Labshake search
Citations for Illumina :
1151 - 1200 of 1606 citations for 5 TERT BUTOXYCARBONYLAMINO 2 CHLORO NICOTINIC ACID since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2020Quote: ... Amplicon sequencing was performed on an Illumina MiSeq platform using Reagent Kit v2 [2×250 cycles] (Illumina Inc., CA, US). The MiSeq Controller Software Casava 1.8 (Illumina ...
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bioRxiv - Microbiology 2021Quote: ... Samples were sequenced using a MiSeq sequencing system and MiSeq V3 (2 × 300 bp) reagent kits (Illumina, San Diego, CA).
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bioRxiv - Neuroscience 2019Quote: ... Linear amplified aRNA from cell bodies and axon samples (2 biological replicates each) was used to prepare RNASeq libraries using the strand-specific ScriptSeq protocol (Illumina). Paired-end sequencing (2x 150bp ...
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bioRxiv - Neuroscience 2020Quote: ... Sequencing was performed on Illumina HiSeq 4000 paired-end at 2 × 126 bp using the TruSeq SBS kit v4-HS (Illumina).
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bioRxiv - Plant Biology 2021Quote: ... Eighteen libraries differentially indexed using the FastGene Adaptor kit (Nippon Genetics) were multiplexed in one lane and sequenced (2 × 150-bp paired-end reads) on a HiSeq X (Illumina) by GENEWIZ.
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bioRxiv - Genomics 2019Quote: ... (2) six cases prepared with the Nextera Mate-pair Library Construction Kit (hereafter called Nextera, Illumina, San Diego, CA, USA) released by the 1000 Genomes Project 25 were used for comparison.
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bioRxiv - Microbiology 2019Quote: ... and paired-end sequences (2 x 250-bp) were generated on an Illumina MiSeq instrument with a 500-cycle MiSeq Reagent v2 kit (Illumina). Library preparation and sequencing was done at the Genetic Diversity Center Zurich (GDC) ...
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bioRxiv - Neuroscience 2019Quote: ... cells were pooled and sequenced in an Illumina NextSeq500 instrument using 2 × 75 paired end reads on a NextSeq high-output kit (Illumina). After de-multiplexing the raw reads to single-cell datasets ...
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bioRxiv - Cell Biology 2020Quote: ... The pool of libraries was loaded onto one lane of an Illumina HiSeq 4000 flow cell and sequencing was performed in a 2 × 150 bp paired end format using HiSeq 4000 SBS reagents (Illumina) and approximately 312 million acceptable quality reads were achieved ...
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bioRxiv - Physiology 2021Quote: ... were clustered and amplified on cBot using HiSeq 3000/4000 PE Cluster Kit and sequenced (2×75 bp paired-end reads) on HiSeq4000 (Illumina) using HiSeq 3000/4000 PE SBS Kit ...
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bioRxiv - Microbiology 2020Quote: ... The obtained partitions were further processed using the Chromium Single Cell 3’ Reagent Kit (version 2, 10x Genomics) to generate Nextera XT sequencing libraries that were sequenced on a HiSeq3000 (Illumina), using a single flow cell lane for each library.
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bioRxiv - Neuroscience 2021Quote: ... All resulting libraries were pooled to be equimolar and sequenced on 2 lanes of an Illumina Genome Analyzer HiSeq 2500 (Illumina) with a single ended read length of small 50 bp ...
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bioRxiv - Microbiology 2021Quote: ... The raw FASTQ files (2 x 150 bp) generated by an Illumina® NovaSeq 6000 (Illumina®, San Diego, USA) were trimmed to remove Illumina adapter sequences using Cutadapt v1.2.1 32 ...
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bioRxiv - Immunology 2021Quote: ... Sequencing was performed in the Human Immunology Core Facility at the University of Pennsylvania using an Illumina 2× 300-bp paired-end kit (Illumina MiSeq Reagent Kit v3 ...
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bioRxiv - Genomics 2021Quote: ... The multiplexed pool was quantified by qPCR and sequenced (paired-end, 2 x 151 cycles and 10 bp for the index reads) using a NovaSeq 6000 device (Illumina) at 3-fold coverage.
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bioRxiv - Cancer Biology 2021Quote: ... Ribo Zero Gold was then used to deplete ribosomal RNAs (2 reactions were used, and the 50°C step was omitted, Illumina). RNA was then purified using Oligo Clean & Concentration kit ...
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bioRxiv - Cancer Biology 2021Quote: ... The resulting pool was loaded into 200cycle NovaSeq Reagent cartridge for 2×100 sequencing and sequenced on a NovaSeq6000 following the manufacturer’s recommended protocol (Illumina Inc.).
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bioRxiv - Microbiology 2021Quote: ... Paired-end sequencing was performed using a HiSeq 4000 instrument (2 x 150 bp) as recommended by the manufacturer (Illumina). Raw reads were trimmed with Trimmomatic version 0.36 (Bolger et al ...
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bioRxiv - Microbiology 2020Quote: ... Libraries were prepared using the NEB Next Ultra II kit (New England Biotech, Ipswich, MA) and paired-end sequenced (2×150bp) on a NextSeq system (Illumina). Adaptors were removed using cutadapt v1.10 [28] and reads assembled using SPAdes v3.7.1 [29] ...
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Comparative effectiveness of probiotic-based formulations on cecal microbiota modulation in broilersbioRxiv - Microbiology 2019Quote: ... DNA samples were library prepared for NGS using the Illumina MiSeq platform (2 × 300 bp; Illumina, San Diego, CA, USA) by Ohio State University Molecular and Cellular Imaging Center.
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bioRxiv - Immunology 2021Quote: VH libraries from sorted B cells were subjected to NGS on the MiSeq platform with the reagent kit V3 2 × 300 bp paired-end (Illumina), using an input concentration of 16 pM with 5% PhiX ...
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bioRxiv - Molecular Biology 2021Quote: ... The index sequences were defined by the combination of primers with TruSeq HT index 1 (D 7xx) and TruSeq HT index 2 (D 5xx) (Illumina). Index PCR was performed using KAPA HiFi HS ReadyMix (Kapa Biosystems ...
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bioRxiv - Molecular Biology 2021Quote: The amplicons were sequenced on an Illumina MiSeq platform in 2 × 251 bp paired-end mode using MiSeq Reagent Nano Kit v2 500 cycles (Illumina). The sequenced reads were mapped to the human reference genome hg19 using the methylation analysis tool Bismark v0.18.1 (Babraham Bioinformatics)52 ...
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bioRxiv - Microbiology 2021Quote: ... Sequencing of the libraries was performed using a 2×150 paired-end (PE) configuration on an Illumina HiSeq platform according to the manufacturer’s instructions (Illumina, CA); image analysis and base calling were conducted by HiSeq Control Software (HCS ...
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bioRxiv - Microbiology 2021Quote: ... The library pool was then loaded into flow cell of MiSeq Reagent Kit V2 (2 × 150 cycles) and sequenced in a MiSeq platform (Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2021Quote: ... We tested two different amounts of Tagment DNA TDE1 enzyme (1 and 2 μl in a 50 μl reaction volume) (Illumina) per sample ...
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bioRxiv - Genomics 2021Quote: ... The library was prepared using the Chromium Genome Library Kit & Gel Bead Kit and sequenced (2 x 150 bp paired-end) on the NovaSeq 6000 (Illumina NovaSeq 6000 Sequencing System ...
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bioRxiv - Genomics 2021Quote: ... The libraries were sequenced on the S4 300 cycle kit flow (2×151 paired end reads) using the XP workflow as outlined by Illumina.
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bioRxiv - Genomics 2021Quote: Two unamplified 300 bp Illumina libraries were generated and sequenced 2×150 bp on the HiSeq-2500 1TB platform (Illumina).
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bioRxiv - Microbiology 2021Quote: ... The amplicons were sequenced using the Illumina MiSeq 2 × 250 bp platform with a MiSeq Reagent Nano Kit V2 (Illumina).
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bioRxiv - Genomics 2020Quote: ... were quantified using qPCR and optimal concentration of the library pool used to generate the clusters on the surface of a flowcell before 75nt paired-end sequencing on a NextSeq500) instrument (2×75 cycles) according to the manufacturer instructions (Illumina).
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bioRxiv - Microbiology 2022Quote: ... RNA libraries were sequenced using an Illumina NextSeq 550 with the High Output Kit v2.5 -150 Cycles (2 × 75 bp paired-end) (Illumina Inc.).
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bioRxiv - Neuroscience 2022Quote: ... Libraries were sequenced on two NovaSeq 6000 lanes using 300-cycle SP Reagent Kits (2×150 bp paired-end reads; Illumina).
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bioRxiv - Immunology 2022Quote: ... The library was sequenced on the NovaSeq 6000 with pair-end reads (26 bp for read 1 and 91 bp for read 2) (Illumina). Data available at accession number GSE195488.
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bioRxiv - Cancer Biology 2022Quote: ... equal amount of RNA from each sample or cell types were used to generate the library using the TruSeq RNA Sample Prep Kit v.2 (Illumina). Paired-end sequencing was performed using TruSeq 3000 4000 SBS Kit v.3 (Illumina ...
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bioRxiv - Molecular Biology 2022Quote: ... The generated libraries were amplified using the KAPA HiFi Hotstart Ready Mix and Nextera Index Kit 1 (i7) and 2 (i5) primers (Illumina). Amplified libraries were purified using a 0.65x AMPure XP beads (Beckman Coulter ...
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bioRxiv - Evolutionary Biology 2022Quote: ... using a v3 Miseq sequencing kit (300 × 2, MS-102-3003) with 30% PhiX (Illumina, Inc. San Diego, CA, USA) and a starting concentration of 4nM denatured to a final concentration of 8pM.
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bioRxiv - Cell Biology 2022Quote: ... Sequencing was done using 2 lanes of NextSeq 500 High Output v2.5 Kit (75 cycles) (Illumina Inc., catalog number 20024906).
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bioRxiv - Genomics 2022Quote: ... Samples were sequenced with a coverage of 50 M paired end reads (2 x 100 bp) /sample on a NovaSeq (Illumina).
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bioRxiv - Genomics 2022Quote: ... Paired-end library was constructed using the VAHTSTM mRNA-seq V2 Library Prep Kit for Illumina (Vazyme) and sequenced with 2×150 bp chemistry on the Illumina HiSeq NovaSeq 6000 platform (Illumina).
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bioRxiv - Microbiology 2022Quote: ... Paired-end sequencing was accomplished using the Illumina MiSeq Platform (2 x 300 cycles; Illumina Inc., San Diego, CA, USA). Amplicon libraries were constructed according to the protocol from Illumina (16S Metagenomic Sequencing Library Preparation ...
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bioRxiv - Microbiology 2022Quote: ... In the first round of PCR we used primers that align to Illumina Truseq Read 1 primer site located directly upstream of the barcode in the lentiviral backbone and a primer annealing downstream of the barcode containing an overhand with Illumina Truseq Read 2 sequence (see ‘Illumina barcode sequencing 1st round PCR primers’ in the Supplemental Table 1) ...
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bioRxiv - Microbiology 2022Quote: ... Paired-end sequencing was performed at Genome Quebec using the MiSeq PE300 (2 x 300 bp) Platform (Illumina, V3 Kit). A Small Read Archive of this sequencing data is available on GenBank under Accession ...
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bioRxiv - Microbiology 2022Quote: ... Paired-end read sequencing (2 x 50bp) was carried out on a NextSeq500 sequencer (0.5 Flowcell High Output; Illumina Inc.). Raw reads were pre-processed with the sequence-grooming tool cutadapt (Martin ...
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bioRxiv - Zoology 2023Quote: ... quantified by qPCR (Kapa Library quantification kit) and sequenced on a SP lane in paired-end 2 × 150 nt mode on a Novaseq6000 (Illumina) according to the manufacturer’s instructions.
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bioRxiv - Neuroscience 2022Quote: ... using single end 75bp for Read 1 and 8bp for index 1 and 8bp for Index 2 with a high output 75bp kit (20024906, Illumina).
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bioRxiv - Neuroscience 2022Quote: ... The indexed libraries were then subjected to paired-end (2×100 bp) sequencing on the Illumina NovaSeq platform (Illumina, Inc.) by Macrogen Incorporated.
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bioRxiv - Microbiology 2022Quote: ... The 10-pM final library was sequenced on the Illumina MiSeq sequencing platform (2 × 150bp paired-end reads) (Illumina Inc.).
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bioRxiv - Molecular Biology 2022Quote: ... Libraries were sequenced to a depth of 20 million paired-end 2×150bp reads each on the NovaSeq 6000 (Illumina) at University of Colorado Genomics and Microarray Core.
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bioRxiv - Systems Biology 2024Quote: ... according to the Ovation RRBS Methyl-Seq System 1-16 protocol for the first read and the Read 2 primer (Illumina) for the second read ...