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Citations for Qiagen :
151 - 200 of 5398 citations for Neural Precursor Cell Expressed Developmentally Down Regulated 9 NEDD9 Antibody since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Molecular Biology 2024Quote: ... Lysate was spun down at 14,000g for 30 min and supernatant was applied to Ni-NTA fast kit columns (Qiagen, 30600). Protein was washed with 16 mL buffer B (20 mM Hepes pH 7.3 ...
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bioRxiv - Microbiology 2019Quote: ... 9 mL 1M Tris HCl pH 7.5, 9 mL 0.5M EDTA pH 8.0, 11.25 mL 10% SDS, 22.5 mL Qiagen lysis reagent ...
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bioRxiv - Genomics 2021Quote: 72 µl Proteinase K digestion solution (63 uL Qiagen PKD buffer, 9 uL Proteinase K) was injected into the flow cell and incubated at 55°C for 30 min ...
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bioRxiv - Cancer Biology 2021Quote: ... Conventional pathway analysis on the top differentially expressed genes in each cluster was performed using IPA (Qiagen, Germantown, PA). Topological pathway analysis was performed on the top differentially expressed genes using the R package SPIA (v2.42.0).
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bioRxiv - Genomics 2021Quote: Functional analysis of the differentially expressed genes was conducted using Ingenuity Pathway Analysis (IPA, Qiagen, Redwood City, CA, USA) using probes with FDR-corrected p-value < 0.05 ...
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bioRxiv - Molecular Biology 2020Quote: ... Genes with a p-value < 0.05 and a Fold change > 1.5 were considered likely to be significantly differentially expressed and run in Ingenuity Pathway Analysis (Qiagen) for pathway analysis ...
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bioRxiv - Immunology 2022Quote: ... The list of differentially expressed genes was used as the input for the analysis with QIAGEN’s Ingenuity Pathway Analysis (IPA, Qiagen).
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bioRxiv - Genomics 2021Quote: The computed log fold changes of significantly differentially expressed genes (false discovery rate less than 0.05) were used in Ingenuity Pathway Analysis (IPA) by Qiagen. Upstream regulators were plotted according to their z-score and q- value of their overlap using GGplot2 R package ...
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bioRxiv - Developmental Biology 2022Quote: ... the pathways relevant to the significantly differentially expressed genes (FDR <= 0.05) were identified using the Core Analysis of the IPA software (QIAGEN Inc. ...
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bioRxiv - Immunology 2023Quote: ... of <0.05 were defined as differentially expressed genes (DEGs) and assessed using Ingenuity Pathway Analysis software (IPA, Ingenuity Systems, QIAGEN). DEG data were uploaded to IPA for core analysis and analysed with the global molecular network in the Ingenuity Pathways Knowledge Base (IPKB) ...
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bioRxiv - Neuroscience 2023Quote: ... and regulatory network interactions associated with differentially expressed genes were identified using QIAGEN Ingenuity Pathway Analysis (IPA) (QIAGEN Inc.). Genes with absolute fold change greater than 1.5 were included and molecules and relationships were filtered for “tissues/cell lines=amygdala ...
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bioRxiv - Molecular Biology 2021Quote: ... quantitative RT-PCR, and immunoblotting. For knock-down experiments, non-specific (siNS, No. 1027310) or AHR (siAHR, SI02780148) siRNA (QIAGEN, Inc.) was transfected with LipofectamineTM RNAiMAX (Thermo Fisher Scientific Inc. ...
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bioRxiv - Molecular Biology 2020Quote: ... The procedure entailed touch-down PCR amplifications followed by melting of the amplicons in an HRM capable thermal cycler (Qiagen, Germany). The assays were performed in 10-μl reaction volumes ...
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bioRxiv - Molecular Biology 2023Quote: ... The first pull-down RNA was then extracted by the Trizol/chloroform method and purified by miRNeasy mini column (Qiagen, 217004). This pull-down and RNA extraction was repeated once again to enrich SINEUP-GFP RNAs.
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bioRxiv - Plant Biology 2022Quote: ... Genomic DNAs from the pool and var2-9 were extracted with the DNeasy Plant kit (Qiagen). One μg of genomic DNA was used for library construction with the Truseq DNA PCR-free kit (Illumina ...
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bioRxiv - Cell Biology 2020Quote: Pathway analyses were done for differentially expressed genes using the Reactome online analysis tool51 and the Ingenuity Pathway Analysis software (Qiagen). Gene ontology term over-representation analysis was run using PANTHER (version 14.1 ...
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Microplastic consumption induces inflammatory signatures in the colon and prolongs a viral arthritisbioRxiv - Immunology 2021Quote: ... Diseases or Functions and Canonical pathways enriched in differentially expressed genes in direct and indirect interactions were investigated using Ingenuity Pathway Analysis (IPA) (QIAGEN).
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bioRxiv - Microbiology 2022Quote: ... and Diseases and Functions enriched in differentially expressed genes in direct and indirect interactions were investigated using Ingenuity Pathway Analysis (IPA) (QIAGEN).
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ACE2-lentiviral transduction enables mouse SARS-CoV-2 infection and mapping of receptor interactionsbioRxiv - Microbiology 2021Quote: ... Diseases and Functions and canonical pathways enriched in differentially expressed genes in direct and indirect interactions were investigated using Ingenuity Pathway Analysis (IPA) (QIAGEN).
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bioRxiv - Physiology 2019Quote: ... Differentially expressed genes were identified using the edgeR (negative binomial) feature in CLC Genomics WorkBench (CLCGWB) (Qiagen, Redwood City, CA) using raw read counts ...
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bioRxiv - Cell Biology 2021Quote: The GST fusion proteins were expressed in bacteria (E. coli, BL21) and purified by glutathione-Sepharose (Cat No. 27-4574-01, Qiagen) as per the manufacturer’s instructions ...
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bioRxiv - Genomics 2020Quote: ... Differentially expressed genes were overlaid onto canonical pathways and networks generated using differentially expressed genes in the dataset and the Ingenuity Pathway Analysis (IPA; QIAGEN Inc. ...
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bioRxiv - Immunology 2020Quote: ... Pathway Analysis was performed on the identified differentially expressed genes list using the Core Analysis function included in Ingenuity Pathway Analysis (IPA, Qiagen).
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bioRxiv - Immunology 2021Quote: Pathway analysis of differentially expressed genes in direct and indirect or direct only interactions were investigated using Ingenuity Pathway Analysis (IPA) (QIAGEN) (Shannon et al. ...
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bioRxiv - Neuroscience 2022Quote: ... Genes from human and mouse datasets were identified to be differentially expressed from each in comparison to a control group using either Ingenuity Pathway Analysis software (Qiagen), or Geo2R73 ...
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bioRxiv - Immunology 2022Quote: ... Genes with Fold Change greater than 1.5 and P value less than 0.05 obtained in the False Discovery Rate (FDR) analysis were considered differentially expressed (DEG) and submitted to functional enrichment analysis with Ingenuity Pathways Analysis software (IPA, Qiagen) using default parameters ...
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bioRxiv - Biophysics 2023Quote: ... The significantly differentially expressed genes with a log2 fold change <= -1 or >= 1 were input into Ingenuity Pathway Analysis (Qiagen) to determine pathway enrichment (significance determined by Fischer’s exact method).
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bioRxiv - Cancer Biology 2023Quote: ... Statistical results of differentially expressed genes from Partek Flow were analyzed using QIAGEN’s Ingenuity® Pathway Analysis (IPA®, QIAGEN) and gene set enrichment analysis (GSEA) ...
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bioRxiv - Physiology 2023Quote: ... Analysis of differentially expressed genes (DEG) for enrichment of gene ontology (GO) was done using Enrichr 36 and Ingenuity Pathway Analysis (Qiagen) 37 ...
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bioRxiv - Microbiology 2023Quote: ... GnTi expressed His-tagged gp140s and gp120s were purified from the harvested and clarified supernatant using Ni-NTA agarose beads (Qiagen) following manufacturer’s instructions.
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bioRxiv - Cancer Biology 2023Quote: Gene expression levels of approximately 4,000 differentially expressed genes compared to vehicle control at 72 h post treatment were compared using Ingenuity Pathway Analysis software (QIAGEN Inc. ...
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bioRxiv - Bioengineering 2024Quote: ... The output of differentially expressed proteins was further investigated using Ingenuity Pathway Analysis® (IPA; Qiagen®, Redwood City, USA). Data was also independently analysed using PEAKS studio (Bioinformatics Solutions® Inc. ...
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bioRxiv - Neuroscience 2021Quote: ... spun down (400 g × 10’ at 4 °C) and the pellet was resuspended in 600μ of Qiazol Lysis Reagent (Qiagen, Cat.No. 79306) and kept at −80 °C before sequencing.
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bioRxiv - Microbiology 2019Quote: ... Alignments were processed using JalView (Waterhouse et al, 2009) and CLC Genomic Workbench 9 (Qiagen, Venlo, Netherlands).
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bioRxiv - Molecular Biology 2023Quote: ... organs from adult mice (9-13 weeks old) were harvested and homogenized in Qiazol lysis reagent (Qiagen) and total RNA was isolated by phenol–chloroform extraction according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2023Quote: ... organs from adult mice (9-13 weeks old) were harvested and homogenized in Qiazol lysis reagent (Qiagen) and total RNA was isolated by phenol–chloroform extraction according to the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2022Quote: ... were enriched for mRNAs by pull-down of poly(A) RNA and libraries were prepared using the KAPA Stranded mRNA-Seq Kit (QIAGEN, GmbH, Hilden, Germany) according to the manufacturer’s protocol ...
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bioRxiv - Microbiology 2019Quote: ... Short CAP was expressed and His tag purified using Ni-NTA affinity purification under native conditions using the standard manufacturer’s protocol (Qiagen, Hilden, Germany). The shortCAP recombinant protein was used to immunize female New Zealand white rabbits (Covalab ...
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bioRxiv - Biochemistry 2020Quote: ... Canonical pathways associated with differentially expressed proteins were identified by Ingenuity Pathway Analysis (IPA, Ingenuity Systems, Qiagen, Redwood, CA, USA; www.ingenuity.com). This program is based on an algorithm that uses curated connectivity information from the literature to determine the network of interactions among the differentially expressed proteins and canonical pathways in which they are involved (Calvano et al. ...
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bioRxiv - Developmental Biology 2022Quote: ... Differentially expressed genes were identified using the Proportional Estimation test based on Kal’s test feature in CLCGWB (Qiagen, Redwood City, CA) using the raw read counts for our bulk RNAseq datasets ...
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bioRxiv - Microbiology 2021Quote: Pathway and molecular function and disease enrichment analysis of the significantly differentially expressed genes was carried out using the Ingenuity Pathway Analysis (IPA®) (QIAGEN Inc. ...
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bioRxiv - Immunology 2023Quote: ... Functional pathway and network analysis of differentially expressed proteins were performed using Ingenuity Pathway Analysis (IPA) (Qiagen, Redwood City, CA, USA). The pathway and network score were based on the hypergeometric distribution and calculated with the right-tailed Fisher’s exact test.
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bioRxiv - Molecular Biology 2019Quote: ... the cDNA template was amplified using microRNA-specific miRCURY LNATM primers for mature miR-9-5p (YP00204513, Qiagen). qRT-PCR was performed as described above ...
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bioRxiv - Neuroscience 2020Quote: ... RNA was isolated from 9 independent biological replicates for each genotype using the RNeasy Plus Kit (Qiagen #74136) according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2022Quote: ... Whole seedlings were harvested after 9 d and total RNA was extracted with RNeasy Plant Mini Kit (QIAGEN) following the manufacturer’s protocols ...
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bioRxiv - Bioengineering 2020Quote: ... The RBD wildtype and mutant proteins of SARS-CoV-2 spike with 10×his tag at N terminal were expressed in HEK 293 and purified with Ni-NTA affinity columns (Qiagen, Hilden, Germany).
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bioRxiv - Biochemistry 2020Quote: ... All UNG constructs were expressed in the Escherichia coli BL21(DE3) ung-151 strain and purified using Ni-NTA affinity resin (Qiagen, Hilden Germany) as described previously (Róna et al. ...
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bioRxiv - Genomics 2020Quote: ... Realtime-qPCR was performed on 11 differentially expressed (DE) miRNAs based on miRNA-seq results (|FC| ≥ 2, P < 0.05) using miScript SYBR Green PCR Kit (Qiagen 218073, California, USA) according to the manufacturer’s instructions with StepOne Applied Biosystems real-time PCR machine (Applied Biosystems ...
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bioRxiv - Biochemistry 2019Quote: ... and the supernatant was subjected into 9+ 9_ļ_ Ni2+ -nitrilotriacetic acid (Ni2+ -NTA) agarose resin (Qiagen, Valencia, CA, USA) for affinity chromatography purification ...
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bioRxiv - Genomics 2021Quote: RNA was extracted from fresh-frozen brain tissue (Brodmann area 9) using the RNeasy lipid tissue mini kit (QIAGEN); 20 mg of tissue was homogenised in 1 mL QIAzol lysis reagent using a 1 mL syringe successively with 23G and 25G needles ...