Labshake search
Citations for Illumina :
701 - 750 of 1384 citations for Exodus 2 CCL21 Mouse since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... Paired-end sequencing (2 × 150 or 250 cycles) was performed using the NextSeq 550 or MiSeq system (Illumina).
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bioRxiv - Microbiology 2022Quote: ... and sequenced using 500 cycles on a HiSeq 2500 (2 × 250 bp) system (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... and paired-end sequenced (2 × 300 bp) on a MiSeq sequencer using the MiSeq Reagent kit V3 (Illumina). Geneious was used to trim the sequencing data (using BBduk ...
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bioRxiv - Microbiology 2023Quote: ... The DNA library was paired-end sequenced (2 x 151 bp) on a NovaSeq S4 system (Illumina, USA). A long-read sequencing library was prepared according to the SQK-LSK110 protocol (ONT ...
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bioRxiv - Zoology 2023Quote: ... and subsequently paired-end (2×150 bp) sequenced on a NovaSeq 6000 instrument (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... The 16S rRNA gene amplicons were sequenced using the 2 x 300 bp paired-end MiSeq protocol (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... Samples were then amplified and paired-end sequencing (2 x 41 cycles) was performed on NextSeq 500 (Illumina). See Supplementary Table 2 for sequenced ATAC-seq samples.
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bioRxiv - Genomics 2023Quote: ... and subsequently paired-end (2×150 bp) sequenced on a NovaSeq 6000 instrument (Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2023Quote: ... Samples were multiplexed and sequenced with 2×75 bp pair-end reads on a NextSeq 500 instrument (Illumina).
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bioRxiv - Plant Biology 2023Quote: ... where they were subsequently sequenced on a MiSeq instrument (v3 cell, paired-end 2 × 300 bp; Illumina, USA). The raw sequencing data is available from the European Nucleotide Archive (http://www.ebi.ac.uk/ena ...
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bioRxiv - Genomics 2023Quote: ... using the S2 Reagent Kit v1.5 Paired End 2×50 base (100 cycle) sequencing kit (Illumina cat. #20028316). Sequencing parameters were set for R1 at 28 cycles ...
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bioRxiv - Molecular Biology 2023Quote: ... The pellet was then resuspended in the transposition reaction mix (25 μL 2× TD buffer, 2.5μLTn5 Transposes (Illumina) and 22.5μL nuclease-free water ...
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bioRxiv - Biophysics 2023Quote: ... at the UNMC Sequencing core using miSeq reagent kit v3 (600 cycles) 2 x 300 read length (Illumina). The total number of reads were 1-2 million reads per sample.
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bioRxiv - Cell Biology 2023Quote: ... The supernatants were carefully removed and the pellets were re-suspended in 25 μL of transposase reaction mix (12.5 μL 2×TD buffer, 1.25 μL TN5 transposase (Illumina) and 11.25 μL nuclease-free water) ...
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bioRxiv - Microbiology 2022Quote: ... The quality of paired-end reads obtained from MiSeq sequencing was analyzed by using Qiagen CLC Genomics Workbench 22.0.1 and the Identify ARTIC V3 SARS-CoV-2 Low Frequency and Shared Variants (Illumina) workflow was used in genetic variant analyses ...
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bioRxiv - Microbiology 2023Quote: ... The recovered DNA fragments were sequenced using the MiSeq 500PE v.2 kit (Illumina, San Diego, CA, USA). Short-read sequences from each PCR fragment were assembled using Spades v 3.1(31) ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced at low-pass (2x 50bp paired end) targeting 2 million reads on a NextSeq (Illumina) instrument ...
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bioRxiv - Plant Biology 2023Quote: ... Amplicons were sequenced (2×250 bp) on a NovaSeq 6000 SP flow cell (Illumina, San Diego, CA, USA). Each “batch” of 96 samples (n=6 ...
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bioRxiv - Plant Biology 2024Quote: ... The final pool was run at 750 pM with 2% PhiX control library on a NextSeq 2000 (Illumina) with a P3 300 cycle kit ...
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bioRxiv - Genomics 2023Quote: ... The nuclei pellets were resuspended in 50μl of transposition buffer (25μl of 2× TD buffer, 22.5μl of distilled water, 2.5 μl of Illumina Tn5 transposase) and incubated at 37 °C for 30 min with shaking at 1000 rpm for fragmentation ...
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bioRxiv - Cancer Biology 2024Quote: ... 2 µg of total RNA were depleted for ribosomal RNA using a Ribo-Zero-rRNA removal kit (Illumina), followed by random primed cDNA synthesis ...
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bioRxiv - Microbiology 2024Quote: ... The PCR products were then sent to Biofidal sequencing company for purification and 2×300bp Miseq sequencing (Illumina). A total of 12,836,921 and 14,248,382 reads were obtained from 16S and 18S rDNA respectively and were demultiplexed using the Mothur pipeline (69 ...
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bioRxiv - Cell Biology 2020Quote: ... cDNA libraries were constructed from individual mouse samples and RNA-seq libraries were constructed using the Nextera XT DNA Library Preparation Kit (Illumina). Libraries were sequenced on the Illumina platform ...
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bioRxiv - Developmental Biology 2020Quote: ... Ribosomal RNA was removed from 500ng of input RNA using either Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) from Illumina or NEBNext rRNA Depletion Kit (Human/ Mouse/ Rat) ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA-Seq libraries were made following a standard protocol using Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina) and TruSeq Stranded mRNA Library Prep (Illumina) ...
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bioRxiv - Molecular Biology 2020Quote: ... Sequencing libraries were generated using the TruSeq Stranded Total RNA with Ribo-Zero Human/ Mouse/Rat Low-throughput (LT) kit (Illumina) and run on a NextSeq 500 for paired-end sequencing using the NextSeq 500/550 High Output v2 Kit ...
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bioRxiv - Cell Biology 2022Quote: ... libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human/Mouse/Rat Kit (cat. RS-122-2201/2202, Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: Illumina sequencing libraries of total RNA were prepared using the Illumina TruSeq Stranded Total RNA Human/Mouse/Rat kit (Cat number RS-122-2201) following the protocol provided by Illumina with Ribo-Zero.
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bioRxiv - Systems Biology 2019Quote: ... was measured using an Agilent Bioanalyzer and samples were ribo-depleted using a using a RiboZero Gold (Human/Mouse/Rat) kit (Illumina) to remove rRNAs ...
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bioRxiv - Molecular Biology 2019Quote: ... 1 µg of input RNA was used for rRNA removal with Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat) (Illumina). Libraries were generated with the NEBNext Ultra Directional RNA Library Prep kit for Illumina (NEB ...
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bioRxiv - Cancer Biology 2020Quote: ... Libraries were prepared from 1 μg of total RNA using a TruSeq Stranded Total RNA Kit with Ribo-Zero Human/Mouse/Rat (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2021Quote: ... RNAseq reads were aligned against to Ensembl Mouse genome (NCBIM37) reference sequence assembly and transcript annotation that obtained from Illumina iGenomes (https://support.illumina.com/sequencing/sequencing_software/igenome.html ...
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bioRxiv - Genomics 2022Quote: ... The eluted RNAs were ribodepleted by using the rRNA removal section of a TruSeq Stranded Total RNA Library Prep Human/Mouse/Rat kit (Illumina), with the supernatant from the magnetic-bead separation cleaned-up by using a Zymo RNA Clean & Concentrator kit with 8X ethanol ...
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The RNA-Binding Protein SAM68 regulates cardiomyocyte differentiation by enhancing Gata4 translationbioRxiv - Molecular Biology 2022Quote: ... rRNA depletion and library preparation was done with the TruSeq stranded total RNA Library prer Human/Mouse/Rat (20020596, Illumina). The sequencing was performed using 2×125bp paired-ends reads on a HiSeq 2500 sequencer with HiSeq v4 chemistry ...
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bioRxiv - Biochemistry 2022Quote: ... Raw sequencing reads were aligned to the mouse genome (mm9) and the corresponding GTF file (downloaded from Illumina’s IGenomes site) using TopHat v.2.1.1 with parameters i= 30 ...
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bioRxiv - Cancer Biology 2022Quote: ... Libraries were generated from 1 μg of total RNA using a TruSeq Stranded Total RNA Library Prep Human/Mouse/Rat (48 Samples) (Illumina) per manufacturer’s instructions ...
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bioRxiv - Cell Biology 2022Quote: ... RNA-seq libraries were prepared using the TruSeq Stranded Total RNA LT Sample Prep Kit with Ribo-Zero Human/Mouse/Rat (Illumina). We generated biological triplicate data for 1T47 ...
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bioRxiv - Genomics 2019Quote: ... cDNA libraries were constructed using Illumina TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human/Mouse/Rat Set B (Illumina) to deplete ribosomal RNA according to the manufacturer’s instruction ...
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bioRxiv - Genomics 2019Quote: ... The Agilent 2100 Bioanalyzer was used to assess RNA quality and only high quality RNA (RIN > 8) was further processed for removal of ribosomal RNA with the Ribo-Zero Magnetic Gold Kit (Human/Mouse/Rat; Illumina). Ribosomal-depleted RNA was used as input for library preparation with Illumina TruSeq V2 RNA prep kit and processed according to the manufacturer’s instruction ...
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bioRxiv - Molecular Biology 2020Quote: ... RNA-seq for the mouse heart tissues were performed using next generation high throughput sequencing method (Illumina HiSeq 2000, Illumina). Total RNAs were isolated ...
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bioRxiv - Molecular Biology 2020Quote: ... RNA-seq for the mouse heart tissues were performed using next generation high throughput sequencing method (Illumina HiSeq 2000, Illumina). Total RNAs were isolated ...
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bioRxiv - Molecular Biology 2021Quote: ... 10 μg chromatin-associated RNAs were depleted of ribosomal RNA depletion using Ribo-Zero Magnetic Gold Kit (human/mouse/rat; Illumina), according to the manufacturer’s instruction ...
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bioRxiv - Molecular Biology 2021Quote: ... 10 μg chromatin-associated RNAs were depleted of ribosomal RNA depletion using Ribo-Zero Magnetic Gold Kit (human/mouse/rat; Illumina), according to the manufacturer’s instruction ...
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bioRxiv - Genomics 2021Quote: ... rRNA was removed and total RNA library was prepared with TruSeq Stranded Total RNA Library Prep Human/Mouse/Rat (Illumina) and sequenced by Illumina platform HiSeq2500 Paired-end 125 bp.
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bioRxiv - Physiology 2021Quote: Sodium-bisulfite treated DNA of nine samples (6 dHT vehicle treated and 3 dHT drug treated) was subjected to measure global DNAm by Infinium Mouse methylation BeadChip array (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2021Quote: ... rRNA was depleted using Ribo-Zero™ Magnetic Gold Kit for rRNA depletion (Human/Mouse/Rat) (Epicentre for Illumina #MRZG12324) according to manufacturer’s guidelines ...
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bioRxiv - Genomics 2020Quote: RNA from a subset of human fetal (n = 3) and mouse (n = 8) cortex tissue samples was prepared with TruSeq Stranded mRNA Sample Prep Kit (Illumina) and subjected to 125bp paired-end sequencing using a HiSeq2500 (Illumina) ...
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bioRxiv - Microbiology 2020Quote: ... ribosomal RNA (rRNA) was depleted from the total RNA extracts using the Ribo-Zero Gold (human-mouse-rat) kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Microbiology 2021Quote: ... rRNA was removed using Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat) and Ribo-Zero rRNA Removal Kit (Bacteria) (Illumina). In order to reduce the impact of the host transcriptome on subsequent analysis ...
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bioRxiv - Molecular Biology 2021Quote: ... Sequencing libraries were generated using the TruSeq Stranded Total RNA with Ribo-Zero Human/ Mouse/Rat Low-throughput (LT) kit (Illumina) and run on a NextSeq 500 for paired-end sequencing using the NextSeq 500/550 High Output v2 Kit ...