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Citations for Illumina :
1301 - 1350 of 1661 citations for 2 4 Methyl 5 thiazolyl ethyl decanoate since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Bioengineering 2023Quote: ... The resulting mRNA library was sequenced as 2 x 75 bp paired-end reads on a NextSeq 500 sequencer (Illumina). For 16-weeks and ITGβ1+ / CXCR4+ sorted cells cDNA library was prepared using the whole transcriptome Ovation Solo RNA seq Library Preparation Kit (TECAN ...
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bioRxiv - Microbiology 2023Quote: ... and sequenced as 2 x 150 bp reads on the MiSeq instrument using the MiSeq Reagent Micro kit v2 (Illumina). Raw image files were converted to fastq files using bcl2fastq (v2.20.0.422 ...
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bioRxiv - Microbiology 2023Quote: ... before denaturation of the libraries in preparation for loading into the Illumina V2 cartridge (2×250 bp paired-end reads) and running on an Illumina MiSeq machine (Illumina).
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bioRxiv - Immunology 2023Quote: ... 8 cycles for i7 index and 61 cycles for read 2) with Novaseq S2 flow cells (100 cycles) using Novaseq 6000 sequencer (Illumina) in the Life and Brain Center ...
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bioRxiv - Neuroscience 2023Quote: ... Integrity of cDNA libraries were assessed with a High Sensitivity DNA Kit on a Bioanalyzer 2100 before samples were sent for 2×150bp paired-end sequencing on an Illumina NovaSeq 6000 (Illumina) at the Interdisciplinary Center for Biotechnology Research (ICBR ...
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bioRxiv - Genomics 2023Quote: ... Libraries were prepared using the TruSeq® Stranded Total RNA LT - Ribo-Zero Gold kit (Illumina RS-122-2301/2) and sequenced on a NextSeq device.
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced on the Illumina NextSeq500 platform with paired ends for 2 x 150-base pair reads using a Mid-output cartridge Kit v2.5 (Illumina, 20024905). bcl2fastq software was used to demultiplex and compress bcl files into fastq (gz ...
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bioRxiv - Microbiology 2023Quote: ... The libraries were subjected to short-read sequencing (2 × 300 bp paired-end reads) using the Illumina MiSeq sequencing platform (Illumina) at the Atmosphere and Ocean Research Institute ...
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bioRxiv - Plant Biology 2024Quote: ... Sequencing of the RNA-Seq library was carried out to produce paired-end reads (2 × 100 bp) using the Illumina Novaseq system (Illumina), with sequencing services provided by Macrogen ...
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bioRxiv - Molecular Biology 2024Quote: ... and values ≥7.5 were used for library preparation and paired-end (2 × 100 bp) RNA-sequencing on an Illumina NextSeq 6000 instrument (Illumina). Libraries were prepared using a Kapa RNA HyperPrep kit with ribosomal reduction ...
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bioRxiv - Developmental Biology 2024Quote: ... Custom paired-end sequencing (read 1 = 15 bp; read 2 = 250 bp) was performed using the NovaSeq 6000 instrument (Illumina) by the Genomics Core at Van Andel Institute ...
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bioRxiv - Microbiology 2024Quote: ... Paired-end sequencing (2 × 250 bp) was performed at CINVESTAV Mérida using the MiSeq platform (Illumina, San Diego, CA, USA) with a 500-cycle MiSeq Reagent Nano Kit v ...
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bioRxiv - Evolutionary Biology 2024Quote: ... RNA was fragmented by hydrolysis for 2 minutes at 94° and cDNA synthesis was performed with random hexamers following the TruSeq Stranded RNA kit protocol (Illumina). To achieve strand specificity ...
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bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
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bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
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bioRxiv - Microbiology 2024Quote: ... Amplicon libraries were sequenced by 2 × 250 bp paired-end sequencing on a MiSeq platform (Illumina, San Diego, CA, USA) using MiSeq v2 Reagent NANO Kit ...
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bioRxiv - Immunology 2024Quote: ... Libraries were pooled together and paired-end sequencing was performed on an Illumina MiSeq with a MiSeq Reagent Kit v3 (2 × 300 cycles) cartridge (Illumina). The primers are listed in Supplementary file 9.
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bioRxiv - Evolutionary Biology 2024Quote: ... All qRT-PCR inconclusive samples were sequenced on one run of an Illumina MiSeq instrument at the University of Colorado Boulder Center for Microbial Exploration Sequencing Center using a v2 500 cycle 2 x 250 bp kit (Illumina). Sequencing datasets from six of these passed quality control and are included in this report ...
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bioRxiv - Microbiology 2024Quote: ... The samples were pooled in equimolar concentrations and sequenced (2 x 150 bp, PE) on a Novaseq platform (Illumina, USA). All kits were used as per the manufacturer’s instructions with minor modifications.
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bioRxiv - Neuroscience 2024Quote: ... and samples were sequenced (2×101bp; 40 million reads/sample) using a Nova-Seq S4 (Illumina, San Diego, CA, USA). One sample (female ZT10 ...
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bioRxiv - Molecular Biology 2024Quote: ... cDNA libraries were balanced by shallow iSeq and sequenced with a NovaSeq 6000 System (Illumina, S4, 2 x 100 cycles).
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bioRxiv - Molecular Biology 2024Quote: ... DNA recovered from the sorted droplets was amplified using Ampli-Barcode and NGS-Reverse primers (Supplementary Table 2) to append P5 and P7 sequences subsequently used for molecular indexing using the Nextera Indexing kit (Illumina) as recommended by the supplier ...
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bioRxiv - Evolutionary Biology 2024Quote: All qRT-PCR positive samples were sequenced on the same Illumina MiSeq instrument at the Colorado State University Next Generation Sequencing Facility using v2 500 cycle 2 x 250 bp kits (Illumina). The technical replicate libraries for Lion F collected on October 21st were pooled and sequenced as a test run with a separate project ...
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bioRxiv - Genomics 2024Quote: ... Second tagmentation: 35 nl tagmentation mixture (160 μl recipe: 148-152 μl 2 × TD buffer, 12-8 μl TDE1, Illumina) was dispensed into the selected nanowells of the chip ...
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bioRxiv - Cancer Biology 2024Quote: ... Library preparation was performed by the YCGA followed by sequencing to a depth of 30 million paired-end 150 bp reads (2×150) per sample on NovaSeq (Illumina).
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bioRxiv - Cancer Biology 2024Quote: ... the libraries were sequenced on the NextSeq 500 using a Mid-output 150-cycle Kit in 2×50 configuration to generate 6-8 million read-pairs per sample (Illumina). FastQC were used to examine characteristics of the sequencing libraries ...
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bioRxiv - Bioengineering 2024Quote: ... these barcoded libraries were equally pooled and paired-end sequenced (2 x 150 bp) on the NextSeq 2000 instrument (Illumina). FastQC v0.11.9 was used to evaluate the quality of RNA-Seq reads ...
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing of the pooled samples was performed in paired-end mode (2 x 250 bp) using a MiSeq system (Illumina) according to manufacturer’s guidelines ...
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bioRxiv - Cancer Biology 2024Quote: ... libraries were prepared according to the dUTP protocol91 and paired-end sequencing (2×100bp) was performed on the NovaSeq 6000 or NovaSeq X Plus platforms (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... The resulting 2nM pool was denatured and diluted to 10 pM with 5% PhiX spike-in DNA and sequenced (single read, 51 cycles, high output mode) on 2 lanes of HiSeq 2000 system (Illumina).
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bioRxiv - Evolutionary Biology 2024Quote: ... Next-gen sequencing (2 × 150 bp paired end reads) was performed on a NovaSeq 6000 instrument (Illumina, San Diego, CA). Adapter sequences and poor quality reads were filtered with Trimmomatic v34 (Bolger et al ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Each library was paired-end sequenced (2 ξ 150 bp) on an lllumina NovaSeq platform (Illumina, San Diego, CA, USA).
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bioRxiv - Cell Biology 2024Quote: ... were pooled at a 1:1:1:etc ratio before sequencing on an Illumina NextSeq 500/550 instrument using a version 2 kit (Illumina). Fastq files were generated for each library in Illumina BaseSpace ...
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bioRxiv - Developmental Biology 2024Quote: ... 2 µL amplified cDNA was tagmented in 1X Tagmentation Buffer using 0.8 µL bead-linked transposome (Illumina DNA Prep, (M) Tagmentation ...
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bioRxiv - Plant Biology 2021Quote: ... were randomly pooled (4 samples per pool) and grouped using the TruSeq Paired-End Reads Cluster Kit on the cBot platform (Illumina Inc., San Diego, CA, USA). The cDNA libraries were posteriorly sequenced on the Illumina Genome platform Analyzer IIx with a TruSeq kit with 36 cycles (Illumina ...
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bioRxiv - Neuroscience 2020Quote: ... 50bp RNA-seq of IP fractions and total homogenate from 5 replicates per cell type (20 samples total) was performed on a single lane of a HiSeq 3000 (Illumina, San Diego, California), yielding ∼350M reads ...
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bioRxiv - Neuroscience 2020Quote: ... indexing and amplification of the transposed DNA samples was performed by combining 10 µL of transposed DNA with the following: 5 µL of the Nextera i5 and i7 indexed amplification primers (Nextera Index Kit, Illumina, FC-121-1011), 25 μl of the NEBNext High-Fidelity 2x PCR Master Mix (New England Biolabs ...
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bioRxiv - Neuroscience 2021Quote: ... a forward primer 5′-CTT TCC CTA CAC GAC GCT CTT CCG ATC TAC GGR AGG CAG CAG-3 (28-nt Illumina adapter (in bold) followed the 14 nt broad range bacterial primer 343F ...
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bioRxiv - Evolutionary Biology 2022Quote: ... complete cytb was amplified using two different strategies: in 5 overlapping fragments (302 to 375 bp long) to perform short-read sequencing (Illumina or Ion Torrent), and in a single fragment (1457 bp long ...
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bioRxiv - Cell Biology 2020Quote: ... DNA fragments were end-paired and phosphorylated at the 5’ end and successively adenylated at the 3’ end (following Illumina paired-end protocols), and the libraries ligated to the precapture adaptor were amplified and indexed via PCR ...
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bioRxiv - Genomics 2021Quote: ... RNA-seq libraries were prepared from 500 ng total RNA using the TruSeq stranded mRNA library preparation kit (Illumina Inc, Cat# 20020594/5) including polyA selection ...
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bioRxiv - Microbiology 2021Quote: ... [34] was used to compute alignments with a minimum size of 5 kbp (--min-alignment 5000) considering as reference short-read contigs assembled with Velvet (section Collection of Illumina short-read assemblies) from the same isolate against Unicycler ...
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bioRxiv - Immunology 2020Quote: ... PCR amplification and index incorporation were performed in a 50 μl reaction containing 5 μl of forward and reverse index primers (Illumina Nextera Index Kit), 15 μl NPM ...
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bioRxiv - Genomics 2020Quote: ... Individual cells were sequenced to a mean depth of ~1.5 million 38 bp paired-end reads on an Illumina NextSeq 500 instrument with 75 cycle high output kits (Illumina TG-160-2005).
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bioRxiv - Microbiology 2024Quote: Total RNA of 5 μg was used to construct strand-specific RNA-sequencing libraries using the TruSeq RNA sample preparation Kit from Illumina (San Diego, CA). Briefly ...
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bioRxiv - Genomics 2023Quote: ... about 1.5 ng purified pre-amplified cDNA sample was fragmented in four 20 μl tagmentation mix (10 μl 2x TD buffer, 5 μl Nextera XT (Illumina, FC-131-1096), and 5 μl cDNA sample ...
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bioRxiv - Cell Biology 2024Quote: ... library was generated for 10 plasma exosome samples (n=5, young and old individuals each) using a propriety Illumina Truseq™ Small RNA Preparation kit (Illumina, # RS-930), according to the manufacturers’ guide ...
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bioRxiv - Evolutionary Biology 2024Quote: ... DNA solutions of approximately ≥5 ng μL−1 were subjected to the tagmentation reaction using the Nextera DNA Flex Library Prep Kit (Illumina, San Diego, CA) was used at 1/40 scale of the provided protocol ...
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bioRxiv - Microbiology 2024Quote: ... Amplicon library was mixed with 5% of PhiX and sequenced with four MiSeq reagent kits v3 600 cycles (Illumina, San Diego, California, USA). A blank extraction kit control ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequencing (2× 250 bp) of multiplexed DNA libraries was performed on an Illumina MiSeq platform (Illumina, San Diego, CA).