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• Spatial and temporal transcriptomics of SHH-medulloblastoma with chromothripsis identifies multiple genetic clones that resist to treatment and lead to relapse

  Ilia Kats, et al., bioRxiv - Cancer Biology 2023

  Quote: Imaging of the tissues was performed using the Slideview VS200 research slide scanner (Olympus, Hamamatsu ORCA-Fusion camera ...
• Propionate reinforces epithelial identity and reduces aggressiveness of non-small cell lung carcinoma via chromatin remodelling

  Vignesh Ramesh, et al., bioRxiv - Cancer Biology 2023

  Quote: ... Approximately 40-80 images were acquired amounting atleast 1000 cells to 10000 cells per sample condition using ScanR inverted microscope High-content Screening Station (Olympus) with 20X optics with in-built ScanR acquisition software as described previously [26] ...
• Activation of Ca²⁺ phosphatase Calcineurin regulates Parkin translocation to mitochondria and mitophagy

  Elena Marchesan, et al., bioRxiv - Cell Biology 2023

  Quote: ... Images were captured with a Veleta (Olympus Soft Imaging System) digital camera.
• Oncogene-like addiction to aneuploidy in human cancers

  Vishruth Girish, et al., bioRxiv - Cancer Biology 2023

  Quote: ... The cells were imaged and analyzed under a light microscope (20X magnification, Olympus CKX53).
• A novel role of USP7 in imparting partial EMT state in colorectal cancer through the DDX3X-β-catenin axis

  Bhaskar Basu, et al., bioRxiv - Cancer Biology 2023

  Quote: ... Images were captured at 60X and 120X optical zoom using the FluoView FV10i confocal laser scanning microscope (Olympus Life Science). Quantification of fluorescence colocalization was carried out using ImageJ.
• Transient septin sumoylation steers a Fir1-Skt5 protein complex between the split septin ring

  Judith Müller, et al., bioRxiv - Cell Biology 2023

  Quote: ... a 100× UPlanSApo 100× 1.4 oil ∞/0.17/FN26.5 objective (Olympus), a steady-state heating chamber (Weather station by Prescision Control) ...
• Transient septin sumoylation steers a Fir1-Skt5 protein complex between the split septin ring

  Judith Müller, et al., bioRxiv - Cell Biology 2023

  Quote: ... is provided with an IX71 microscope (Olympus), a 100× UPlanSApo 100× 1.4 oil ∞/0.17/FN26.5 objective (Olympus) ...
• Age-dependent structural reorganization of utricular ribbon synapses

  Susann Michanski, et al., bioRxiv - Cell Biology 2023

  Quote: ... and a 100x oil immersion objective (1.4 NA, Olympus). Images were acquired using the same microscope settings ...
• MANF stimulates autophagy and restores mitochondrial homeostasis to treat toxic proteinopathy

  Yeawon Kim, et al., bioRxiv - Cell Biology 2023

  Quote: ... and all images were captured by Olympus DP72 Capture Interface software ...
• A hierarchical pathway for assembly of the distal appendages that organize primary cilia

  Tomoharu Kanie, et al., bioRxiv - Cell Biology 2023

  Quote: ... The emission from the sample was collected using a high numerical aperture (NA) objective (UPLXAPO100XO, 100x, NA 1.45, Olympus) and filtered (ZT405/488/561/640rpcV3 dichroic ...
• Gaudichaudione H inhibits Herpes Simplex Virus-1 replication by regulating cellular nuclear factor-κB in an interferon-γ-inde-pendent manner

  Jiling Feng, Yuexun Tang, Wenwei Fu, Hongxi Xu, bioRxiv - Cell Biology 2023

  Quote: ... Images were taken by a confocal microscope (Olympus).
• Mechanically induced topological transition of spectrin regulates its distribution in the mammalian cortex

  Andrea Ghisleni, et al., bioRxiv - Cell Biology 2023

  Quote: MEFs expressing GFP-βII-spectrin constructs were imaged 24 hours after transfection with a confocal spinning disk microscope (Olympus) equipped with iXon 897 Ultra camera (ANDOR ...
• Human aneuploid cells depend on the RAF/MEK/ERK pathway for overcoming increased DNA damage

  Johanna Zerbib, et al., bioRxiv - Cancer Biology 2023

  Quote: ... Images were acquired using cellSens Imaging Software (Olympus), and merged using ImageJ ...
• MIIP downregulation promotes colorectal cancer progression via inducing adjacent adipocytes browning

  Qinhao Wang, et al., bioRxiv - Cancer Biology 2023

  Quote: ... Bright-field images were acquired using microscope (Olympus, Japan). For immunohistochemistry (IHC ...
• Multiscale imaging and quantitative analysis of plasma membrane protein-cortical actin interplay

  Aparajita Dasgupta, et al., bioRxiv - Biophysics 2023

  Quote: ... The penetration depth was set to 70 nm via the cellSens software (Olympus). Laser power was 2.31 mW at the coverslip ...
• Multiscale imaging and quantitative analysis of plasma membrane protein-cortical actin interplay

  Aparajita Dasgupta, et al., bioRxiv - Biophysics 2023

  Quote: ... Both live and fixed cells were then imaged at 37°C using an Olympus IX83 TIRF microscope equipped with a Z-Drift Compensator and a UAPO 100x/1.49 NA oil-immersion TIRF objective (Olympus, Tokyo, Japan). The microscope was equipped with an iXon 888 1k × 1k EMCCD Camera (Andor ...
• Lateral membrane organization as target of an antimicrobial peptidomimetic compound

  Adéla Melcrová, et al., bioRxiv - Biophysics 2023

  Quote: ... and ultra-small cantilevers BL-AC10FS-A2 (Olympus, Japan) with a spring constant of 0.1 N/m ...
• Pressure and ultrasound activate mechanosensitive TRAAK K⁺ channels through increased membrane tension

  Ben Sorum, et al., bioRxiv - Biophysics 2023

  Quote: ... An ultrasound wave was generated using a V326-SU (Olympus) focused-immersion ultrasonic transducer with a 0.375 in (9.525 mm ...
• Collective heterogeneity of mitochondrial potential in contact inhibition of proliferation

  Basil Thurakkal, et al., bioRxiv - Biophysics 2023

  Quote: ... mounted on an Olympus IX83 inverted microscope equipped with a scanning laser confocal head (Olympus FV3000). Time-lapse images of live samples were done in the live-cell chamber provided with the microscopy setup ...
• CEP76 is a critical regulator of male germ cell transition zone function and tail composition

  Brendan J. Houston, et al., bioRxiv - Cell Biology 2023

  Quote: ... All images were taken using cellSens software (Olympus, Notting Hill, Australia) on an Olympus BX-53 microscope (Olympus ...
• CEP76 is a critical regulator of male germ cell transition zone function and tail composition

  Brendan J. Houston, et al., bioRxiv - Cell Biology 2023

  Quote: ... on an Olympus BX-53 microscope (Olympus) equipped with an Olympus 392 DP80 camera or a Leica SP8 confocal ...
• Integrin-based adhesions promote cell-cell junction remodelling and cytoskeletal rearrangements to drive embryonic wound healing

  Michelle Ly, et al., bioRxiv - Cell Biology 2023

  Quote: ... and FluoView software (Olympus). 16-bit Z-stacks were acquired at 0.5 μm steps (21 slices per stack) ...
• Integrin-based adhesions promote cell-cell junction remodelling and cytoskeletal rearrangements to drive embryonic wound healing

  Michelle Ly, et al., bioRxiv - Cell Biology 2023

  Quote: ... a 60X oil-immersion lens (NA 1.35; Olympus), and Metamorph software (Molecular Devices) ...
• Collective heterogeneity of mitochondrial potential in contact inhibition of proliferation

  Basil Thurakkal, et al., bioRxiv - Biophysics 2023

  Quote: Fluorescence images were acquired using a 60X oil objective (PlanApo N 60x Oil, NA=1.42, Olympus) mounted on an Olympus IX83 inverted microscope equipped with a scanning laser confocal head (Olympus FV3000) ...
• Accurate and Rapid Detection of Peritoneal Metastasis from Gastric Cancer by AI-assisted Stimulated Raman Cytology

  Xun Chen, et al., bioRxiv - Biophysics 2023

  Quote: ... A 60X water immersion objective lens (LUMPlanFL N, 1.0 numerical aperture, Olympus) focused the lasers into the sample ...
• Accurate and Rapid Detection of Peritoneal Metastasis from Gastric Cancer by AI-assisted Stimulated Raman Cytology

  Xun Chen, et al., bioRxiv - Biophysics 2023

  Quote: ... The collinear pump and Stokes beams were coupled to a two-dimensional scanning galvanometer (GVS012-2D, Thorlabs) and then imported into an inverted microscope (IX73, Olympus). A 60X water immersion objective lens (LUMPlanFL N ...
• Accurate and Rapid Detection of Peritoneal Metastasis from Gastric Cancer by AI-assisted Stimulated Raman Cytology

  Xun Chen, et al., bioRxiv - Biophysics 2023

  Quote: ... The photons were collected by an 60X water condenser (LUMPlanFL N, 1.0 numerical aperture, Olympus). The pump beam was selected by a short-pass filter (ET980SP ...
• High-yield, ligation-free assembly of DNA constructs with nucleosome positioning sequence repeats for single molecule manipulation assays

  Yi-Yun Lin, et al., bioRxiv - Biophysics 2023

  Quote: ... We used a 40x oil-immersion objective (UPLFLN 40x, Olympus, Japan) and a CMOS sensor camera with 4096 × 3072 pixels (12M Falcon2 ...
• Voltage-dependent volume regulation controls epithelial cell extrusion and morphology

  Saranne J. Mitchell, et al., bioRxiv - Cell Biology 2023

  Quote: Time-lapse QPI and brightfield images were collected on an Olympus IX83 inverted microscope (Olympus Corp) using a 40x NA 0.75 objective ...
• Histone methyltransferase SUV39H1 regulates the Golgi complex via the nuclear envelope-spanning LINC complex

  Miyu Nishino, et al., bioRxiv - Cell Biology 2023

  Quote: ... Experiments were performed on a confocal microscope (FV-1000; Olympus) with a PlanApoN 60 (NA=1.4 ...
• Histone methyltransferase SUV39H1 regulates the Golgi complex via the nuclear envelope-spanning LINC complex

  Miyu Nishino, et al., bioRxiv - Cell Biology 2023

  Quote: ... phase-contrast images were obtained using a microscope CKX31 (Olympus, Tokyo, Japan) with a camera (BC-DKM01 ...
• Metabolic flux and flux balance analyses indicate the relevance of metabolic thermogenesis and aerobic glycolysis in cancer cells

  Nobuyuki Okahashi, et al., bioRxiv - Cancer Biology 2023

  Quote: ... equipped with a DP22 digital camera (Olympus) and CKX-CCSW software (Olympus) ...
• Metabolic flux and flux balance analyses indicate the relevance of metabolic thermogenesis and aerobic glycolysis in cancer cells

  Nobuyuki Okahashi, et al., bioRxiv - Cancer Biology 2023

  Quote: ... IX71 inverted microscope (Olympus, Tokyo, Japan) equipped with an objective lens (LCPlanFl 20×/0.40 Ph1 ...
• Peripheral extracellular vesicle-derived miR-150-3p exacerbates acute kidney injury following acute pancreatitis by promoting ferroptosis through FTH1 signaling

  Ji-tao Cui, et al., bioRxiv - Cell Biology 2023

  Quote: ... Observations were made under a fluorescence microscope (Olympus, Tokyo, Japan)
• Physicochemical properties of the vacuolar membrane and cellular factors determine formation of vacuolar invaginations

  Yoko Kimura, et al., bioRxiv - Cell Biology 2023

  Quote: ... cells were imaged using a fluorescent microscope (Olympus BX51) equipped with a CMOS camera (ORCA-Fusion ...
• Coupling During Collective Cell Migration is Controlled by a Vinculin Mechanochemical Switch

  T. Curtis Shoyer, et al., bioRxiv - Cell Biology 2023

  Quote: An Olympus inverted fluorescent microscope (Olympus IX83, Tokyo, Japan) was used to image samples ...
• LUZP1 regulates the constriction velocity of the contractile ring during cytokinesis

  Toshinori Hyodo, et al., bioRxiv - Cell Biology 2023

  Quote: ... Immunostained images were acquired using a BX60 fluorescence microscope (Olympus, Tokyo, Japan), a BZ-9000 fluorescence microscope (Keyence ...
• Coupling During Collective Cell Migration is Controlled by a Vinculin Mechanochemical Switch

  T. Curtis Shoyer, et al., bioRxiv - Cell Biology 2023

  Quote: ... cell islands were imaged at 48 and 72hrs using phase microscopy with a 10x objective (UPlan FLN/NA0.3 10x Objective, Olympus) on an Olympus inverted fluorescent microscope (Olympus IX83 ...
• Coupling During Collective Cell Migration is Controlled by a Vinculin Mechanochemical Switch

  T. Curtis Shoyer, et al., bioRxiv - Cell Biology 2023

  Quote: ... on an Olympus inverted fluorescent microscope (Olympus IX83, Tokyo, Japan) equipped with a sCMOS ORCA-Flash4.0 V2 camera (Hamamatsu Photonics ...
• LUZP1 regulates the constriction velocity of the contractile ring during cytokinesis

  Toshinori Hyodo, et al., bioRxiv - Cell Biology 2023

  Quote: ... or an FV3000 laser scanning confocal microscope (Olympus).
• Coupling During Collective Cell Migration is Controlled by a Vinculin Mechanochemical Switch

  T. Curtis Shoyer, et al., bioRxiv - Cell Biology 2023

  Quote: ... a fixed grid of images was acquired using Metamorph acquisition software (Olympus). For each sample ...
• Coupling During Collective Cell Migration is Controlled by a Vinculin Mechanochemical Switch

  T. Curtis Shoyer, et al., bioRxiv - Cell Biology 2023

  Quote: ... and software-based autofocus were computer-controlled using Metamorph (Olympus) software ...
• Primed to resolve: A single cell atlas of the shoulder capsule reveals a cellular basis for resolving inflammatory fibrosis

  Michael TH Ng, et al., bioRxiv - Cell Biology 2023

  Quote: ... mounted in DPX mounting medium (Fischer Scientific) and imaged on a Brightfield microscope (Olympus). Images were acquired on a MOTIC slide scanner (Leica Biosystems ...
• Identification of a mitochondrial targeting sequence in cathepsin D and its localization in mitochondria

  Naoki Ikari, Hirofumi Arakawa, bioRxiv - Cell Biology 2023

  Quote: ... and observed using a FLUOVIEW FV3000 confocal laser scanning microscope (Olympus).
• Robust and fast multicolor Single Molecule Localization Microscopy using spectral separation and demixing

  Karoline Friedl, et al., bioRxiv - Cell Biology 2023

  Quote: ... NA 1.49 oil objective (APON100XHOTIRF, Olympus) or a Nikon Ti2 inverted microscope stand equipped with a motorized stage ...
• Identification of a mitochondrial targeting sequence in cathepsin D and its localization in mitochondria

  Naoki Ikari, Hirofumi Arakawa, bioRxiv - Cell Biology 2023

  Quote: Confocal microscopy images were taken with a FLUOVIEW FV3000 confocal laser scanning microscope (Olympus). Line-scan profiles were acquired using MetaMorph ver ...
• Crb3 stabilizes activated Ezrin-Radixin-Moesin to organize the apical domain of multiciliated cells

  Céline Burcklé, et al., bioRxiv - Cell Biology 2023

  Quote: ... microscope and a Veleta camera (Olympus Japan).
• Robust and fast multicolor Single Molecule Localization Microscopy using spectral separation and demixing

  Karoline Friedl, et al., bioRxiv - Cell Biology 2023

  Quote: The SMLM microscope used for all imaging is based on either an Olympus IX81 inverted microscope stand equipped with a focus stabilization system (ZDC2, Olympus) and a 100X ...
• Utilization of an Artery-on-a-chip to unravel novel regulators and therapeutic targets in vascular diseases

  Valentina Paloschi, et al., bioRxiv - Cell Biology 2023

  Quote: ... Images were acquired with an Olympus FLUOVIEW FV3000 (Olympus, Tokyo, Japan) confocal microscope.
• Effect of caffeine and other xanthines on liver sinusoidal endothelial cell ultrastructure

  Hong Mao, et al., bioRxiv - Cell Biology 2023

  Quote: ... with a 60X 1.42NA oil-immersion objective (Olympus). 3D-SIM image stacks of 1 μm were acquired with a z-distance of 125 nm and with 15 raw images per plane (five phases ...