Labshake search
Citations for Illumina :
1251 - 1300 of 1606 citations for 5 TERT BUTOXYCARBONYLAMINO 2 CHLORO NICOTINIC ACID since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2024Quote: ... RNA was fragmented by hydrolysis for 2 minutes at 94° and cDNA synthesis was performed with random hexamers following the TruSeq Stranded RNA kit protocol (Illumina). To achieve strand specificity ...
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bioRxiv - Microbiology 2024Quote: ... Paired-end sequencing (2 × 250 bp) was performed at CINVESTAV Mérida using the MiSeq platform (Illumina, San Diego, CA, USA) with a 500-cycle MiSeq Reagent Nano Kit v ...
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bioRxiv - Immunology 2024Quote: ... Libraries were pooled together and paired-end sequencing was performed on an Illumina MiSeq with a MiSeq Reagent Kit v3 (2 × 300 cycles) cartridge (Illumina). The primers are listed in Supplementary file 9.
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bioRxiv - Plant Biology 2024Quote: ... Sequencing of the RNA-Seq library was carried out to produce paired-end reads (2 × 100 bp) using the Illumina Novaseq system (Illumina), with sequencing services provided by Macrogen ...
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bioRxiv - Developmental Biology 2024Quote: ... Custom paired-end sequencing (read 1 = 15 bp; read 2 = 250 bp) was performed using the NovaSeq 6000 instrument (Illumina) by the Genomics Core at Van Andel Institute ...
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bioRxiv - Molecular Biology 2024Quote: ... and values ≥7.5 were used for library preparation and paired-end (2 × 100 bp) RNA-sequencing on an Illumina NextSeq 6000 instrument (Illumina). Libraries were prepared using a Kapa RNA HyperPrep kit with ribosomal reduction ...
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bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
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bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
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bioRxiv - Microbiology 2024Quote: ... Amplicon libraries were sequenced by 2 × 250 bp paired-end sequencing on a MiSeq platform (Illumina, San Diego, CA, USA) using MiSeq v2 Reagent NANO Kit ...
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bioRxiv - Genomics 2019Quote: ... the nuclei pellets were resuspended in transposase Master Mix (1.25 μl 10x TD buffer, 5 μl H2O and 6.5 μl of Tn5: Illumina Nextera Kit; FC-121-1031) and incubated for 30 minutes at 37°C ...
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bioRxiv - Neuroscience 2020Quote: ... 50bp RNA-seq of IP fractions and total homogenate from 5 replicates per cell type (20 samples total) was performed on a single lane of a HiSeq 3000 (Illumina, San Diego, California), yielding ∼350M reads ...
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bioRxiv - Neuroscience 2020Quote: ... indexing and amplification of the transposed DNA samples was performed by combining 10 µL of transposed DNA with the following: 5 µL of the Nextera i5 and i7 indexed amplification primers (Nextera Index Kit, Illumina, FC-121-1011), 25 μl of the NEBNext High-Fidelity 2x PCR Master Mix (New England Biolabs ...
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bioRxiv - Neuroscience 2021Quote: ... a forward primer 5′-CTT TCC CTA CAC GAC GCT CTT CCG ATC TAC GGR AGG CAG CAG-3 (28-nt Illumina adapter (in bold) followed the 14 nt broad range bacterial primer 343F ...
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bioRxiv - Evolutionary Biology 2022Quote: ... complete cytb was amplified using two different strategies: in 5 overlapping fragments (302 to 375 bp long) to perform short-read sequencing (Illumina or Ion Torrent), and in a single fragment (1457 bp long ...
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bioRxiv - Cell Biology 2020Quote: ... DNA fragments were end-paired and phosphorylated at the 5’ end and successively adenylated at the 3’ end (following Illumina paired-end protocols), and the libraries ligated to the precapture adaptor were amplified and indexed via PCR ...
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bioRxiv - Molecular Biology 2019Quote: ... 10 TLX1/TLX3 and 5 HOXA) was performed using the TruSeq Stranded Total RNA (w/RiboZero Gold) sample prep kit (Illumina, RS-122-2301), involving depletion of ribosomal (rRNA ...
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bioRxiv - Genomics 2021Quote: ... RNA-seq libraries were prepared from 500 ng total RNA using the TruSeq stranded mRNA library preparation kit (Illumina Inc, Cat# 20020594/5) including polyA selection ...
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bioRxiv - Microbiology 2021Quote: ... [34] was used to compute alignments with a minimum size of 5 kbp (--min-alignment 5000) considering as reference short-read contigs assembled with Velvet (section Collection of Illumina short-read assemblies) from the same isolate against Unicycler ...
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bioRxiv - Immunology 2020Quote: ... PCR amplification and index incorporation were performed in a 50 μl reaction containing 5 μl of forward and reverse index primers (Illumina Nextera Index Kit), 15 μl NPM ...
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bioRxiv - Genomics 2020Quote: ... Individual cells were sequenced to a mean depth of ~1.5 million 38 bp paired-end reads on an Illumina NextSeq 500 instrument with 75 cycle high output kits (Illumina TG-160-2005).
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bioRxiv - Microbiology 2024Quote: Total RNA of 5 μg was used to construct strand-specific RNA-sequencing libraries using the TruSeq RNA sample preparation Kit from Illumina (San Diego, CA). Briefly ...
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bioRxiv - Genomics 2023Quote: ... about 1.5 ng purified pre-amplified cDNA sample was fragmented in four 20 μl tagmentation mix (10 μl 2x TD buffer, 5 μl Nextera XT (Illumina, FC-131-1096), and 5 μl cDNA sample ...
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bioRxiv - Cell Biology 2024Quote: ... library was generated for 10 plasma exosome samples (n=5, young and old individuals each) using a propriety Illumina Truseq™ Small RNA Preparation kit (Illumina, # RS-930), according to the manufacturers’ guide ...
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bioRxiv - Evolutionary Biology 2024Quote: ... DNA solutions of approximately ≥5 ng μL−1 were subjected to the tagmentation reaction using the Nextera DNA Flex Library Prep Kit (Illumina, San Diego, CA) was used at 1/40 scale of the provided protocol ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequencing (2× 250 bp) of multiplexed DNA libraries was performed on an Illumina MiSeq platform (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2020Quote: ... The first set of reads was obtained on an Illumina MiniSeq using a paired-end 2×150 bp approach with a library obtained using Nextera Flex (Illumina, inc.). A second set of reads was obtained on a MinION nanopore sequencer (Oxford Nanopore Technology ...
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bioRxiv - Cell Biology 2020Quote: ... for RNA-seq library preparation (250-300 bp insert cDNA library) and sequencing (2×150 bp paired-end reads on an Illumina Platform).
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bioRxiv - Genomics 2020Quote: ... The purified PCR reactions were pooled together and then sent for paired-end Illumina MiSeq sequencing (Illumina 2 × 250 v2 kit) at the Edinburgh Genomics Facility (University of Edinburgh ...
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bioRxiv - Developmental Biology 2021Quote: ... was used to generate indexed 2×75bp paired-end cDNA libraries for subsequent sequencing on NextSeq 500 sequencing platform (Illumina, Inc.). Library preparation ...
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bioRxiv - Molecular Biology 2021Quote: ... Paired-end sequencing (2×75 cycles) was performed at the Bio-Environnement platform (University of Perpignan, France) on a NextSeq 550 instrument (Illumina, USA).
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bioRxiv - Cell Biology 2022Quote: ... For library preparation an amount of 2 mg of total RNA per sample was processed using Illumina’s TruSeq RNA Sample Prep Kit (Illumina, CA, USA) following the manufacturer’s instruction ...
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bioRxiv - Genomics 2020Quote: ... The 800 bp libraries and part of the three MP libraries were sequenced as 2×160 bp nucleotides on the HiSeq2500 (v4 Illumina chemistry) while the remainder of the MP libraries were also sequenced as 2×150 bp on the HiSeq4000 ...
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bioRxiv - Microbiology 2019Quote: ... DNA samples were library prepared for NGS using the Illumina MiSeq platform (2 x 300 bp; Illumina, San Diego, CA, USA) by Ohio State University Molecular and Cellular Imaging Center.
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bioRxiv - Microbiology 2019Quote: ... The viral DNA was used to generate a 2×100 bp Illumina sequencing library and this was sequenced on a Illumina HiSeq4000 (Illumina, USA) at Macrogen Inc ...
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bioRxiv - Genomics 2019Quote: ... The samples were sequenced using paired-end sequencing was performed generating paired-ended 2 × 150 bp reads using TruSeq SBS kit v3 sequencing chemistry (Illumina Inc.) in one lane of Illumina NovaSeq instrument according to the manufacturer’s instructions ...
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bioRxiv - Bioengineering 2019Quote: ... sequencing adaptors and unique dual barcodes combinations were attached to each library PCR amplicons using the Nextera XT Index Kit primers (index 1 N7XX and index 2 S5XX, Illumina, CA), and the amplicon size and concentration were confirmed using a Bioanalyzer (Agilent ...
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bioRxiv - Genomics 2020Quote: ... Illumina sequencing was performed by the Vienna Biocenter Core Facilities on a HiSeq2500 platform (2×125bp; Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2021Quote: ... The final pool was sequenced on Illumina MiSeq platform 2×300 bp using the MiSeq Reagent Kit V3 (600 cycles PE) cartridge (Illumina, USA).
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bioRxiv - Evolutionary Biology 2020Quote: ... Illumina sequencing was performed by the Vienna Biocenter Core Facilities using the HiSeq2500 platform (2×125bp; Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2021Quote: ... and paired end read sequencing (2 x150bp) was performed using MiSeq platform and reagent kit v2 (Illumina, San Diego, CA, USA). For sequences obtained by HTS a pre-alignment quality check was performed using the FASTQC program v0.11.8 and the Trim Galore script (52 ...
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bioRxiv - Plant Biology 2020Quote: ... Sequencing was performed on an Illumina MiSeq platform at the University of Manchester genomics facility using shotgun 2×250 paired-end sequencing methodology (Nextera DNA Preparation Kit, Illumina, USA). The sample used 0.33 of a flow cell and primer design was optimized for use with Platinum Taq DNA polymerase (Invitrogen ...
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bioRxiv - Microbiology 2021Quote: RNA samples from three biological replicates of BeWo cells infected with WT or xrRNA2’ mutant ZIKVMR766 or mock-infected were subjected to poly(A) RNA enrichment and library preparation using TruSeq 2 Library Preparation Kit (Illumina, USA). Libraries were sequenced on an Illumina NextSeq 500 instrument using NextSeq 500/550 High Output Kit v2.5 ...
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bioRxiv - Microbiology 2019Quote: ... containing 20% phiX DNA was denatured and sequenced (2 × 250 nt) on an Illumina MiSeq instrument (Illumina Inc, San Diego, CA) using a v2 500 cycle kit ...
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bioRxiv - Cell Biology 2020Quote: ... were quantified using qPCR and optimal concentration of the library pool used to generate the clusters on the surface of a flowcell before sequencing on a NextSeq500 instrument (2×51 cycles, single read) according to the manufacturer instructions (Illumina Inc.).
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bioRxiv - Immunology 2022Quote: ... a multiplexed amplicon-based whole-viral-genome approach using the NEBNext® ARTIC SARS-CoV-2 Library Prep Kit (Illumina®) was employed (New England Biolabs ...
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bioRxiv - Microbiology 2021Quote: ... Library preparation of amplified SARS-CoV-2 DNA for sequencing was performed using a Nextera XT library prep kit (Illumina Inc.) following the manufacturer’s protocol ...
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bioRxiv - Microbiology 2021Quote: ... Library preparation of amplified SARS-CoV-2 DNA for sequencing was performed using a Nextera XT library prep kit (Illumina Inc.) following the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2022Quote: ... The pool was then quantified with qPCR and a final pool (2 nM) was made for single-read sequencing on the HiSeq4000 (Illumina Inc). The settings were 51-8-8 ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Nextera XT libraries were generated and sequenced in three different runs on MiSeq 2×300bp paired (Illumina, San Diego, CA, USA), as recommended by the manufacturer ...
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bioRxiv - Microbiology 2022Quote: ... Libraries were normalized to 2 nM and sequenced using the MiSeq Reagent Kit v3 (600-cycle) (Illumina, San Diego, CA, USA) following the 2 x 276 bp paired-end read protocol.