Labshake search
Citations for Illumina :
1701 - 1750 of 2244 citations for 8 Benzyloxy 5 R 2 bromo 1 hydroxyethyl 1H quinolinone since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2020Quote: ... Quantification of libraries and sequencing (rapid run, paired-end sequencing, 2 × 100 cycles, on-board clustering) using the Illumina HiSeq2500 device (Illumina, San Diego, California, USA) were as described previously 44.
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bioRxiv - Microbiology 2020Quote: ... The resulting sequencing libraries were provided to the Cornell University Biotechnology Resource Center for paired-end Illumina MiSeq sequencing (2 × 250 bp) (Illumina, Inc., San Diego, CA). A 20 pM concentration of phiX spike-in at 10-20 % [v/v] was added to 16S and rpoB gene sequencing libraries to improve the quality of the low diversity amplicon libraries.
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bioRxiv - Microbiology 2021Quote: ... Extracted DNA was sent to the University of Illinois Keck Center for Fluidigm sample preparation and paired-end (2 × 250 nt) sequencing on an Illumina NovaSeq (Illumina, San Diego, CA, USA). The 16S rRNA gene fragment was amplified using the primers V3_F357_N ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were then sequenced on a NovaSeq 6000 instrument with a SP flow cell (2 x 250 bp) (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Microbiology 2019Quote: ... normalised and denatured libraries spiked with 2% PhiX Control Library were sequenced using the CSIRO AAHL MiniSeq Sequencing System (Illumina, San Diego, CA, USA) using the High-Output Reagent kit (300-cycles) ...
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bioRxiv - Cancer Biology 2020Quote: ... The libraries were run on the Illumina Next Seq 500 using the High Output 75 cycles kit (2 x 36 cycles, paired end reads, single index; Illumina, San Diego, CA, USA).
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bioRxiv - Immunology 2022Quote: ... Paired-end (2×75) sequencing was performed to an average of 40 million reads per sample on a HiSeq 3000 (Illumina, San Diego, CA, USA).
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bioRxiv - Molecular Biology 2022Quote: ... a final dilution to 4nM was performed and 13 pM of the final denaturated library was loaded onto the Illumina MiSeq® with 10% PhiX using 2 × 300 bp v3 chemistry (Illumina Inc., CA, USA).
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bioRxiv - Cancer Biology 2020Quote: ... The tagmented and multiplexed cDNA libraries were sequenced in Nextseq 500 using Nextseq 500 High Output v.2 kit (75 cycles, Illumina Cat# FC-404-2005) following Macosko et al ...
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bioRxiv - Microbiology 2020Quote: ... Next Generation Sequencing (NGS) was performed on an Illumina MiniSeq® using a Mid Output Kit (2×150-cycles) (Illumina, San Diego, CA, USA) by loading 0.8 pM on the flowcell ...
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bioRxiv - Microbiology 2022Quote: Purified amplicons were pooled in equimolar quantities and paired-end sequenced (2 × 300) according to standard protocols on an Illumina MiSeq platform (Illumina, San Diego, CA, USA) by Majorbio Bio-Pharm Technology Co ...
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bioRxiv - Genomics 2022Quote: ... Barcoded libraries were pooled in equimolar amounts and sequenced as 2×300mer reads on an Illumina MiSeq platform using a MiSeq Reagent Kit v3 (Illumina, Cat#: MS-102-3003). 50% PhiX Control v3 (Illumina ...
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bioRxiv - Microbiology 2019Quote: ... a 20 pM pooled library was subjected to paired-end (2×250 bp) high-throughput sequencing on an Illumina MiSeq platform (Illumina, San Diego, CA, USA) using MiSeq reagent kit v2 ...
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bioRxiv - Immunology 2019Quote: ... All samples were subjected to an indexed PE sequencing run of 2×51 cycles on an Illumina HiSeq 2000 (Illumina, San Diego, CA, USA) (3-4 samples/lane) ...
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bioRxiv - Immunology 2019Quote: ... The V4 variable region of the 16S rRNA gene was amplified using universal bacterial primers(Klindworth et al., 2013) which were uniquely barcoded for each sample (Illumina Nextera Indexes Version 2). The amplicons were purified ...
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bioRxiv - Microbiology 2019Quote: ... All samples were subjected to an indexed paired-end sequencing run of 2×51 cycles on an Illumina HiSeq 2000 system (Illumina, San Diego, CA, USA) (16 samples/lane) ...
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bioRxiv - Pathology 2020Quote: The V3-V4 hypervariable regions of the 16S_rDNA were amplified by two steps PCR using v1 primers (Vaiomer) and sequenced using MiSeq Reagent Kit v3 (2×300 bp Paired-End Reads, Illumina, San Diego, CA, USA) as previously described [24] ...
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bioRxiv - Microbiology 2021Quote: Paired-end libraries were constructed with 0.2 ng/μl of purified DNA using the Nextera XT DNA Library Prep Kit as recommended by the manufacturer (Illumina, San Diego, CA, USA) and were quantified using Qubit fluorometer (ThermoFisher Scientific ...
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bioRxiv - Microbiology 2021Quote: ... following the manufacturer’s instructions and Whole Genome Sequencing was performed using Illumina Miseq platform with a 2 x 250 paired-end run after Nextera XT library preparation (Illumina Inc., San Diego, CA).
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bioRxiv - Microbiology 2021Quote: ... Library preparations and sequencing were performed at the Research Resource Centre at the University of Illinois with pair end (2 x 300 bp) MiSeq platform (Illumina, San Diego, CA, USA). Due to low concentrations of ribosomes in the dry soil collected during the summer of 2017 ...
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bioRxiv - Microbiology 2021Quote: ... High-throughput amplicon sequencing covering the V4-V5 region of the 16S rRNA gene was performed on an Illumina Miseq 2 × 300 paired-end platform (Illumina, San Diego, CA USA) using the universal primers 515F (GTGYCAGCMGCCGCGGTAA ...
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bioRxiv - Evolutionary Biology 2020Quote: ... we used 2 μg total RNA for library preparation following the protocol in the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA, USA). The samples were sequenced by single-end reads (75 bp ...
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bioRxiv - Genetics 2021Quote: ... The thirty-seven sequencing libraries were created by reverse-transcription from 2 µg of RNA from each sample using the TruSeq Stranded mRNA Library Prep kit (Illumina, San Diego, CA, USA). Index adapters were added to identify sequences for each sample in the final data ...
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bioRxiv - Immunology 2020Quote: ... All 11 samples were subjected to an indexed paired-end sequencing run of 2×100bp on an Illumina Novaseq 6000 system (Illumina, San Diego, CA, USA).
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bioRxiv - Molecular Biology 2019Quote: ... the libraries were sequenced on a single MiSeq run using an Illumina MiSeq Reagent Kit v2 for 2 × 150 bp PE (Illumina, San Diego, CA, USA). All sequencing reads obtained in the present study were deposited in the DNA Data Bank of Japan (DDBJ ...
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bioRxiv - Genomics 2021Quote: ... and 2 × 150 bp reads were produced on an Illumina NovaSeq 6000 instrument using the NovaSeq S2 reagent kit (Illumina, San Diego, California, USA). An average of 57,521,215 reads were generated for each of the 4 samples ...
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bioRxiv - Microbiology 2021Quote: ... Equimolar normalization of each pool and sequencing was performed at the BYU DNA Sequencing center on a partial 2 × 250 lane (v2) of a HiSeq 2500 (Illumina, Inc., San Diego, CA). Laser complexity was assured by including at least 10% of each lane with shotgun sequencing libraries for other bacterial genomes ...
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bioRxiv - Evolutionary Biology 2020Quote: ... lactis MG1363 and of the genomes of the bacteriophages studied here were determined using the Illumina MiSeq platform with 2 x 150-bp paired-end sequencing (Illumina, San Diego, CA, USA). Nucleotide sequences were trimmed using Trimmomatic (21 ...
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bioRxiv - Molecular Biology 2020Quote: ... 13 pM library was loaded on the Illumina MiSeq® with 10% PhiX using a 2 × 300 bp V3 chemistry (Illumina Inc., CA, USA).
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bioRxiv - Genomics 2021Quote: ... We performed the cfMeDIP-seq experiment as previously described.2 Samples underwent sequencing (Princess Margaret Genomics Centre, Toronto, ON, Canada) on a NovaSeq 6000 (Illumina, San Diego, CA, USA), paired-end 2×100 bp ...
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bioRxiv - Microbiology 2021Quote: ... the amplicons were purified and sequenced on a MiSeq flow cell using Reagent Kit v3 and 2×300 pair-end reads (Illumina Inc., San Diego, USA) according to the manufacturer’s instructions at the Göttingen Genomics Laboratory (G2L ...
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bioRxiv - Microbiology 2020Quote: ... Illumina MiSeq sequencing was performed at the Genome Institute of Singapore according to the MiSeq reagent kit v2 (2 × 250 bp) preparation guide (Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2022Quote: ... and 2 x 300 bp paired-end sequence reads with mean coverage of 100x were generated on Miseq platform (Illumina, San Diego, CA, USA). De novo assembly was performed with SPAdes v3.9.0 using k-mers of 101 ...
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bioRxiv - Microbiology 2022Quote: ... Sequence reads were obtained from the Illumina NovaSeq platform based on 2 × 250 bp cycles and the NovaSeq 6000 SP Reagent Kit (500 cycles, Illumina, San Diego CA, USA). Further analysis was performed using the QIIME 2 standard pipeline (Version 2020.11)45.
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bioRxiv - Microbiology 2022Quote: ... Extracted DNA was sent to the University of Illinois Keck Center for paired-end (2□×□250 bp) sequencing on an Illumina NovaSeq (Illumina, San Diego, CA, USA). The 16S rRNA gene fragment was amplified using the primers V3_F357_N ...
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bioRxiv - Microbiology 2022Quote: ... 16S rRNA genes were PCR-amplified using primers 341f and 785r [29] and sequenced on the Illumina Miseq platform (Miseq Reagent Kit v3, 2×300 bp; Illumina, San Diego, CA, USA).
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bioRxiv - Physiology 2022Quote: ... Sequencing was performed on the NextSeq 500 with the High Output Reagent Cartridge v2 150 cycles (75bp x 2) (Illumina, San Diego, CA, USA). Linux Ubuntu operating system version 14.04 LTS was used for analyses ...
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bioRxiv - Microbiology 2022Quote: ... Shotgun metagenomic sequencing paired-end libraries were constructed and sequenced as 2×150 bp using the Illumina NovaSeq platform (Illumina Inc, San Diego, CA) at the Edmund Mach Foundation (San Michele all’Adige ...
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bioRxiv - Neuroscience 2023Quote: ... for 16p11.2 del/+ mice were prepared using the Illumina TruSeq Stranded Total RNA with Ribo-Zero gold sample preparation kit (Illumina, Inc., San Diego, CA). Pooled libraries were sequenced on Illumina NovaSeq 6000 sequencers with 100-bp Paired-End chemistry (Illumina) ...
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bioRxiv - Molecular Biology 2022Quote: ... terrestris was performed using paired-end (PE) 2×150 bp on Illumina HiSeq platform according to house build protocol (Illumina, San Diego, California, USA) (Crawford et al ...
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bioRxiv - Zoology 2024Quote: ... the samples and negative controls were pooled and subjected to sequencing on the NextSeq 2000 platform (2 × 100 cycles) (Illumina, San Diego, CA, USA).
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bioRxiv - Immunology 2024Quote: ... The libraries were then pooled at 5nM and sequenced on an Illumina NextSeq 2000 instrument at a 600pM input and 2% PhiX spike in using a P3 100 cycle flow cell (Illumina, San Diego, CA, USA) resulting in 36000-58000 reads per cell.
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bioRxiv - Evolutionary Biology 2024Quote: ... The libraries were then shipped to Admera Health and were paired-end sequenced (2 × 150 bp) on a lane of the NovaSeq X instrument (Illumina, Inc., San Diego, CA).
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bioRxiv - Genetics 2024Quote: ... The library was sequenced with a paired-end (2 × 150 bp) setting using the Illumina X Ten Sequencing System (Illumina, San Diego, CA, USA). The transcriptome data of muscle tissue in 131 hybrid individuals was obtained using DNA nanoball (DNBSEQ-T7 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... NGS libraries were constructed from genomic DNA using the Nextera protocol34 and the Illumina NextSeq 500 platform with 2 x 151 bp runs (Illumina, San Diego, CA, USA). We additionally sequenced with PacBio long-read sequencing on an RSII instrument (Pacific Biosciences ...
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bioRxiv - Microbiology 2024Quote: ... 16S rRNA and ITS2 amplicon DNA was shipped on dry ice to Michigan State University’s Genomics Core (East Lansing, MI, USA) for library preparation and paired-end sequencing on a MiSeq (2 × 300 bp, Illumina, San Diego, CA, USA). Demultiplexed 16S and ITS2 sequences were processed using the DADA2 pipeline in R version 4.1.3 to construct amplicon sequence variants (Martin 2011 ...
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bioRxiv - Synthetic Biology 2023Quote: ... libraries with insert sizes of 250 bp or greater were sequenced using 2×300 paired-end reads on an Illumina MiSeq using a MiSeq Reagent Kit v3 (Illumina Inc, MS-102-3003). Libraries with insert sizes of less than 250 bp were sequenced using 2×150 paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... Samples were then sequenced in a 2 × 75 bp arrangement with a High Output Flow Cell on an Illumina NextSeq 550 system (Illumina, San Diego, CA, USA) at the LuxGen sequencing platform (Dudelange ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing was carried out using the Illumina technology at the Glasgow Polyomics sequencing facility using a standard flow cell and 600 cycle v3 reagent cartridge for 2 x 300 bp (base pair) reads on an Illumina MiSeq instrument (Illumina Inc., Hayward, California, USA).
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bioRxiv - Microbiology 2023Quote: An equimolar pool of libraries was subjected to Illumina sequencing (2 ✕ 100 bp, paired ends) with a NovaSeq 6000 instrument and an SP flowcell (Illumina, San Diego, California, USA). Sequencing was carried out by the sequencing core facility of the Leibniz Institute on Aging - Fritz Lipmann Institute ...