Labshake search
Citations for PacBio :
1 - 50 of 283 citations for Rat High Mobility Group Protein B1 HMGB1 ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... high molecular weight (HMW) DNA was obtained with the Nanobind plant nuclei kit (Circulomics-PacBio), either from roots or young leaves ...
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bioRxiv - Neuroscience 2024Quote: High molecular weight (HMW) was extracted using PacBio’s Nanobind CBB Kit (Pacbio, 102-301-900) from 2 x 106 cells with the Nanobind adherent cultured cells protocol ...
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bioRxiv - Genomics 2024Quote: ... Further selection of high molecular weight DNA was performed using the Short Read Eliminator (SRE) kit (PacBio) according to the manufacturer’s guide ...
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bioRxiv - Genomics 2021Quote: ... high-quality long reads from PacBio sequencing were selected and assembled using the Falcon assembler v.1.4.2 (Chin et al ...
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bioRxiv - Molecular Biology 2023Quote: High molecular weight DNA was extracted from frozen pellets (1 million cells) using the Nanobind HMW DNA Extraction kit (PacBio) following the manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... High molecular weight DNA was extracted from blood cells embedded in agarose blocks using the Nanobind CBB kit (Circulomics/PacBio). Construction of PacBio SMRT-bell sequencing libraries and long read sequencing on PacBio Sequel II were conducted at the Roy J ...
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bioRxiv - Developmental Biology 2022Quote: High-quality isoforms were generated from PacBio reads using the Iso-Seq analysis pipeline of single-molecule real-time (SMRT ...
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bioRxiv - Genomics 2023Quote: ... we generated high-quality transcripts from PacBio long RNA reads using isoseq3 v3.4.0 [15] and aligned them to the QX1410 genome using minimap2 [38] ...
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bioRxiv - Genomics 2023Quote: The high-quality transcripts generated from PacBio IsoSeq data were used to identify putative target sequences ...
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bioRxiv - Genomics 2023Quote: 1,984,661 Pacific Biosciences high fidelity (PacBio HiFi) reads containing a total of 29,667,167,600 bases and a mean length of 14,948 bp were used for the assembly ...
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bioRxiv - Genomics 2023Quote: ... The DNA was then selected for high molecular weight DNA using the PacBio Short Read Eliminator kit (PacBio, Menlo Park, CA, USA). Concentration was assessed using the dsDNA BR assay on a Qubit fluorometer (Thermo Fisher Scientific ...
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bioRxiv - Microbiology 2023Quote: High-quality HiFi reads were extracted from PacBio sequencing data requiring a minimum of 3 full passes in CCS command (v6.0.0 ...
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bioRxiv - Genomics 2023Quote: ... High-quality long-read datasets (PacBio and Nanopore) are available for chicken (see Supplementary Table 3) ...
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bioRxiv - Microbiology 2024Quote: Extraction of high molecular weight DNA from overnight cultures of CPs was accomplished using the Nanobind CBB kit (PacBio catalog no.102-301-900). Barcoded sequencing libraries were prepared using the SMRTbell prep kit 3.0 (PacBio catalog no.102-141-700 ...
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bioRxiv - Genomics 2021Quote: ... we generated high-quality transcripts from Pacific Biosciences (PacBio) long RNA reads using the isoseq3 pipeline v3.4.0 ([CSL STYLE ERROR ...
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bioRxiv - Genomics 2020Quote: ... High quality sequence data was proofread and generated by PacBio’s circular consensus sequencing (CCS) ...
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bioRxiv - Genomics 2021Quote: High molecular weight DNA for Pacific Biosciences (PacBio, Menlo Park, USA) Single-Molecule Real-Time (SMRT ...
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bioRxiv - Genomics 2024Quote: ... The extracted HMW gDNA was purified using high-salt-phenol-chloroform (PacBio) to remove coprecipitating contaminants ...
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bioRxiv - Genomics 2023Quote: ... This observation confirmed the high quality of the primary assembly achieved from PacBio reads including a post-processing step using Arrow (part of the GenomicConsensus package from PacBio) ...
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bioRxiv - Neuroscience 2020Quote: ... gRNA was combined with Cas9 protein (PacBio) and injected into one-cell stage embryos ...
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bioRxiv - Genomics 2022Quote: q20 High Fidelity (HiFi) reads were generated with the Circular Consensus Sequencing tool from PacBio® ccs v6.0.0 (--min-passes 3 --min-length 10 --max-length 60000 --min-rq 0.99) ...
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bioRxiv - Genomics 2019Quote: ... SMART library was prepared from high molecular weight genomic DNA (>50kbp) and applied to sequencing by PacBio Sequel.
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bioRxiv - Cell Biology 2023Quote: ... The RNA peaks on the electropherogram were considered high quality and processed further for sequencing by PacBio.
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bioRxiv - Evolutionary Biology 2023Quote: ... Using SMRTBell template Prep Kit 1.0 and SMRTbell Barcoded Adaptater kit 8A or 8B kits (PacBio), samples (1 µg ...
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bioRxiv - Genetics 2020Quote: ... We skipped the misjoin detection step due to its high false-positive rate in the contigs derived from PacBio long reads ...
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bioRxiv - Bioengineering 2019Quote: ... pusillus grown on Potato Dextrose Agar (PDA) was used to extract the genomic DNA (gDNA) through a high salt phenol-chloroform cleanup protocol recommended by PacBio® systems ...
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bioRxiv - Genomics 2020Quote: ... total RNA was isolated from the abomasum pyloric with high expression of MUC6 from two heterozygous goats and sequenced by PacBio Sequel ...
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bioRxiv - Evolutionary Biology 2023Quote: ... were subsequently constructed for single-molecule real-time (SMRT) sequencing to generate long high-fidelity (HiFi) reads with the Pacific Biosciences (PacBio) Sequel II system at the West German Genome Sequencing Center of HHU Düsseldorf.
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bioRxiv - Microbiology 2023Quote: ... CCS reads were filtered for those with size 3100- 3394bp and high-quality reads (Phred>20) using Filter FASTQ and mapped to the LASV reference seq (MH358389) with Minimap2 (PacBio HiFi reads vs reference mapping (- k19 -w19 -U50,500 -g10k -A1 -B4 -O6,26 -E2,1 -s200)) ...
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bioRxiv - Genomics 2020Quote: ... non-unique-PacBio+Uniprot (peptides mapped to both PacBio and Uniprot proteins), and multigene (peptides mapped to multiple genes).
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bioRxiv - Genomics 2020Quote: ... Sequencing was performed on a PacBio Sequel instrument using the Sequel® Binding Kit and Internal control Kit 3.0 and the Sequel® Sequencing Kit 3.0 (PacBio). Long read data was assembled using the HGAP4 assembler.
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bioRxiv - Genomics 2023Quote: ... we relied on a combination of protein and transcript evidence constructed from PacBio Iso-Seq and bulk Illumina RNA-seq for our focal species as well as related species in the tribe Sileneae ...
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bioRxiv - Genomics 2023Quote: ... and the Express Template Prep Kit v2 and SMRTbell Cleanup Kit v2 (PacBio). The library was size-selected on a PippinHT instrument (Sage Science ...
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bioRxiv - Genomics 2022Quote: ... hatsudake JH5 was de novo sequenced using high throughput Illumina Hiseq X-Ten and PacBio RSII long-read sequencing platforms (PacBio P6-C4) at Beijing Novogene Technology ...
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bioRxiv - Microbiology 2021Quote: ... SMRTbell libraries were prepared using the SMRTbell Express Template Prep Kit 2.0 (PacBio kit). Long read data were assembled by canu 2.1.1(44) ...
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bioRxiv - Microbiology 2024Quote: ... The amplicon library was contracted with the SMRTbell® prep kit 3.0 library prep kit (PacBio) following the protocol ...
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bioRxiv - Plant Biology 2021Quote: ... A Template Prep Kit (PacBio, USA) was used to remove failed ligation products ...
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bioRxiv - Microbiology 2019Quote: ... The SMARTbell Template Prep Kit (PacBio) was used to add adaptors to amplicons ...
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bioRxiv - Microbiology 2019Quote: ... the 20 kb BluePippin kit (PacBio) was used and DNA libraries were sequenced on a PacBio Sequel System with Sequel Sequencing chemistry 2.1 ...
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bioRxiv - Developmental Biology 2023Quote: ... Iso-Seq Express Oligo Kit (PacBio) and SMRTbell Express Template Prep Kit 2.0 (PacBio) ...
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bioRxiv - Plant Biology 2019Quote: ... The DNA/Polymerase Binding Kit P6 (PacBio) was used for DNA synthesis after the sequencing primer annealed to the SMRTbell template ...
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bioRxiv - Genomics 2021Quote: ... Using SMRTBell template Prep Kit 1.0 (PacBio), a DNA and END damage repair step was performed on 5 μg of sample ...
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bioRxiv - Cancer Biology 2022Quote: ... Sequencing Kit 2.0 (PacBio, 101-389-001) and Instrument Chemistry Bundle Version 11.0 were used ...
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bioRxiv - Genomics 2023Quote: ... Using SMRTBell template Prep Kit 1.0 (PacBio), a DNA and END damage repair step was performed on 15µg of unshared sample ...
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bioRxiv - Genetics 2019Quote: ... Sheared DNA was barcoded and multiplexed for PacBio sequencing using Template Prep Kit 1.0-SPv3 and Barcoded Adapter Kit 8A (PacBio). Genomic DNA was sequenced using the PacBio Sequel system using version 3.0 sequencing reagents (PacBio ...
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bioRxiv - Genomics 2023Quote: ... An Iso-Seq cDNA library was generated with the Iso-Seq Express Oligo Kit and the SMRTbell Express Template Prep Kit 2.0 (PacBio). The Iso-Seq library was sequenced using a single SMRTcell on a Sequel I at the D-BSSE (Basel ...
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Evolutionary conserved aspects of animal nutrient uptake and transport in sea anemone vitellogenesisbioRxiv - Evolutionary Biology 2022Quote: The Cas9-mediated knock-in injection was performed by modifying previously described protocols for CRISPR/Cas9-mediate mutagenesis and used 0,75μg/μl nls-Cas9 protein (PacBio), 75ng/μl of each guide RNA ...
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bioRxiv - Developmental Biology 2023Quote: The Cas9-mediated knock-in injection was performed by modifying previously described protocols for CRISPR/Cas9-mediated mutagenesis and used 0,75μg/μl nls-Cas9 protein (PacBio), 75ng/μl of each guide RNA ...
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bioRxiv - Genomics 2020Quote: ... HMW DNA was used to generate HiFi libraries via the SMRTbell Express Template Prep Kit v2 and SMRTbell Enzyme Clean Up kits (PacBio). Size selection was performed with SageELF (Sage Science) ...
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bioRxiv - Genomics 2023Quote: ... The sheared material was subjected to SMRTbell library preparation using the Express Template Prep Kit v2 and SMRTbell Cleanup Kit v2 (PacBio). After checking for size and quantity ...