Labshake search
Citations for Illumina :
51 - 100 of 667 citations for Red colored Polystyrene Beads 1 um since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2022Quote: ... Ribosomal RNA depletion was done using Ribo-Zero magnetic beads according to manufacturer protocol (Illumina). cDNA library preparation was performed following standard protocols ...
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bioRxiv - Genomics 2020Quote: ... probe level data was obtained from median summarization over background corrected bead level data from Illumina Genome Studio ...
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bioRxiv - Cancer Biology 2021Quote: ... and signal intensity on bead chips were converted to raw data using the iScan platform (Illumina). All the lab experiments were done following the manufacturer’s protocols ...
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bioRxiv - Genomics 2020Quote: ... The beads were suspended in TD buffer from the Nextera kit and transposed with Tn5 (Illumina) at 55°C for exactly 10 minutes ...
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bioRxiv - Plant Biology 2022Quote: ... the beads were washed once in 60 µl RSB (Resuspension buffer) (Illumina, San Diego, CA, USA), and finally resuspended in 50 µl RSB ...
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bioRxiv - Immunology 2024Quote: ... Bead purified libraries were normalized and finally sequenced on the HiSeq 3000/4000 system (Illumina Inc.) with a read setup of SR 1×150 bp ...
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bioRxiv - Immunology 2022Quote: The bead purified library pool was sequenced on the NextSeq2000 system (Illumina Inc. San Diego, USA) with a read setup of PE 2×100 bp ...
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bioRxiv - Neuroscience 2023Quote: ... Transcriptome data were measured with Illumina HumanHT-12 V3 bead chips (Illumina, San Diego, CA, USA). Proteome data were measured by liquid chromatography-mass spectrometry (LC-MS/MS) ...
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bioRxiv - Cancer Biology 2024Quote: ... It combines tagmentation on beads with extension using IDT for Illumina DNA Unique Dual Indexes (Illumina DNA PCR-Free Library Prep ...
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bioRxiv - Plant Biology 2020Quote: ... Purified RPFs and total RNAs were rRNA depleted using the Ribo-Zero Magnetic bead kit (Illumina, USA) by adding 50 μL or 100 μL of magnetic beads per RPF or RNA samples respectively ...
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bioRxiv - Immunology 2022Quote: ... Bead purified libraries were normalized and finally sequenced on the NextSeq550 system (Illumina Inc. San Diego, USA) with a read setup of 1×76 bp ...
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bioRxiv - Systems Biology 2021Quote: Polyadenylated RNA was extracted from 10 ug total RNA per sample using TruSeq RNA purification beads (Illumina) and eluted in 15 uL H2O.
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bioRxiv - Genetics 2021Quote: ... The stained bead chip was imaged using the iScan System (Illuminia) and Genome Studio v2.0 software (Illumina) subsequently used to normalise the raw signal intensity data and perform genotype clustering ...
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bioRxiv - Cancer Biology 2024Quote: ... Amplicons were cleaned with Agencourt AMPure XP beads and sequenced on HiSeq 4000 or NovaSeq 6000 (Illumina) with a custom sequencing primer (Supplementary Table 6) ...
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bioRxiv - Genomics 2021Quote: ... Final libraries were purified using 0.9x Ampure XP beads and sequenced for 150 cycles on NovaSeq 6000 (Illumina). Data was analyzed essentially as described for fitness experiments ...
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The transcription factor reservoir and chromatin landscape in activated plasmacytoid dendritic cellsbioRxiv - Molecular Biology 2021Quote: ... Bead purified libraries were normalized and sequenced on the HiSeq 3000/4000 system (Illumina Inc. San Diego, USA) with a read setup of SR 1×150 bp ...
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bioRxiv - Cell Biology 2022Quote: ... The resulting PCR amplicons were purified using Ampure XP Beads and sequenced using the HiSeq 2500 system (Illumina) to assess changes in abundance of sgRNAs between Ogt fl and Ogt iKO groups ...
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bioRxiv - Immunology 2024Quote: ... Amplicons were cleaned using AMPure beads and input into the Illumina DNA Prep Kit (Illumina, San Diego, CA) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2023Quote: ... Ampure-bead purification and were normalized using an Illumina Nextera XT DNA sample preparation kit (Illumina, CA, USA). Multiplex pools were sequenced using MiSeq Reagent Kit v3.0 (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... The barcoded library was then purified using NEBNext Sample Purification Beads then sequenced using the Novaseq platform (Illumina).
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Mitochondrial Apolipoprotein MIC26 is a metabolic rheostat regulating central cellular fuel pathwaysbioRxiv - Cell Biology 2023Quote: ... Bead purified libraries were normalized and finally sequenced on the NextSeq2000 system (Illumina Inc. San Diego, CA, USA) with a read setup of 1×100 bp ...
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bioRxiv - Genetics 2023Quote: ... scRNA-Seq libraries were constructed using Single Cell 3’ Library and Gel Bead Kit v3.1 (8,000 initial cell capture number) and were subsequently sequenced using a NovaSeq 6000 sequencer (Illumina).
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bioRxiv - Microbiology 2024Quote: ... A Tagmentation Mix was prepared by combining three reagents: TB1 Tagment DNA Buffer (0.5 µl) was mixed with 0.5 µl bead-linked transposomes (BLT) (Illumina) and 4 µl PCR grade water ...
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bioRxiv - Genomics 2021Quote: ... DNAs were eluted from the beads and used for library preparation with the Nextera DNA library preparation kit (Illumina).
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bioRxiv - Cancer Biology 2021Quote: 3′-scRNAseq was completed using Chromium Next GEM single cell 3′ GEM library and Gel bead Kit v3.1 (10x Genomics) and sequenced using a NextSeq 500 (Illumina) at Genomics Birmingham (University of Birmingham) ...
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bioRxiv - Genomics 2022Quote: ... Libraries were generated with the Chromium Single Cell ATAC Library & Gel Bead Kit (1000111) and sequenced using the NextSeq 500/550 High Output Kit v2.5 (Illumina) on an Illumina NextSeq 550 platform ...
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bioRxiv - Physiology 2022Quote: ... with oligo-dT capture beads for poly-A-mRNA enrichment using the TruSeq Stranded mRNA Library Preparation Kit (Illumina) according to manufacturer’s instructions (½ volume) ...
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bioRxiv - Systems Biology 2024Quote: ... were performed using Illumina Human Methylation 450K (hitherto called 450K arrays)30,31 and Cuvertino et al used Infinium Methylation EPIC bead chip (Illumina)58 ...
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bioRxiv - Genomics 2024Quote: ... RNA was purified from 1 μg total RNA using RNA purification beads as part of the Truseq Stranded mRNA kit according to the manufacturer’s protocol (Illumina). 1 ng of poly(A)-enriched RNA was loaded into each qRT-PCR reaction.
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bioRxiv - Developmental Biology 2023Quote: ... Beads were washed with Tagmentation Wash Buffer (10mM Tris, pH 7.5, 5mM MgCl2) and incubated with Tn5 transposes (Illumina Tagment DNA Enzyme and Buffer Small Kit ...
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bioRxiv - Neuroscience 2023Quote: ... A bead ratio of 0.9x was used (20 ul of Sera-Mag Select beads to 22.10 ul library product, as per Illumina protocol), and all samples were eluted in 22 μl of Resuspension Buffer (Illumina) ...
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bioRxiv - Genomics 2023Quote: ... Polyadenylated RNA was captured using oligo(dT) magnetic beads and libraries were synthesized using Stranded mRNA Prep Ligation (Illumina). RNAs were chemically fragmented and synthesis of the first strand of cDNA was made in the presence of actinomycin D ...
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bioRxiv - Developmental Biology 2024Quote: ... Bead-purified libraries were normalised and finally sequenced on the HiSeq 3000/4000 system (Illumina Inc. San Diego, USA).
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bioRxiv - Microbiology 2020Quote: ... Illumina sequencing libraries were generated using ‘on-bead’ tagmentation chemistry with the Nextera DNA Flex Library Prep Kit (Illumina, Inc.) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2021Quote: ... libraries were prepared using a Chromium Single Cell 3’ Library & Gel Bead kit v2 (10x Genomics, PN-120237) and sequenced using a NextSeq 500 (Illumina). The mean number of reads per cell was approximately 25,000 and the median number of genes detected per cell was approximately 2,000.
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bioRxiv - Immunology 2020Quote: ... After equimolar pooling of samples we purified libraries with AMPure XP beads and sequenced on a HiSeq 4000 (75 bp PE reads) or NovaSeq S1 (100 bp PE reads) (both Illumina). A step-by-step guide to our optimised ChIPseq protocol is available at protocols.io.
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bioRxiv - Immunology 2021Quote: ... Chromatin fragments bound to magnetic beads were resuspended in 30 μl Tagmentation mix (14 μl H2O, 15 μl Tagment DNA Buffer [Illumina, order no ...
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bioRxiv - Evolutionary Biology 2021Quote: ... the poly (A) messenger RNA was isolated from the total RNA with oligo (dT) attached magnetic beads (Illumina Inc., USA). Fragmentation was carried out using divalent cations under elevated temperature in Illumina proprietary fragmentation buffer ...
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bioRxiv - Genomics 2020Quote: ... RNA samples were enriched for mRNA using poly-A attached magnetic beads followed by Paired-end RNA-seq library preparation using the TruSeq RNA Sample Prep kit (Illumina). One hundred nucleotides were sequenced using the HiSeq platform (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... Tumor samples were sub-classified into four subgroups using genome-wide DNA methylome analysis (Illumina Methylation EPIC 850K bead arrays) as previously described.17 Normal cerebellum specimens were obtained at autopsy ...
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bioRxiv - Genomics 2020Quote: ... We genotyped 5645 samples on the Illumina HumanCoreExome-12v1.0_B (HumanCore) and 192 samples on the Illumina HumanOmni1-Quad V1.0_B (Omni) bead chip arrays (Illumina, San Diego, CA, USA) at The Centre for Applied Genomics (Hospital for Sick Children ...
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bioRxiv - Microbiology 2021Quote: ... are then subjected to rRNA depletion using RiboZero beads from the TruSeq Stranded Total RNA Library Prep Gold kit (Illumina) and purified using Zymo RNA Clean and Concentrator kit ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were purified using Ampure XP beads and sequenced using MiSeq V2 (150bp x 2) chemistry (Illumina, San Diego, CA). 18S V4+V5 amplification was achieved using the iProof DNA polymerase (Bio-Rad Laboratories ...
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bioRxiv - Cancer Biology 2021Quote: ... RNA was purified from total RNA samples (100-500 ng) with oligo(dT) magnetic beads and sequencing libraries recommended by Illumina. Purified libraries were qualified on an Agilent Technologies 2200 TapeStation using a D1000 ScreenTape assay (cat# 5067-5582 and 5067-5583) ...
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bioRxiv - Physiology 2021Quote: ... Samples were subject to another bead clean up prior to A-tailing and ligation of adapters as per kit instructions (Illumina). Following a third bead clean-up ...
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bioRxiv - Microbiology 2020Quote: ... Samples were multiplexed on a single MiSeq flowcell using Nextera XT barcodes and normalised using the bead-based normalisation kit (Illumina). Sequencing of 41 pooled genomes was performed simultaneously at Makerere University ...
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bioRxiv - Evolutionary Biology 2021Quote: ... RNA integrity was evaluated using an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA 95051 USA. mRNA was isolated using poly T beads, whereafter Illumina libraries were prepared using the NEBNext Ultra II Directional RNA Library Prep Kit ...
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bioRxiv - Physiology 2020Quote: ... single-cell barcoded cDNA libraries were generated with 10X Chromium preparation system using the Chromium Single Cell 3’ Library & Gel Bead Kit v3 and sequenced by Illumina HiSeq ...
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bioRxiv - Immunology 2020Quote: ... Single cell libraries from sorted samples were generated using a UMI-based droplet-partitioning platform with the Chromium single cell 3’ library and gel bead kit v2 and v3 (10X Genomics) and then sequenced using a NovaSeq S2 (Illumina). Technical information relevant to the scRNA-Seq samples is found in Table S3.
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bioRxiv - Genomics 2021Quote: ... The library was prepared using the Chromium Genome Library Kit & Gel Bead Kit and sequenced (2 x 150 bp paired-end) on the NovaSeq 6000 (Illumina NovaSeq 6000 Sequencing System ...