Labshake search
Citations for Illumina :
9101 - 9150 of 9493 citations for Rat Hypoxanthine Phosphoribosyltransferase 1 HPRT1 ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: ... Short-read sequencing data for error correction was generated from the same individual using the TruSeq Nano DNA Low Throughput Library Prep Kit and IDT for Illumina – TruSeq DNA UD Indexes (Illumina, San Diego, CA, USA). Standard protocols were followed to yield a paired library with a 350 bp insert size and 50 bp standard deviation ...
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bioRxiv - Genomics 2022Quote: ... Genomic DNA library was prepared using the Chromium Genome Library Kit v2 (10X Genomics, Pleasanton, CA, USA) and sequenced on the NovaSeq 6000 platform (Illumina, San Diego, CA, USA) to generate paired-end 150 bp reads ...
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bioRxiv - Evolutionary Biology 2022Quote: ... was used for cDNA synthesis and purification using a low-throughput protocol with a TruSeq Stranded RNA LT Kit (Illumina, San Diego, CA, USA). A half-scale reaction of the standard protocol was used for library preparation ...
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bioRxiv - Plant Biology 2022Quote: ... We prepare 12 cDNA libraries (3 individuals □ 2 sampling times (dawn and dusk) □ 2 localities) using the TruSeq RNA-seq library prep kit from Illumina (Illumina, Inc., CA, USA) according to manufacturer’s instructions ...
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bioRxiv - Physiology 2022Quote: ... and used to construct stranded RNA-seq libraries from polyA-selected total liver RNA using an Illumina stranded TruSeq mRNA Prep Kit (Illumina, San Diego, CA, USA). Three pooled RNA samples were prepared for each of the four treatment groups ...
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bioRxiv - Microbiology 2022Quote: ... Purified PCR products were fragmented and tagged with the indexed adaptors using the Nextera DNA XT Sample Preparation Kit (Illumina, San Diego, CA, USA). The sequence library was quantified by using the Quant-iT PicoGreen dsDNA Assay Kit (Invitrogen) ...
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bioRxiv - Microbiology 2022Quote: ... Libraries were pooled and sequenced (single-end 75 bp reads) on Illumina NextSeq 500 using High Output V2 Kit (Illumina, San Diego, CA, USA). Sequencing data were analyzed as described previously (70 ...
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bioRxiv - Microbiology 2022Quote: ... Sequence reads were obtained from the Illumina NovaSeq platform based on 2 × 250 bp cycles and the NovaSeq 6000 SP Reagent Kit (500 cycles, Illumina, San Diego CA, USA). Further analysis was performed using the QIIME 2 standard pipeline (Version 2020.11)45.
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bioRxiv - Microbiology 2022Quote: ... Amplicons of the V3-V4 region of the 16S rRNA gene and the and the ITS1 region and library prep were generated by Herculase II Fusion DNA Polymerase Nextera XT Index Kit V2 (Illumina, San Diego, CA, USA). The products of the library prep were validated by an Agilent Tapestation D1000 (Santa Clara ...
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bioRxiv - Microbiology 2022Quote: ... 16S rRNA genes were PCR-amplified using primers 341f and 785r [29] and sequenced on the Illumina Miseq platform (Miseq Reagent Kit v3, 2×300 bp; Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2022Quote: ... Indexed amplicons were pooled in equimolar amounts and sequenced using Illumina’s v3 600-cycle (paired-end) reagent kit on an Illumina MiSeq benchtop sequencer (Illumina Inc., San Diego, CA, USA) after all DNA extraction blanks and PCR reagent blanks were confirmed for negative amplification.
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bioRxiv - Microbiology 2022Quote: Short read sequencing libraries were prepared using the Illumina DNA Prep kit in combination with IDT® UD Indexes Set A (Illumina, USA, #20018705, #20027213). Between 66.3 ng and 200 ng per sample was used as starting material ...
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bioRxiv - Neuroscience 2022Quote: ... Sequencing libraries were prepared by transposase-assisted tagmentation and enrichment of 3’end of genes using Nextera XT DNA Library Prep Kit (Illumina, San Diego, CA, USA). The libraries were sequenced on the HiSeq2500 for 25 and 75 cycles paired-end reads ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed by the NIDDK Genomics Core facility using a MiSeq system with the single-end 50 bp Sequencing Kit (Illumina, San Diego, CA, USA). Sequence reads were mapped to the reference genome (NC_000913.3 ...
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bioRxiv - Plant Biology 2022Quote: ... Illumina sequencing pair-end libraries with an insert size of 300 bp were prepared using the Nextera DNA Flex Library Prep Kit (Illumina, San Diego, CA, USA). After the libraries were constructed ...
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bioRxiv - Genomics 2022Quote: ... Mixed nucleic acid (DNA and cDNA) from all samples were subjected to library construction using Nextera XT DNA Sample Preparation Kit (Illumina Inc., San Diego, USA) and sequenced on an Illumina MiSeq platform (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... 5 µl of this reaction was used in a subsequent round of amplification using BC amp set 3 primers to add Illumina adapters to the sequences followed by amplification using the Nextera XT DNA Library Preparation Kit (Illumina cat. FC-131-1096) to add 5’ and 3’ indices to the library ...
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bioRxiv - Neuroscience 2023Quote: ... for 16p11.2 del/+ mice were prepared using the Illumina TruSeq Stranded Total RNA with Ribo-Zero gold sample preparation kit (Illumina, Inc., San Diego, CA). Pooled libraries were sequenced on Illumina NovaSeq 6000 sequencers with 100-bp Paired-End chemistry (Illumina) ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were pooled and single end sequenced (1X75) on the Illumina NextSeq 500 using the High output V2 kit (Illumina Inc., San Diego CA). Read data was processed in BaseSpace (basespace.illumina.com) ...
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bioRxiv - Microbiology 2022Quote: ... Whole genome metagenomic libraries were prepared at LLNL using the Illumina DNA Flex library kit (now called Illumina DNA Prep, Illumina Inc., Santa Clara, CA) using 1 ng of sample DNA and 12 cycles of amplification ...
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bioRxiv - Neuroscience 2022Quote: ... Approximately 1 ug of total RNA was then used to prepare small RNA library according to the protocol of TruSeq Small RNA Sample Prep Kits (Illumina, San Diego, CA, USA). Then ...
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bioRxiv - Microbiology 2022Quote: ... multiplexed at 72-96 samples per run in paired-end mode with 325 × 275 cycles using the MiSeq Reagent v3 600-cycle kit (Illumina Inc., San Diego, CA).
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bioRxiv - Bioengineering 2024Quote: Barcoded stranded mRNA-seq libraries were prepared from total RNA (∼200 ng) using the Illumina TruSeq stranded mRNA Sample Preparation v2 Kit (Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2 ...
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bioRxiv - Microbiology 2024Quote: ... The final co-culture RNA-sequencing library (fig. S20B) was deep-sequenced on a NovaSeq 6000 instrument with a 100 cycles S2 Kit (Illumina, San Diego, CA, USA) in paired-end mode (Read 1 ...
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bioRxiv - Neuroscience 2024Quote: Libraries of BMP2-stimulated naïve cortical cultures were prepared from 200 ng total RNA by using the TruSeq Stranded mRNA Library Kit (Cat# 20020595, Illumina, San Diego, CA, USA) and the TruSeq RNA UD Indexes (Cat# 20022371 ...
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bioRxiv - Immunology 2024Quote: ... were prepared in the Fred Hutchinson Cancer Center (FHCC) Genomics Core Facility (Seattle, WA) using the TruSeq RNA Sample Prep Kit v2 (Illumina, San Diego, CA, USA), as previously described (Rose et al. ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Construction of DNA libraries was performed by the Michigan Department of Health and Human Services using the Nextera XT library prep kit (Illumina, San Diego, CA, USA) followed by sequencing on the MiSeq (Illumina ...
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bioRxiv - Immunology 2024Quote: ... transposition reaction was done with 350 rpm mixing and using the transposase from the Illumina Tagment DNA TDE1 Enzyme and Buffer Kit (Illumina, San Diego, CA, USA). Libraries were quantified using KAPA Library Quantification kit (Roche ...
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bioRxiv - Microbiology 2024Quote: ... The resulting lag phase RNA-sequencing library (fig. S21B) was sequenced on a NextSeq 500 instrument with a 150 cycles Mid Output Kit (Illumina, San Diego, CA, USA) in paired-end mode (Read 1 ...
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bioRxiv - Microbiology 2024Quote: ... The extracted DNA was used to construct libraries for metagenomic shotgun sequencing using the Illumina Nextera XT 1⁄4 kit (Illumina, San Diego, CA, United States). Metagenomic shotgun sequencing libraries were sequenced on an Illumina NovaSeq system (Illumina ...
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bioRxiv - Cancer Biology 2024Quote: ... were checked using the Agilent-2100 Bioanalyzer System and subjected to library preparation utilizing the TruSeq stranded total RNA Gold library preparation kit with RiboZero Gold treatment and unique dual indexes according to the manufacturer’s instructions (Illumina Inc., San Diego, CA, USA). The paired-end reads of 150 bp were generated in an S4 flowcell with v1.5 sequencing chemistry on a NovaSeq-6 000 platform (Illumina Inc.) ...
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bioRxiv - Immunology 2024Quote: ... China), using Chromium Single Cell 3’ Reagent Kits v2 (from 10x Genomics, Pleasanton, CA, USA) and NovaSeq 6000 System (Illumina, San Diego, CA, USA) respectively ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were pooled and single-end sequenced (1X75) on the Illumina NextSeq 500 using the High output V2 kit (Illumina Inc., San Diego CA).
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bioRxiv - Evolutionary Biology 2023Quote: ... The libraries for Illumina sequencing were constructed according to standard protocols using the Illumina DNA prep kit and IDT 10 bp UDI indices (Illumina, San Diego, CA, USA) by the sequencing facility at SEQCENTER (PA ...
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bioRxiv - Genomics 2023Quote: ... RNA was extracted from similar pooled-samples (N = 3) using the ZYMO (Irvine, CA, USA) direct-zol miniprep kit (Cat. # R2050) and sequenced using NovaSeq (Illumina, San Diego, CA, USA) paired-end (150 bp ...
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bioRxiv - Developmental Biology 2023Quote: ... ATAC-seq libraries were generated as described previously (Buenrostro, Giresi et al. 2013) using the Nextera XT DNA Library preparation kit (Illumina catalog: FC-131-1024). Sequencing was performed on an Illumina HiSeq 2500 with 30 - 40 million 75bp paired-end reads ...
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bioRxiv - Cell Biology 2023Quote: Libraries were pooled and paired-end sequenced (2X75) on the Illumina NextSeq 500 using the High output V2.5 kit (Illumina Inc., San Diego, CA, USA). Average read count for w1118 and CRTC mutant transcripts was approximately 15.3 million reads per sample ...
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bioRxiv - Evolutionary Biology 2023Quote: ... the HMW DNA was prepared for sequencing using a Chromium Genome Linked Reads Kit (10X Genomics Inc., Pleasanton, CA) and sequenced on a HiSeq 2500 DNA Sequencing Platform (Illumina Inc., San Diego, CA). The linked-read output data were assembled using the Supernova assembler (Weisenfeld et al. ...
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bioRxiv - Genomics 2023Quote: ... Approximately one microgram of RNA from each tissue sample was utilized to prepare libraries using the TruSeq Stranded mRNA Library Preparation Kit with polyA selection (Illumina Inc., San Diego, USA). The libraries were paired-end sequenced in two separate batches ...
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bioRxiv - Bioengineering 2023Quote: ... The PCR products were subjected to sequencing library construction using the TruSeq® DNA PCR-Free Sample Preparation Kit (Illumina, San Diego, CA, USA). The libraries were loaded on a NovaSeq 6000 system (Illumina ...
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bioRxiv - Synthetic Biology 2023Quote: ... libraries with insert sizes of 250 bp or greater were sequenced using 2×300 paired-end reads on an Illumina MiSeq using a MiSeq Reagent Kit v3 (Illumina Inc, MS-102-3003). Libraries with insert sizes of less than 250 bp were sequenced using 2×150 paired-end reads ...
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bioRxiv - Molecular Biology 2022Quote: ... normalised and pooled before 150 paired-end sequencing on an Illumina MiniSeq sequencing system with a Mid Output Kit (Illumina, San Diego, CA, USA).
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bioRxiv - Evolutionary Biology 2023Quote: ... and 0.5ng of each fragment mixed and used to construct barcoded sequencing libraries with the Nextera XT DNA Library Preparation Kit (Illumina, cat. no.FC-131-1096). Libraries were multiplexed and sequences were determined using Miseq 2 × 250 Illumina sequencing.
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bioRxiv - Molecular Biology 2023Quote: ... The RNA sequencing library was generated from 300 ng total RNA using the TruSeq Stranded mRNA Library Prep kit (#20020595, Illumina, San Diego, CA, USA) with oligo-dT beads for capture of poly-A-mRNA according to manufacturer’s protocol ...
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bioRxiv - Microbiology 2023Quote: ... Genomic DNA libraries were prepared for whole genome sequencing using the Tagmentation-based library prep kit according to the manufacturer’s instructions (Illumina Inc, San Diego, CA, USA). Next ...
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bioRxiv - Microbiology 2023Quote: ... The libraries were prepared using Nextera XT DNA Sample Preparation Kit and sequenced on MiSeq or NovaSeq 6000 platform (Illumina, San Diego, CA, USA). Raw reads were quality- and adaptor-trimmed using Trimmomatic v0.39 (Bolger at al. ...
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bioRxiv - Molecular Biology 2023Quote: ... rRNA subtraction was performed to deplete ribosomal RNAs from each sample using the Ribo-Zero rRNA Removal Kit (Gram-Negative Bacteria; Illumina, San Diego, CA, USA), and a TruSeq Kit mRNA Library Prep Kit (Illumina ...
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bioRxiv - Neuroscience 2023Quote: ... The sequencing libraries were generated by Genomescan using the NEBNext Low Input RNA Library Prep Kit from Illumina (New England Biolabs, cat#E6420S/L). In short ...
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bioRxiv - Systems Biology 2022Quote: The sequencing library preparation was done using 200 ng of total RNA input with the TrueSeq RNA Sample Prep Kit v3-Set B (RS-122-2002, Illumina Inc, San Diego, CA) producing a 275 bp fragment including adapters in average size ...
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bioRxiv - Systems Biology 2022Quote: ... single reads and 7 bases index read on an Illumina HiSeq300 instrument using the TruSeq SBS Kit HS-v3 (50-cycle) (FC-401-3002, Illumina Inc, San Diego, CA).