Labshake search
Citations for PacBio :
1 - 50 of 65 citations for 6H Dibenzo b d pyran 3 pentanaminium 6a 7 10 10a tetrahydro 1 hydroxy N N N 6 6 9 hexamethyl 6aR trans 9CI since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Evolutionary Biology 2021Quote: ... HGAP4 in SMRT Link v.6 (PacBio) was used to obtain polished long reads in fastq format ...
-
bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
-
bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 3’ PacBio round 2 reverse primer (PacBio_3pri_RND2), and 25 µL KOD Hot Start Master Mix ...
-
bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
-
bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
-
bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
-
bioRxiv - Evolutionary Biology 2021Quote: ... A 20kb SMRTbell template library was constructed for each pool separately and sequenced individually on the PacBio Sequel system using 3 PacBio SMRT® sequencing cells per library (6 PacBio SMRT® sequencing cells in total)(Macrogen Europe) ...
-
bioRxiv - Genomics 2021Quote: PacBio subreads were extracted with the SMRT Link (version 6) software tool from PacBio. The extracted subreads were then corrected ...
-
bioRxiv - Genomics 2023Quote: ... The library with 0.5-6 kb cDNA fragments was sequenced with Iso-Seq mode on PacBio Sequel II system (PacBio, USA).
-
bioRxiv - Genomics 2024Quote: ... (0.75% DF Marker S1 high pass 6-10kb v3) and DNA was further purified with PacBio AMPure beads and treated with DNA damage repair mix (PacBio) (37°C for 60 mins ...
-
bioRxiv - Microbiology 2024Quote: ... 2 µL of 10 µM 3’ PacBio round 2 reverse primer (PacBio_3pri_RND2), and 25 µL KOD Hot Start Master Mix ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... About 6 pg of DNA was sheared using a 26G blunt end needle (PacBio protocol PN 101-181-000 Version 05) to ∼40 kb fragments ...
-
bioRxiv - Immunology 2021Quote: ... with overhanging sequences containing identifiers (sequences of 6 base-pairs) and adapter sequences appropriate for Illumina HiSeq platforms (or PacBio; Pacific Biosciences). Unique identifiers were used for each T-cell population targeting one antigen ...
-
bioRxiv - Genomics 2020Quote: ... (b) All SVs detected by PacBio CCS Reads and supported by either PacBio CLR or ONT were retained ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... and barcoded using barcoded overhang adapters 8A/B (PacBio) and nuclease treated with SMRTbell enzyme cleanup kit 1.0 (PacBio) ...
-
bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
-
bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 5’ PacBio round 2 forward primer (PacBio_5pri_RND2), 1 µL of 10 µM 3’ PacBio round 2 reverse primer (PacBio_3pri_RND2) ...
-
bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
-
bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
-
bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
-
bioRxiv - Plant Biology 2020Quote: ... A total of 24 Single-Molecule Real-Time (SMRT) cells (9 from PacBio RSII and 15 from PacBio Sequel) for Korso and 15 SMRT cells (all from PacBio Sequel ...
-
bioRxiv - Plant Biology 2020Quote: ... A total of 24 Single-Molecule Real-Time (SMRT) cells (9 from PacBio RSII and 15 from PacBio Sequel) for Korso and 15 SMRT cells (all from PacBio Sequel ...
-
bioRxiv - Plant Biology 2020Quote: ... and 3 SMRT cells (v3) respectively (PacBio RSII ...
-
bioRxiv - Plant Biology 2023Quote: ... a fraction of short fragments was removed from 9 μg of total DNA using the Short-Read Eliminator Kit XL (PacBio, SKU 102-208-400), according to the manufacturer’s recommendations ...
-
bioRxiv - Genomics 2022Quote: ... SMRT sequencing on a Sequel I machine (3 SMRTCells; PacBio) and dedicated library preparation were performed according to provider’s procedure.
-
bioRxiv - Genetics 2023Quote: ... which preserves 3’ and 5’ end information (PacBio, Menlo Park, CA). A PacBio SMRTbell library was constructed using these PCR-amplified full-length cDNA transcripts and sequenced using a Sequel II ...
-
bioRxiv - Microbiology 2020Quote: ... the number of intervening days between serial isolations, time point (A or B, being earlier and later time points respectively) and sequencing technology (Illumina [I] or PacBio[P]) (Figure 3B) ...
-
bioRxiv - Genomics 2021Quote: ... and 3) proportion of SVs that were not overlapped by SVs from PacBio assemblies in the same genome (Figure S3D-G) ...
-
bioRxiv - Genomics 2019Quote: ... including L1Hs insertion sequences and 5’ and 3’ target site duplicate sequences from PacBio data ...
-
bioRxiv - Cancer Biology 2024Quote: ... MAS-Seq for 10x Single Cell 3’ kit (PacBio, cat. no. 102-659-600), and individually created oligos ...
-
bioRxiv - Genomics 2023Quote: ... A Covaris G-Tube was then used to shear 10 µg of DNA to a size range of ∼10-30 kb followed by bead purification with PB Beads (PacBio). The HiFi sequencing library was constructed following manufacturer’s protocols using SMRTbell Express Template Prep Kit 2.0 ...
-
bioRxiv - Microbiology 2020Quote: The PacBio reads were assembled using HGAP (RS_HGAP_Assembly.3 protocol implemented in PacBio smrtanalysis 2.3.0 software package) and polished using Quiver [24] ...
-
bioRxiv - Microbiology 2020Quote: ... The genome of the strain QMA0248 was sequenced using 3 SMRT cells on the Pacific Biosciences (PacBio) RS II platform and P4C2 sequencing chemistry ...
-
bioRxiv - Genomics 2020Quote: ... The obtained reads were clustered using the Iso-Seq 3 pipeline implemented in SMRT Link ver.8.0 (PacBio) and then mapped onto the assembled genome with Minimap2 (Li et al ...
-
bioRxiv - Genomics 2024Quote: ... The resulting cDNA was used as input for the MAS-Seq for 10x Single Cell 3’ kit by PacBio.
-
bioRxiv - Genomics 2021Quote: ... and 16 genomes from NCBI (10 of which were sequenced by PacBio). Raw reads of Illumina sequencing were assembled using Skesa v2.4.0 [22].
-
bioRxiv - Microbiology 2024Quote: ... 2 µL of 10 µM 5’ PacBio round 2 forward primer (PacBio_5pri_RND2), 2 µL of 10 µM 3’ PacBio round 2 reverse primer (PacBio_3pri_RND2) ...
-
bioRxiv - Genomics 2019Quote: ... (Large insertions and deletions are defined to be greater than or equal to 3 nts for Illumina data or greater than or equal to 5 nts for PacBio data ...
-
bioRxiv - Molecular Biology 2020Quote: ... The mean mapping difference between all of the query reads and the sub UMI was ≤ 3.5 (Nanopore only) or ≤ 3 (PacBio only). D ...
-
bioRxiv - Genomics 2019Quote: PacBio 10 kb CCS reads (ftp://ftp-trace.ncbi.nlm.nih.gov/giab/ftp/data/AshkenazimTrio/HG002_NA24385_son/PacBio_CCS_10kb/) were aligned to hs37d5 with minimap2 version 2.11-r797 (https://github.com/lh3/minimap2) ...
-
bioRxiv - Genetics 2022Quote: ... we de novo assembled the genomes of 10 samples in this study sequenced by PacBio HiFi reads and then extracted NRSs (Table S3) ...
-
bioRxiv - Cancer Biology 2024Quote: The following section of the sequencing preparation was completed using kit components from the MAS-Seq for 10x Single Cell 3’ kit (PacBio, cat. no. 102-659-600), as well as individually created oligos ...
-
bioRxiv - Cancer Biology 2024Quote: The following section of the sequencing preparation was completed using kit components from the MAS-Seq for 10x Single Cell 3’ kit (PacBio, cat. no. 102-659-600), as well as individually created oligos ...
-
bioRxiv - Evolutionary Biology 2023Quote: A subsample of 10 individuals was selected for a complementary R gene analysis using Pacific Biosciences (PacBio) long-read sequencing ...
-
bioRxiv - Microbiology 2020Quote: ... 10 and 15 (99, 99.9 and 99.95 base call accuracy, respectively. Nanopore and PacBio (raw and CCS reads) were assembled using the following assemblers ...
-
bioRxiv - Genomics 2023Quote: ... The size selected and purified >10 kbp fraction of libraries were used for sequencing on Sequel II (Pacbio).
-
bioRxiv - Genomics 2023Quote: ... and 76 Gbp of data (24.4x coverage) in 10 kbp libraries (NCBI SRA Accession: SRX5633451) were generated from PACBIO_SMRT (Sequel II ...
-
bioRxiv - Genomics 2024Quote: ... Four generations of full-sib matings were carried out to produce the genomic strain SaPa_ori_Rep25-2-1-1 (“Sapa_PacBio”). Fly strains were maintained at room temperature on standard cornmeal food provided by the UC Davis Fly Kitchen with filter paper for environment structure and pupariation substrate.
-
bioRxiv - Genomics 2022Quote: The absolute quantity of DNA-m6A in S2 cell nuclei treated with 20 U of Hia5 for 10 min was determined using Pacific Biosciences (PacBio) Circular consensus sequencing ...
-
bioRxiv - Genomics 2023Quote: ... The size-selected libraries were prepared for loading following the instructions generated by the SMRT Link software (PacBio, version 10) and the ‘HiFi Reads’ application ...