Labshake search
Citations for Illumina :
251 - 300 of 1035 citations for Small Airway Epithelial Cell since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2021Quote: ... we combined 3 μl of each sample (approx 2.24 ng) with a small quantity of a Nextera™ tagment DNA enzyme (Illumina catalogue #15027865). To decrease costs ...
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bioRxiv - Neuroscience 2021Quote: ... 1 μg of high-quality RNA for each sample was used for library preparation according to the Illumina TruSeq small RNA library protocol (Illumina Inc., CA). Briefly ...
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bioRxiv - Genomics 2020Quote: Total RNA obtained from plasma was desiccated to a volume of 2.5μl for library preparation with the TruSeq Small RNA Library Prep kit (Illumina, Inc., San Diego, CA) following manufacturer’s instructions ...
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bioRxiv - Neuroscience 2021Quote: The method used to amplify RNA was adapted from Abruzzi et al (Abruzzi et al., 2015) and was performed using TruSeq® Small RNA Library Prep kit (Illumina, USA) and following the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2019Quote: ... RNA fragments were converted to library using NEBNext® Small RNA Library kit (ref#E7330S, New England Biolabs, UK or equivalent from Illumina, USA) following the manufacturer’s instructions ...
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bioRxiv - Genomics 2019Quote: ... Sequence libraries were prepared by the Joint Genome Institute following standard the TruSeq Small RNA library preparation protocol (Illumina, San Diego, CA). Samples were sequenced on an Illumina HiSeq 2500 (Illumina ...
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bioRxiv - Genetics 2020Quote: ... One sequencing experiment (Experiment 1) was performed according to the manufacturer’s directions for the TruSeq Small RNA Sample Preparation Kit (Illumina, RS-200-0012). The protocol was adapted to incorporate a 2S blocking DNA oligo for removal of prevalent Drosophila small ribosomal RNA from the sequencing library [67] ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were constructed from 800 ng total RNA (NEBNext Multiplex Small RNA library prep set for Illumina, New England Biolabs, NEB-E7560S) and the small RNA fraction was sequenced on the NextSeq 500 System (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: ... mRNA and sRNA libraries were constructed by Illumina trueseq stranded mRNA library preparation kit (Cat. No. 20020594) and TruSeq small RNA sample preparation guide (Illumina, San Diego, CA, United States) as per the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2023Quote: ... libraries were constructed from 1000 ng total RNA (NEBNext Multiplex Small RNA library prep set for Illumina, NEB-E7560S, New England Biolabs) and the small RNA fraction sequenced (NextSeq 500/550 High Output Kit v2.5 75 Cycles ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Libraries were made according to the manufacturer’s directions for the TruSeq Small RNA Library Prep Kit (Illumina, Cat. No. RS-200-0012). Resulting libraries were size selected for 145-160bp fragments using Novex 6% TBE gels (Invitrogen ...
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bioRxiv - Microbiology 2020Quote: ... total RNA was sent to Beijing Genomics Institute for library prep with the TruSeq small RNA sample preparation kit (Illumina, San Diego, California) and sequencing by 50 bp single end sequencing with the BGISEQ-500 platform ...
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bioRxiv - Genomics 2022Quote: ... WG and Small RNA libraries were prepared using the Nextera DNA Library Preparation Kit for paired end reads (Illumina, San Diego CA, USA) and the NEBNext Small RNA Library Prep Set (New England Biolabs ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA-seq libraries were prepared from rRNA-free RNA using a strand-specific library preparation protocol (a customised version of Illumina TrueSeq Small RNA) [18] and sequenced on an Illumina HiSeq instrument (126-nt paired-end reads).
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bioRxiv - Neuroscience 2024Quote: ... Library preparation and small RNA sequencing of the PVH and ARC samples was performed as described previously (40) using a TruSeq® Small RNA Library Preparation kit (Illumina, Cambridge, UK). Libraries were sequenced using a HiSeq 4,000 platform ...
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bioRxiv - Cancer Biology 2021Quote: ... MiRNA NGS libraries were then prepared using TruSeq Small RNA Library protocol and sequences using HiSeq 2500 High Throughput Sequencer (all from Illumina, San Diego, California, USA).
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bioRxiv - Evolutionary Biology 2020Quote: ... library preparation was performed using the Illumina TruSeq small RNA kit and cDNA was sequenced on an Illumina NextSeq platform (50bp; Illumina, San Diego, CA, USA). Adapter sequences were trimmed with cutadapt (v2.3 ...
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bioRxiv - Genetics 2022Quote: ... Indexed libraries prepared from small RNA were normalized and all 24 libraries were pooled and split between two lanes of a MiSeq (Illumina, Inc., San Diego, CA) for 50 base-pair single read sequencing.
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bioRxiv - Genetics 2022Quote: ... Retinal cDNA libraries were created by the Iowa Institute of Human Genetics Genomics Division using the TruSeq Stranded mRNA Library Prep Kit and the TruSeq Small RNA Library Prep Kit (Illumina, Inc., San Diego, CA). Indexed libraries prepared from mRNA were normalized and pooled into three groups (corresponding to three biological replicates ...
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bioRxiv - Genomics 2020Quote: Small RNA libraries were prepared starting from 5 µL DNase treated and spike-in supplemented RNA eluate using a TruSeq Small RNA Library Prep Kit (Illumina, San Diego, CA, USA) according to the manufacturer’s protocol with two minor modifications(1) ...
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bioRxiv - Molecular Biology 2022Quote: ... miRNA libraries were prepared from the isolated EV RNA and a water control using the TruSeq Small RNA Library Preparation Kit (RS-200-0012, Illumina, San Diego, CA, USA) using the manufacturer instructions with the modification of performing the adaptor ligation in the presence of 15% polyethylene glycol in order to reduce bias by driving the ligation reactions towards completion as determined by the Extracellular RNA Communication Consortium (46) ...
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bioRxiv - Plant Biology 2023Quote: ... 1 μg total RNA was used for preparation of cDNA libraries with the TruSeq Small RNA Library Preparation Kit (Illumina, San Diego, CA, USA). Libraries were sequenced as 50 bp paired-end reads on an Illumina Genome Analyzer ...
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bioRxiv - Molecular Biology 2021Quote: ... performed libraries of all samples corresponding to DNA-associated RNA molecules and small RNA high-throughput sequencing (high-throughput sequencing on Illumina Hiseq 2500 or Illumina MiSeq). Totally ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were constructed from 300 ng (liver) or 200 ng (hypothalamus) total RNA (NEBNext Multiplex Small RNA library prep set for Illumina, New England Biolabs, NEB-E7560S) and the small RNA fraction was sequenced on the NextSeq 500 System (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... Triplicates were pooled for a target total cell number of 60,000 in 50uL to load less than 20uL into the 10X controller or perform TDE1-based tagmentation reactions on small volumes (Illumina Tagment DNA TDE1 Enzyme and Buffer Kit). The 10X Genomics Chromium Platform was used to generate a targeted 5,000 single cell Gel Bead-In-Emulsions (GEMs ...
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bioRxiv - Developmental Biology 2022Quote: ... SP flow cell (Illumina).
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bioRxiv - Microbiology 2019Quote: ... BV2 cells were then single cell cloned and G3BP1 was sequenced by Illumina HiSeq ...
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bioRxiv - Microbiology 2019Quote: ... BV-2 cells were then single cell cloned and G3BP1 was sequenced by Illumina HiSeq ...
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bioRxiv - Cell Biology 2023Quote: ... performed on 24 cells/cell line using a NextSeq 500 (Illumina, San Diego, CA). Data analysis was performed as described previously69 ...
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bioRxiv - Cancer Biology 2021Quote: ... or S4 flow cell (Illumina).
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bioRxiv - Molecular Biology 2021Quote: ... 300 cycles flow cell (Illumina), with the following parameters ...
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bioRxiv - Cancer Biology 2023Quote: ... or S4 flow cell (Illumina). The average number of read pairs per normal was 614 million and the average number of read pairs per tumor was 1.3 billion.
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bioRxiv - Cancer Biology 2021Quote: ... Single cell derived cDNA libraries were sequenced on NovaSeq S4 cell sequencer (Illumina, San Diego, CA). Cellranger (10x Genomics ...
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bioRxiv - Cancer Biology 2021Quote: ... cells were tagmented with TDE1 (Illumina) for 30 min at 37°C ...
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bioRxiv - Synthetic Biology 2019Quote: ... A MiSeq nano flow cell (Illumina) was clustered with a 4pM library comprised of 90% PhiX and 10% PCR-prepared library ...
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bioRxiv - Genetics 2020Quote: ... 100 cycles flow cell (Illumina Inc.). Amplified fragmented cDNA of 300 bp in size were sequenced in single-end mode with a read length of 100 bp ...
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bioRxiv - Cancer Biology 2021Quote: ... 2 × 150 bp flow cells (Illumina).
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bioRxiv - Cell Biology 2020Quote: ... loaded on a flow cell (Illumina) and sequenced on a NextSeq 500 platform (Illumina ...
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bioRxiv - Cell Biology 2020Quote: ... loaded on a flow cell (Illumina) and sequenced on a HiSeq 4000 platform (Illumina ...
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Human CCR6+ Th cells show both an extended stable gradient of Th17 activity and imprinted plasticitybioRxiv - Immunology 2023Quote: ... and analyzed using Cell Ranger (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... 150 cycles flow cells (Illumina, 20024907). Library preparations of one sample per genotype were run on a single flow cell ...
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bioRxiv - Cell Biology 2021Quote: ... Cells were submitted for 10x library preparation for 3’ single cell sequencing on a NovaSeq 6000 (Illumina) at the Cancer Research UK Cambridge Institute ...
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bioRxiv - Genomics 2021Quote: ... cell line DNA mixes and patients’ libraries were sequenced using a single NovaSeq SP flow cell (Illumina). 10% PhiX was used to ensure sufficient library complexity.
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bioRxiv - Cancer Biology 2022Quote: ... 2500-5000 cells were sequenced at a depth of 50000-100000 reads per cell on a NovaSeq (Illumina). Preprocessing of the data was performed using CellRanger (10x Genomics) ...
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bioRxiv - Molecular Biology 2023Quote: Raw count data of 2700 PBMCs (PBMCs from a health human donor, single cell immune profiling dataset by Cell Ranger 1.1.0 on Illumina NextSeq 500 with ∼69,000 reads per cell ...
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bioRxiv - Cancer Biology 2023Quote: We generated RNA-seq data from the H1299 non-small cell lung cancer cell line with 108,321,106 reads (TrueSeq RNA v2 100 bp paired-end library and Illumina HiSeq2500 machine from Illumina ...
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bioRxiv - Cell Biology 2023Quote: ... Cells were sequenced at a target read depth of 75,000 reads/cell using a HiSeq 4000 sequencer (Illumina). Single-cell counts were generated from unaligned reads by sequence alignment and de-multiplexing using Cell Ranger from 10x Genomics ...
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bioRxiv - Cell Biology 2020Quote: ... Cell sheets transcriptomes were sequenced by Illumina NextSeq®500 Wide Genome Sequencing system (Illumina ...
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bioRxiv - Microbiology 2021Quote: ... sequenced in a MiSeq flow cell (Illumina) for 250 cycles from one end of the fragment and analyzed with Casava 1.8.
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bioRxiv - Molecular Biology 2021Quote: ... High output 150 cycles flow cell (Illumina), with the following parameters ...