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Citations for PacBio :
1 - 50 of 279 citations for Rat Mesoderm Specific Transcript Homolog Protein MEST ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... we relied on a combination of protein and transcript evidence constructed from PacBio Iso-Seq and bulk Illumina RNA-seq for our focal species as well as related species in the tribe Sileneae ...
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bioRxiv - Plant Biology 2023Quote: Full-length transcripts (PacBio sequencing) and previously generated PE mRNA-seq reads (Brilhaus et al. ...
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bioRxiv - Genomics 2023Quote: ... we generated high-quality transcripts from PacBio long RNA reads using isoseq3 v3.4.0 [15] and aligned them to the QX1410 genome using minimap2 [38] ...
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bioRxiv - Genomics 2023Quote: The high-quality transcripts generated from PacBio IsoSeq data were used to identify putative target sequences ...
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bioRxiv - Genomics 2021Quote: ... we generated high-quality transcripts from Pacific Biosciences (PacBio) long RNA reads using the isoseq3 pipeline v3.4.0 ([CSL STYLE ERROR ...
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bioRxiv - Plant Biology 2019Quote: Spartina full-length non-chimeric (FLNC) transcripts were identified from PacBio SMRT reads using the PacBio’s SMRT Analysis pipeline (v2.3.0 ...
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bioRxiv - Genomics 2022Quote: ... (c) CAGE support of TSS of transcript isoforms constructed from PacBio cDNA protocol ...
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bioRxiv - Genomics 2022Quote: (a) Quantseq3 support of TES of transcript isoforms constructed from PacBio cDNA protocol with TALON before and after transcript end site correction with LAPA ...
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bioRxiv - Genomics 2023Quote: ... The transcript hints were obtained by mapping RNA sequences from PacBio Iso-Seq sequencing to the genome using GMAP v2020-10-27 (Wu and Watanabe ...
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bioRxiv - Genomics 2023Quote: IsoSeq transcripts fasta file was generated using SMRT Link 12.0 (PacBio) with default parameters ...
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bioRxiv - Neuroscience 2020Quote: ... truncated transcripts (*200 bp difference in average length of ONT vs PacBio), and mis-mapping of overlapping splice sites ...
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bioRxiv - Genomics 2021Quote: ... Transcript isoforms for each sample were generated with the Iso-Seq3 pipeline (PacBio) implemented in SMRTlink (PacBio) ...
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bioRxiv - Genetics 2019Quote: ... we chose the transcripts of Psk7xS14 (mapped to the PacBio assembly of Wa58-) and Wa63-(PacBio assembly of the same strain ...
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bioRxiv - Genomics 2020Quote: ... we included only transcripts that were validated by two different library preparation techniques (PacBio Iso-Seq & MinION 1D or PacBio Iso-Seq and Lexogen TeloPrime or MinION 1D and Lexogen TeloPrime) ...
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bioRxiv - Genetics 2019Quote: 100-150ng of total RNA per reaction was reverse transcribed using the Clontech SMARTer cDNA synthesis kit and 12 sample specific barcoded oligo dT (with PacBio 16mer barcode sequences ...
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bioRxiv - Genomics 2020Quote: ... we included only transcripts that were validated by two different library preparation techniques (PacBio Iso-Seq & MinION 1D or PacBio Iso-Seq and Lexogen TeloPrime or MinION 1D and Lexogen TeloPrime) ...
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bioRxiv - Genetics 2020Quote: ... Genes found to be L5-specific (present in completed PacBio and Illumina genomes) were also checked for SNPs in these genes using each of the L5 completed PacBio genomes as a reference ...
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bioRxiv - Systems Biology 2022Quote: ... Analysis of the collected spectra files performed either using the HUVEC sample-specific database (HUVEC-derived PacBio reads + GENCODE entries ...
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bioRxiv - Genomics 2021Quote: ... Additional benchmarking on three high-quality canid genomes further revealed robustness to both assembly used (breed-specific genome versus CanFam v3.1) and sequencing technology (PacBio vs ONT), although PacBio data appears to over-estimate genome size more than ONT data (Figure S1).
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bioRxiv - Neuroscience 2020Quote: ... gRNA was combined with Cas9 protein (PacBio) and injected into one-cell stage embryos ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Using SMRTBell template Prep Kit 1.0 and SMRTbell Barcoded Adaptater kit 8A or 8B kits (PacBio), samples (1 µg ...
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bioRxiv - Genomics 2020Quote: ... non-unique-PacBio+Uniprot (peptides mapped to both PacBio and Uniprot proteins), and multigene (peptides mapped to multiple genes).
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bioRxiv - Genomics 2020Quote: ... Sequencing was performed on a PacBio Sequel instrument using the Sequel® Binding Kit and Internal control Kit 3.0 and the Sequel® Sequencing Kit 3.0 (PacBio). Long read data was assembled using the HGAP4 assembler.
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bioRxiv - Genomics 2023Quote: ... and the Express Template Prep Kit v2 and SMRTbell Cleanup Kit v2 (PacBio). The library was size-selected on a PippinHT instrument (Sage Science ...
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bioRxiv - Microbiology 2021Quote: ... SMRTbell libraries were prepared using the SMRTbell Express Template Prep Kit 2.0 (PacBio kit). Long read data were assembled by canu 2.1.1(44) ...
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bioRxiv - Microbiology 2024Quote: ... The amplicon library was contracted with the SMRTbell® prep kit 3.0 library prep kit (PacBio) following the protocol ...
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bioRxiv - Plant Biology 2021Quote: ... A Template Prep Kit (PacBio, USA) was used to remove failed ligation products ...
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bioRxiv - Microbiology 2019Quote: ... The SMARTbell Template Prep Kit (PacBio) was used to add adaptors to amplicons ...
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bioRxiv - Microbiology 2019Quote: ... the 20 kb BluePippin kit (PacBio) was used and DNA libraries were sequenced on a PacBio Sequel System with Sequel Sequencing chemistry 2.1 ...
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bioRxiv - Developmental Biology 2023Quote: ... Iso-Seq Express Oligo Kit (PacBio) and SMRTbell Express Template Prep Kit 2.0 (PacBio) ...
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bioRxiv - Plant Biology 2019Quote: ... The DNA/Polymerase Binding Kit P6 (PacBio) was used for DNA synthesis after the sequencing primer annealed to the SMRTbell template ...
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bioRxiv - Genomics 2021Quote: ... Using SMRTBell template Prep Kit 1.0 (PacBio), a DNA and END damage repair step was performed on 5 μg of sample ...
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bioRxiv - Cancer Biology 2022Quote: ... Sequencing Kit 2.0 (PacBio, 101-389-001) and Instrument Chemistry Bundle Version 11.0 were used ...
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bioRxiv - Genomics 2023Quote: ... Using SMRTBell template Prep Kit 1.0 (PacBio), a DNA and END damage repair step was performed on 15µg of unshared sample ...
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bioRxiv - Genetics 2019Quote: ... Sheared DNA was barcoded and multiplexed for PacBio sequencing using Template Prep Kit 1.0-SPv3 and Barcoded Adapter Kit 8A (PacBio). Genomic DNA was sequenced using the PacBio Sequel system using version 3.0 sequencing reagents (PacBio ...
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bioRxiv - Genomics 2023Quote: ... An Iso-Seq cDNA library was generated with the Iso-Seq Express Oligo Kit and the SMRTbell Express Template Prep Kit 2.0 (PacBio). The Iso-Seq library was sequenced using a single SMRTcell on a Sequel I at the D-BSSE (Basel ...
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Evolutionary conserved aspects of animal nutrient uptake and transport in sea anemone vitellogenesisbioRxiv - Evolutionary Biology 2022Quote: The Cas9-mediated knock-in injection was performed by modifying previously described protocols for CRISPR/Cas9-mediate mutagenesis and used 0,75μg/μl nls-Cas9 protein (PacBio), 75ng/μl of each guide RNA ...
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bioRxiv - Developmental Biology 2023Quote: The Cas9-mediated knock-in injection was performed by modifying previously described protocols for CRISPR/Cas9-mediated mutagenesis and used 0,75μg/μl nls-Cas9 protein (PacBio), 75ng/μl of each guide RNA ...
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bioRxiv - Genomics 2020Quote: ... HMW DNA was used to generate HiFi libraries via the SMRTbell Express Template Prep Kit v2 and SMRTbell Enzyme Clean Up kits (PacBio). Size selection was performed with SageELF (Sage Science) ...
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bioRxiv - Genomics 2023Quote: ... The sheared material was subjected to SMRTbell library preparation using the Express Template Prep Kit v2 and SMRTbell Cleanup Kit v2 (PacBio). After checking for size and quantity ...
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bioRxiv - Genomics 2024Quote: ... DNA was extracted using either the Nanobind Tissue Big DNA kit (cell line and brain) or the Nanobind HT 1ml blood kit (blood) (PacBio). For the cell line and blood samples ...
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bioRxiv - Microbiology 2021Quote: ... using the Sequel II Sequencing Kit 2.0 (PacBio). Sequencing data quality were checked ...
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bioRxiv - Genetics 2021Quote: ... and the Express Library Prep Kit v2 (PacBio), size selecting on the SageELF platform (Sage Science ...
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bioRxiv - Plant Biology 2022Quote: ... and SMRTbell Express Template Prep Kit 2.0 (PacBio). Thereafter ...
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bioRxiv - Genetics 2022Quote: ... The SMRTBell® Template Prep Kit 1.0 (PacBio) was then used to prepare 14-kilobase libraries ...
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bioRxiv - Genomics 2023Quote: ... using the Nanobind CBB DNA extraction kit (PacBio), according to the manufacturer’s instructions with modifications ...
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bioRxiv - Developmental Biology 2023Quote: ... and SMRTbell Express Template Prep Kit 2.0 (PacBio). Samples were sequenced using PacBio Sequel II 8M SMRT cell (version 2.1 ...
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bioRxiv - Genomics 2024Quote: ... The SMRTbell Express Template Prep Kit 2.0 (PacBio) was used to construct the PacBio sequencing library ...
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bioRxiv - Genomics 2022Quote: ... Barcoded PacBio SMRTBell adapters from the PacBio 8A barcoded adapter kit (Barcoded Overhang Adapter Kit - 8A, PacBio PN: 101-628-400) were added to ligation products following an adapted version of the PacBio Microbial Multiplexing PacBio protocol (Part Number 101-696-100 Version 07 (July 2020) ...
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bioRxiv - Microbiology 2021Quote: ... using the Sequel II Sequencing Kit 1.0 (PacBio, USA) with the Sequel II SMRT Cell 8M (PacBio ...