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Citations for Illumina :
251 - 300 of 492 citations for Mouse IgG1 Isotype Control Antibody 15H6 since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2020Quote: ... Transcript abundance in samples from infected WT and Nsp65−/− mice matched for viral titer as well as those from PBS-inoculated controls were determined by mRNA sequencing using a HiSeq 2000 instrument (Illumina). Three samples of RNA for each genotype per time point were subjected to paired-end RNA sequencing ...
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bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15 nM with addition of 15% Phix control v3 (Illumina, FC-11-2003). The Illumina Mi-Seq post-run processing uses the barcoded indices to split all sequences by sample and generate FASTQ files ...
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bioRxiv - Microbiology 2020Quote: ... pooled with 1% denatured PhiX DNA (sequencing control) and sequenced in a MiSeq platform (2× 251 cycles paired-end run; Illumina). New PCR reactions using combinations of the primers described above were carried out to cover regions with low coverage for each sample ...
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bioRxiv - Synthetic Biology 2019Quote: ... and a 10%-20% PhiX was spiked in as a control (PhiX is a genomic DNA sample provided by Illumina).
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bioRxiv - Genomics 2019Quote: ... The adapters were trimmed while sequencing by internal software Illumina MiSeq Control v.2.5.0.5 (Illumina, Inc., San Diego, CA, USA).
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bioRxiv - Genomics 2019Quote: ... Each sample library was uniquely barcoded and quantified by PCR using a PhiX Control v3 (Illumina, Cat #FC-110-3001) standard curve ...
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bioRxiv - Microbiology 2019Quote: ... universal bacterial 16S rRNA genes were PCR amplified using 926F and 1392wR primers and then sequenced on an Illumina MiSeq using 30% PhiX Control v3 (Illumina) and a MiSeq Reagent Kit v3 (600 cycles ...
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bioRxiv - Microbiology 2019Quote: ... which was denatured and run on the MiSeq sequencer at a final concentration of 5 pM alongside a 5 pM PhiX control (Illumina). Raw reads generated by MiSeq were error-corrected and filtered using DADA2 through QIIME2 (https://qiime2.org).38 Filtered reads were clustered de novo into Operational Taxonomic Units (OTUs ...
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bioRxiv - Genomics 2019Quote: ... The libraries were combined with20pM PhiX control and sequenced on the Illumina Miseq™ benchtop sequencer (Illumina, San Diego, CA) at the URMC Genomic Core Facilities ...
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bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) previously described by Shaukat et al ...
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bioRxiv - Genomics 2021Quote: ... Libraries were pooled and sequenced single-end for 75 cycles on one high-output flow cell of an Illumina NextSeq with 5% PhiX control (Illumina) added to provide sequence diversity ...
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bioRxiv - Microbiology 2021Quote: ... the pooled library was diluted to 9 pM and spiked with 15% of 9-pM PhiX prepared from PhiX Control Kit v3 (Illumina). The pooled library was then loaded on the MiSeq sequencer (Illumina ...
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bioRxiv - Cell Biology 2021Quote: ... Libraries that passed quality control were diluted to 2nM DNA content using sterile water and then sequenced on the NextSeq500 (Illumina) at a final concentration of 12pM ...
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bioRxiv - Cell Biology 2021Quote: ... and a 4 nM library was prepared for sequencing with a 50% spike in of PhiX Control DNA and the MiSeq Reagent Kit v2 (all from Illumina). Libraries were sequenced in 250 bp paired-end mode on an Illumina MiSeq Benchtop Sequencer ...
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Axon-secreted chemokine-like Orion is a signal for astrocyte infiltration during neuronal remodelingbioRxiv - Neuroscience 2020Quote: ... Genomic DNA was extracted from 30 adult females (mutant and control) and directly sequenced on a HiSeq2000 next-generation sequencing platform (Illumina). Bioinformatics analysis for read alignment and variant investigation was carried out through the 72 kb selected by duplication mapping (see above ...
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bioRxiv - Microbiology 2021Quote: ... a PhiX spike-in of 2.5-5% was added to the pools (PhiX Sequencing Control v3; Illumina # FC-110-3001). Samples were run on the Illumina NextSeq 500 ...
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bioRxiv - Genetics 2019Quote: ... RNA libraries were prepared in batches of 24-48 samples with approximately equal numbers of cases and controls with TruSeq Stranded Total RNA LT Library preparation kits with Ribo-Zero Gold (Illumina) according to manufacturer’s protocol ...
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bioRxiv - Microbiology 2022Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) described by Chaudhry et al ...
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bioRxiv - Microbiology 2022Quote: ... a PhiX spike-in of 2.5–5% was added to the pools (PhiX sequencing control v3; Illumina FC-110-3001). Samples were run on the Illumina NovaSeq 6000 platform (single-read 1 ×85 cycles and 6 × i7 index cycles).
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bioRxiv - Cancer Biology 2022Quote: ... Final quality control by qPCR was performed by the sequencing provider before paired-end 150 nt sequencing on a NovaSeq6000 S4 (Illumina). The sequencing results exceeded 312Gbp ...
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bioRxiv - Developmental Biology 2022Quote: ... Illumina sequencing libraries were prepared from the PCR-amplified cDNA from mutant lungs and controls using the Nextra DNA library prep kit (Illumina). Libraries were sequenced on a NovaSeq 6000 S Prime flowcell (Illumina ...
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bioRxiv - Genomics 2020Quote: ... Wild-type cultured aortic ECs were used to generate the immunoprecipitated and input control libraries using TruSeq DNA Sample Prep Kit v2 (Illumina) following manufacturer’s direction ...
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bioRxiv - Immunology 2019Quote: ... Final pooled libraries were spiked with 10% PhiX control DNA to increase sequence complexity and sequenced (75bp paired-end) on HiSeq 4000 sequencer (Illumina).
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bioRxiv - Cancer Biology 2022Quote: ... performed the library preparation for WGS of parental and resistant cells of cell lines #3 and #9 as well as a control tail samples corresponding to line #3 with the TruSeq DNA PCR-free Kit (Illumina) and the 150 bp paired-end sequencing on a HiSeq X (Illumina).
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bioRxiv - Evolutionary Biology 2019Quote: ... oligonucleotides from Exiqon were used at 10 μM to enhance specificity and sensitivity of the sequencing and PhiX Control v3 sequencing library from Illumina was used to promote quality.
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bioRxiv - Genetics 2019Quote: Libraries for three edited samples and three wild type controls were processed following TruSeq RNA library prep kit v2 protocol (Illumina). RNA-Seq reads were aligned to GRCh38 ...
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bioRxiv - Genomics 2020Quote: ... and pooled in equal concentrations prior to MiSeq v3 sequencing with 15% phiX control spike-in (Illumina FC-110-3001).
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bioRxiv - Microbiology 2021Quote: ... and 12 of the highest scoring samples (eight LRS and four controls) were sent to Otago Genomics Facility for sequencing using the Truseq Total RNA Library Preparation Protocol (Illumina). Host ribosomal RNA (rRNA ...
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bioRxiv - Microbiology 2021Quote: ... The pooled SynCom amplicon libraries were spiked with 25% PhiX control DNA and paired-end sequenced on an Illumina MiniSeq instrument with the mid–output flow cell (Illumina). NatCom libraries and a sample of the SynCom starting inoculum were sequenced on a MiSeq platform with 300 cycles MiSeq v3 paired-end sequencing at the Lausanne Genomic Technologies Facility ...
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bioRxiv - Genetics 2021Quote: ... The bone and reference captured library pools were diluted to 1 pM with a 5% spike-in of PhiX Control V3 (Illumina) for sequencing on a NextSeq 550 (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... Barcoded libraries of ten samples (4 treated, 4 untreated and two controls) were equimolarly pooled and sequenced on MiSeq (Illumina) using MiSeq v3 150 reagent kit (MS-102-3001 ...
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bioRxiv - Genetics 2020Quote: ... Only CNVs with a minor allele frequency (MAF) < 0.01 in controls and overlapping ten or more CNV platform calling probes (Affymetrix Array 6.0 and Illumina Human660W-Quad) were considered for downstream analysis ...
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bioRxiv - Genomics 2019Quote: ... single-end mode) at 12 pM loading concentration with 10% PhiX spike-in (PhiX Control V3 [Illumina FC-110-3001]) following the manufacturer’s instructions.
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bioRxiv - Genomics 2019Quote: ... single-end mode) at 1.8 pM loading concentration with 2.5% PhiX spike-in (PhiX Control V3 [Illumina FC-110-3001]) following the manufacturer’s instructions.
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bioRxiv - Genomics 2022Quote: ... Image analyses and base calling were performed using the HiSeq Control Software (HCS) and Real-Time Analysis (RTA) software (Illumina).
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bioRxiv - Microbiology 2022Quote: ... After the quality control pass libraries were constructed in alignment with the 16S metagenomic library preparation protocol for bacteria and archaea from Illumina Inc ...
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bioRxiv - Neuroscience 2022Quote: ... Each pool was sequenced on the Illumina NextSeq 500 after the addition of 5% PhiX sequencing control library (FC-110-3002; Illumina) using the following settings ...
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bioRxiv - Molecular Biology 2022Quote: The RNA from the lysates and elutions of three HOW(S)-HA pull-downs and one nanos-GAL4 parental control pull-down was prepared using the Ribo-Zero rRNA Removal Kit (Illumina) followed by the TruSeq Stranded Total RNA Library Prep (Illumina) ...
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bioRxiv - Genomics 2022Quote: ... Illumina) following the Illumina recommended denaturation and loading recommendations which included a 1% PhiX spike in (PhiX Control v3 Illumina). Data was uploaded to Basespace (www.basespace.illumina.com ...
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bioRxiv - Microbiology 2023Quote: ... a PhiX spike-in of 2.5–5% was added to the pools (PhiX sequencing control v3; Illumina FC-110- 3001). Samples were run on the Illumina NovaSeq 6000 platform (single-read 1 ×85 cycles and 6 × i7 index cycles).
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bioRxiv - Genomics 2023Quote: ... The PhiX Control library was spiked in the sequencing sample at 10% (v/v) (Illumina, cat. no. FC-110-3001).
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bioRxiv - Genomics 2023Quote: ... We sequenced WGBS libraries on an Illumina HiSeq4000 instrument using 150 bp paired-end indexed reads and 25% of non-indexed PhiX library control (Illumina). We indicate coverage and average GpG depth in Table S2 ...
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bioRxiv - Cell Biology 2022Quote: Libraries from primary cardiac macrophages and total myocardium as well as Schlafenlnc-deficient and control cell lines were generated using the TruSeq Stranded RNA Kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genetics 2023Quote: ... For this we took control individuals from 569 individuals of the FrEx database who have genotyping data (Illumina OmniExpressExome array). Positions corresponding to this array were extracted from the 346 case individuals and we then phased (SHAPEIT4 ...
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bioRxiv - Biochemistry 2023Quote: ... using 100 bp paired-end reads at a depth of ∼30 million reads/sample and concurrently run with the PhiX quality control library (Illumina).
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bioRxiv - Genomics 2023Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument with 1.45 pM input and 1% PhiX control library spiked in (Illumina, USA) targeting 30-40 Million reads pairs per sample.
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bioRxiv - Neuroscience 2023Quote: ... Libraries were transferred to the research core unit genomics (RCUG) of Hannover Medical School for quality control via Bioanalyzer and analysis by Illumina sequencing on flow cells with 15 million clusters.
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bioRxiv - Neuroscience 2023Quote: ... The cDNA samples that passed quality control were used to generate sequencing libraries using the Nextera XT DNA Library Preparation Kit (Illumina), following the user guide ...
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bioRxiv - Microbiology 2023Quote: ... All sequencing runs were performed with a spike-in of 1% PhiX control library V3 (Illumina, Cat. FC-110-3001). The sequencing mean library size was 134,629,540.5 reads [range ...
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bioRxiv - Microbiology 2023Quote: ... and any reads that aligned to the phiX genome (if present, almost certainly as a control in Illumina sequencing runs). We also disabled quality-based truncation of reads ...