Labshake search
Citations for Illumina :
2851 - 2900 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2024Quote: ... the library construction and RNA sequencing (PE150) on Illumina NovaSeq™ 6000 platforms (Illumina, San Diego, CA, USA) were performed by Novogene Genomics Service (Novogene ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced on NextSeq550 (Illumina; RRID ...
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bioRxiv - Plant Biology 2024Quote: ... The libraries were constructed using TruSeq Stranded mRNA LT Sample Prep Kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2024Quote: ... and pooled equimolar to 2 nM for single-read sequencing on the HiSeq4000 (Illumina) with settings 51-8-8 ...
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bioRxiv - Microbiology 2024Quote: ... flanked by Illumina standard adapter sequences ...
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bioRxiv - Neuroscience 2024Quote: ... Library construction and sequencing were carried out at the Dresden Concept Genome Center (DcGC) using the HiSeq 2000 Next Generation Sequencer (Illumina, Inc., USA). Sequenced data was processed with the Space Ranger (10X Genomics ...
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bioRxiv - Microbiology 2024Quote: ... Quantified libraries were then pooled and sequenced using the Illumina NovaSeq 6000 platform (Illumina Inc., San Diego, CA, USA) according to the effective library concentration and the required data amount ...
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bioRxiv - Genomics 2024Quote: ... Six pooled libraries were then loaded at 4nM and sequenced on a NovaSeq SP flow cell (Illumina) with 28 bases for read1 ...
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bioRxiv - Developmental Biology 2024Quote: ... Samples were demultiplexed using bcl2fastq Conversion Software (Illumina). Adaptor trimmed FASTQ paired- end reads were aligned using STAR (v.2.6.1a ...
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bioRxiv - Cell Biology 2024Quote: ... Illumina sequencing (Illumina HiSeq), and analyses were performed by Novogene Bioinformatics Technology Co. ...
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bioRxiv - Developmental Biology 2024Quote: ... and samples with an RNA Integrity Number (RIN) >8 were used to generate RNA sequencing libraries using the Illumina® Stranded mRNA Prep kit (Illumina).
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bioRxiv - Neuroscience 2024Quote: ... Data files were quantified in GenomeStudio Version 2010.2 (Illumina). All samples passed Illumina’s sample dependent and independent quality control metrics ...
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bioRxiv - Neuroscience 2024Quote: ... Raw sequence data (.bcl files) generated from Illumina HiSeq was converted into fastq files and de-multiplexed using Illumina’s bcl2fastq 2.17 software ...
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bioRxiv - Neuroscience 2024Quote: ... Sequencing was done on a Nextseq 75 cycles high output kit (Illumina; paired end sequencing with gene read from one side of the library and the barcode read from the other side ...
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bioRxiv - Neuroscience 2024Quote: ... These libraries were subjected to paired end sequencing on the NovaSeq 6000 system (Illumina). Demultiplexed FASTQ files were aligned to the GRCm39 Mus musculus reference genome using Cell Ranger 6.1.2 with the include-introns flag selected ...
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bioRxiv - Neuroscience 2024Quote: ... and Illumina Nextera XT (Illumina, San Diego, CA, USA) library was used for sequencing library preparation ...
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bioRxiv - Neuroscience 2024Quote: ... Then the libraries were sequenced at the paired-end 150 bp using HiSeq X Ten (Illumina).
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bioRxiv - Neuroscience 2024Quote: ... The cDNA libraries were sequenced using the HiSeq 4000 platform (Illumina) to achieve an average depth of 50,000 reads per cell and 2,500 genes per cell ...
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bioRxiv - Neuroscience 2024Quote: ... Single nuclei were isolated from frozen brain tissue using iodixanol-based density gradient centrifugation and submitted to UCLA Technology Center for Genomics and Bioinformatics for library preparation (via Chromium Single Cell 3’ v3 kit from 10x Genomics) and sequencing (via NovaSeq 6000 S2 platform from Illumina). Cell Ranger (10x Genomics ...
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bioRxiv - Neuroscience 2024Quote: ... The sequencing libraries were pooled and sequenced to generate minimum of 220 M 50 paired-end reads on NovaSeq6000 (Illumina). Reads were aligned to mouse mm10 genome reference using STAR aligner (v2.4.0) ...
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bioRxiv - Neuroscience 2024Quote: Total RNA was employed for library preparation using the TruSeq RNA Library Prep Kit v2 (Illumina, USA), following the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2024Quote: ... Multiplexed libraries were directly loaded onto a HiSeq2000 (Illumina) with a 50 bp single-read configuration ...
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bioRxiv - Neuroscience 2024Quote: ... and sequenced on an Illumina MiniSeq using the MiniSeq Mid Output Kit with standard sequencing primers (Illumina #FC-420-1002 ...
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bioRxiv - Neuroscience 2024Quote: ... BeadChips were then washed and stained as per Illumina protocol and scanned on the iScan (Illumina). Data files were quantified in GenomeStudio Version 2010.2 (Illumina) ...
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bioRxiv - Neuroscience 2024Quote: ... 3.5ug cDNA was biotin labeled (Nugen Illumina) 1.5ug of cDNA was hybridized to the Illumina Mouse WG-6 V2.0 BeadChip containing 45821 probes ...
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bioRxiv - Neuroscience 2024Quote: ... Genotypes were determined with the Illumina Infinium Omni2.5M-8 array (Illumina, San Diego, CA, USA). The PLINK toolset (http://pngu.mgh.harvard.edu/purcell/plink/ ...
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bioRxiv - Neuroscience 2024Quote: ... with P3 200 cycle reagents (Illumina catalog # 20040560), to a depth of ∼40,000 reads/cell for gene expression libraries and 5,000 reads/cell for CRISPR guide-capture libraries.
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bioRxiv - Neuroscience 2024Quote: ... Single-cell RNA libraries were pooled and paired-end-sequenced on the Illumina NovaSeq 6000 platform (Illumina, CA, USA), using a S1 flow cell.
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bioRxiv - Neuroscience 2024Quote: Single-cell sequencing reads from the Perturb-seq experiment were demultiplexed using DRAGEN 4.2 (Illumina). Reads were then aligned to the human genome GRChg38 using CellRanger v7.0.1 ...
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bioRxiv - Neuroscience 2024Quote: ... (2017 PMID: 29155775) using Nextera XT Index kit (Illumina-15055293). Extracted DNA concentration was measured by 2200 Tapestation (Agilent Technologies) ...
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bioRxiv - Neuroscience 2024Quote: ... using the TruSeq Stranded mRNA HT Kit (Illumina) according to the manufacturer’s instructions.
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bioRxiv - Neuroscience 2024Quote: ... cDNA libraries were prepared from the purified RNA using the TruSeq Stranded Total RNA LT library preparation kit (Illumina) following the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2024Quote: ... Samples were tagmented and indexed using a NexteraXT DNA Library Preparation kit (Illumina Cat#FC-131-1096) with NexteraXT Index Kit V2 Set A (Illumina Cat#FC-131-2001 ...
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bioRxiv - Neuroscience 2024Quote: ... with NexteraXT Index Kit V2 Set A (Illumina Cat#FC-131-2001) according to manufacturer’s instructions except for decreases in volumes of all reagents ...
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bioRxiv - Neuroscience 2024Quote: ... 50 ng of the pool was input into a library using TruSeq Nano DNA kit (Illumina, 20015964) as per the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2024Quote: ... containing approximately 40,000 nuclei were re-suspended in the transposition mix (25μL 2x TD Buffer (Illumina Cat no. FC-121-1030), 2.5μL Tn5 Transposes (Illumina Cat no ...
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bioRxiv - Neuroscience 2024Quote: ... and samples were sequenced (2x101bp, 40 million reads/sample) using a Nova-Seq S4 (Illumina) at the UPMC Genome Center (Pittsburgh ...
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bioRxiv - Neuroscience 2024Quote: ... 2.5μL Tn5 Transposes (Illumina Cat no. FC-121-1030) and 22.5μL nuclease free water ...
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bioRxiv - Molecular Biology 2024Quote: ... Bulk sequencing of every sample was performed using the NovaSeq 6000 sequencing system (Illumina). Sequencing resulted in > 20 million read pairs of 150bp paired- end reads per sample.
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bioRxiv - Molecular Biology 2024Quote: ... and library preparation performed using the TruSeq Stranded mRNA Library Prep kit (Illumina). Small RNA (Zamudio et al ...
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bioRxiv - Molecular Biology 2024Quote: ... following the qPCR Quantification Protocol Guide (KAPA Library Quantification kits for Illumina Sequencing Platform), and qualified using the TapeStation High Sensitivity D1000 ScreenTape (Agilent Technologies) ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were prepared using the TruSeq stranded mRNA library (Illumina, Zürich, Switzerland, #20020595) assay and sequenced on an illumina NovaSeq 6000 system at the Functional Genomics Centre of Zurich (FGCZ) ...
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bioRxiv - Neuroscience 2024Quote: ... Library prep was performed using Nextera Flex (Illumina, San Diego, CA, USA) and samples were sequenced (2x101bp ...
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bioRxiv - Neuroscience 2024Quote: ... sequencing was performed on a NovaSeq instrument (Illumina, San Diego, CA, USA). Paired-end reads 2 x 150 bp sequencing runs were performed with an average of 30 million reads per sample ...
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bioRxiv - Neuroscience 2024Quote: ... The libraries were qualified using the Agilent 2100 bioanalyzer from Agilent and then sequenced using the NovaSeq 6000 system (Illumina). The sequencing data quality was assessed using Q30 ...
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bioRxiv - Neuroscience 2024Quote: ... was performed at 21 to 41 million reads/sample in single-end mode with 100 nt read length on the NextSeq 2000 platform (Illumina). Demultiplexed FASTQ files were generated with bcl2fastq2 v2.20.0.422 or bcl-convert v4.0.3 (Illumina) ...
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bioRxiv - Neuroscience 2024Quote: ... Demultiplexed FASTQ files were generated with bcl2fastq2 v2.20.0.422 or bcl-convert v4.0.3 (Illumina). Sequencing data are available at NCBI GEO (http://www.ncbi.nlm.nih.gov/geo) ...
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bioRxiv - Neuroscience 2024Quote: ... DNA libraries suitable for sequencing were prepared from 300-500 ng of total RNA with oligo-dT capture beads for poly-A-mRNA enrichment using the TruSeq Stranded mRNA Library Preparation Kit (Illumina) according to manufacturer’s instructions (1/2 volume) ...
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bioRxiv - Molecular Biology 2024Quote: ... The indexed libraries were further sequenced by Macrogen (Seoul, Republic of Korea) using the NovaSeq platform (Illumina) with 100 bp paired-end reads ...
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bioRxiv - Molecular Biology 2024Quote: ... Pooled libraries were run on a NextSeq 550 (Illumina Inc., San Diego, CA). De-multiplexing and trimming of adapter and barcode sequences were performed on BaseSpace (Illumina Inc. ...