Labshake search
Citations for Illumina :
6151 - 6200 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... the data obtained from Illumina sequencing was assessed using nf-core-ampliseq (v2.4.0 ...
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bioRxiv - Microbiology 2023Quote: ... and for sequencing MiSeq® ReagentKit v2 (500 cycle) (Illumina, Inc., USA). The maximum length of the resulting sequences was 2 × 250 bp.
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bioRxiv - Microbiology 2023Quote: ... Sequencing was performed using Nextera ® XT IndexKit library preparation reagents (Illumina, Inc., USA) and Agencourt PCR products for purification ...
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bioRxiv - Immunology 2023Quote: ... single-cell RNA-seq libraries were pooled and sequenced on a NovaSeq 6000 instrument using an S1 flow cell (Illumina 20028319).
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bioRxiv - Immunology 2023Quote: ... cDNA libraries prepared by the TruSeq RNA Sample Prep Kit (Illumina) were sequenced using the HiSeq 2000 sequencing system (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... on a shared Illumina NovaSeq 6000 sequencer using a NovaSeq 6000 S4 Reagent Kits v1.5 (200 cycles; Illumina, 20028313). The read set-up was as follows ...
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bioRxiv - Developmental Biology 2023Quote: ... Sequencing was performed on the NovaSeq 6000 Sequencing System (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... Annotations for mm10 were from UCSC and obtained from iGenomes (Illumina). Alignments were collapsed to UMIs using collapse_UMI_bam from Lexogen ...
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bioRxiv - Cancer Biology 2023Quote: ... Pooled libraries were subjected to 100 bp paired-end sequencing according to manufacturer protocol (Illumina NextSeq550). Bcl2fastq2 Conversion Software (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... Triplicates were pooled for a target total cell number of 60,000 in 50uL to load less than 20uL into the 10X controller or perform TDE1-based tagmentation reactions on small volumes (Illumina Tagment DNA TDE1 Enzyme and Buffer Kit). The 10X Genomics Chromium Platform was used to generate a targeted 5,000 single cell Gel Bead-In-Emulsions (GEMs ...
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bioRxiv - Cancer Biology 2023Quote: ... cDNA fragments were ligated to IDT for Illumina TruSeq UD Indexed adapters (Illumina Inc, San Diego CA, USA). Quality and quantity of the finished libraries were assessed using a combination of Agilent DNA High Sensitivity chip (Agilent Technologies ...
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bioRxiv - Developmental Biology 2023Quote: ... Pooled libraries were sequenced on two flowcells of a NextSeq500 instrument (Illumina) in 1×75bp single-end sequencing mode ...
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bioRxiv - Developmental Biology 2023Quote: Single-nucleus multimodal libraries were sequenced using the NovaSeq 6000 instrument (Illumina). Sequencing was performed by the Genomics Division of the Iowa Institute of Human Genetics ...
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bioRxiv - Developmental Biology 2023Quote: ... FASTQ files were generated from base calls with the bcl2fastq software (Illumina). Reads were mapped to the pre-built GRCh38 reference (GRCh38-2020-A-2.0.0 ...
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bioRxiv - Developmental Biology 2023Quote: ... FASTQ files were generated from base calls with the bcl2fastq software (Illumina), and reads were mapped to the pre-built GRCh38 reference (refdata-gex-GRCh38-2020-A ...
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bioRxiv - Developmental Biology 2023Quote: scRNA libraries were pooled and sequenced using the NovaSeq 6000 instrument (Illumina) generating 100-bp paired end reads ...
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bioRxiv - Cancer Biology 2023Quote: ... library preparation was performed using the SENSE mRNA-Seq Library Prep Kit V2 (Lexogen) according to the protocol’s directions and submitted for sequencing (Illumina). Sequenced reads were aligned using RSEM along with Bowtie2 against the human genome (version ...
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bioRxiv - Molecular Biology 2023Quote: Exome sequencing of a sibling pair with generalized OA at multiple joint sites was performed by Illumina HiSeq 2000 technology (Beijing Genome Institute ...
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bioRxiv - Microbiology 2023Quote: The USEARCH pipeline (v.11) [44] was used to process the data obtained from Illumina sequencing ...
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bioRxiv - Cancer Biology 2023Quote: ... The mutational profile of GSCs was assessed using the TruSight Oncology 500 cancer panel (Illumina) and a NovaSeq 6000 instrument ...
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bioRxiv - Microbiology 2023Quote: ... Demultiplexed FASTQ files were generated with bcl2fastq2 v2.20.0.422 (Illumina).
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bioRxiv - Genomics 2023Quote: ... and sequenced on a NovaSeq 6000 (Illumina).
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bioRxiv - Genomics 2023Quote: ... according to manufacturer’s protocol with TruSeq RNA UD Indexes (Illumina 20022371). Sequencing was carried out using Illumina NovaSeq S4 150bp pair-end dual indexed run ...
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bioRxiv - Genomics 2023Quote: ... The final libraries were pooled and sequenced on the NovaSeq 6000 platform (Illumina, San Diego, CA) generating 100-bp ...
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bioRxiv - Microbiology 2023Quote: ... and a DNA fragment containing read1 (Illumina sequencing element), P3 (constitutive promoter for sgRNA expression) ...
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bioRxiv - Microbiology 2023Quote: ... The pooled samples were then sequenced on a NovaSeq6000 (Illumina) with 250 bp paired-end sequencing.
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bioRxiv - Cell Biology 2023Quote: ... Paired-end sequencing was performed with 150bp reads using NextSeq (Illumina). Raw reads were filtered using fastp (0.19.4)15 and mapped to the GRCh38.p12 reference genome using hisat2 (2.1.0)16 ...
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bioRxiv - Developmental Biology 2023Quote: ... The DNA fragments were extracted by phenol chloroform and used for sequencing on an Illumina HiSeq instrument (Illumina NovaSeq 6000) to generate 2 × 150-bp paired-end reads following the manufacturer’s instructions.
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bioRxiv - Developmental Biology 2023Quote: ... and sequenced on a Novaseq 6000 (Illumina). Shallow sequencing was performed to access the library quality and to adjust the subsequent sequencing depth based on the capture rate and the detected unique molecular indices (UMI).
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bioRxiv - Genetics 2023Quote: ... Library preparation and whole-genome sequencing by Illumina HiSeq2500 (2 × 150 bp paired-end ...
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bioRxiv - Microbiology 2023Quote: ... Multiplexed samples were spiked with 5% PhiX Control v3 DNA (Illumina) to account for low diversity among sgRNA sequences ...
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bioRxiv - Cancer Biology 2023Quote: ... using a NextSeq high output 75 cycle kit (Illumina). Reads were trimmed for Nextera and Illumina adapter sequences using trimgalore(64 ...
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bioRxiv - Genetics 2023Quote: ... Each pool was sequenced using standard paired-end (100bp) rapid run chemistry in a single lane on a HiSeq 2500 (Illumina, San Diego, CA). The final batch contained repeats from previous batches ...
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bioRxiv - Genetics 2023Quote: ... and sequenced with the TruSeq™ SBS Kit (Illumina) on an HiSeq 2500 (Illumina ...
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bioRxiv - Genetics 2023Quote: ... 700 ng of diluted RNA was mixed with 8.5 uL of EPH buffer (Illumina #20020599) and 1 uL of FastSelect rRNA-depletion enzyme (Qiagen #335377) ...
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bioRxiv - Genetics 2023Quote: ... all RNA samples were diluted to 93.3 ng/uL in ELB buffer (Illumina #20020599). Next ...
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bioRxiv - Microbiology 2023Quote: ... and sequenced on a MiSeq Next Generation sequencing platform (2x300 bp; Illumina; USA).
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bioRxiv - Physiology 2023Quote: ... Total RNA (500ng) was used to initiate the Illumina Stranded Total RNA Prep Ligation with Ribo-Zero Plus (Illumina 20040525) library preparation protocol ...
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bioRxiv - Physiology 2023Quote: ... end repaired and ligated with the appropriate indexed adaptors using the IDT for Illumina RNA UD unique dual indexes (UDI) (Illumina 20040553) to yield strand specific RNA-seq libraries.
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bioRxiv - Physiology 2023Quote: ... and KAPA Library Quant (Illumina) DNA Standards 1-6 (KAPA Biosystems KK4903) ...
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bioRxiv - Pathology 2023Quote: ... Barcoded libraries from each experimental sample were combined in equimolar concentrations of 1.5 pM prior to sequencing at 75bp x 1 (single-end) read metric on a NextSeq 550 (Illumina) system.
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bioRxiv - Pathology 2023Quote: ... Raw data were de-multiplexed (Illumina Demultiplex, Galaxy Version 1.0.0) and adapter sequences were removed (Clip adaptor sequence ...
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bioRxiv - Molecular Biology 2023Quote: ... Paired-end sequencing (2 x 50 nt) was performed on a NovaSeq 6000 system (Illumina).
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bioRxiv - Neuroscience 2023Quote: ... Positive founders identified in HRM analysis were then sequenced by Illumina MiSeq using gene specific primers with adapters (Table 2 ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were sequenced on HiSeq3000 (Illumina) using dual indexing and single 50 base-pair reads ...
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bioRxiv - Cell Biology 2023Quote: ... Novaseq 6000 system (Illumina) was used for sequencing (read length of 100LJbp ...
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bioRxiv - Cell Biology 2023Quote: ... Samples were sequenced using a NextSeq 5000 (Illumina) in the same flow cell and were pulled equimolarly.
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bioRxiv - Developmental Biology 2023Quote: ... and sequenced on MiSeq v2 and NextSeq 550 v2.5 mid-output kits (Illumina).
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bioRxiv - Plant Biology 2023Quote: ... and adapter trimming was performed with bcl-convert (Illumina, v3.9.3) .
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bioRxiv - Neuroscience 2023Quote: ... and sequenced using a NOVASeq6000 sequencer (Illumina).