museum of Natural History ...