Labshake search
Citations for Zymo Research :
1 - 50 of 893 citations for 7 Bromo 5 fluoro 3 methyl 1H indole since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Microbiology 2020Quote: ... Strains carrying the pLacZ plasmid appear blue when plated on 0.008% X-gal (5-bromo-4-chloro-3-indolyl β-D-galactopyranoside) (Zymo Research, CA, USA). X-gal concentrations above 0.008% appear to inhibit growth of S ...
-
bioRxiv - Genomics 2024Quote: Pico Methyl-Seq Library Prep Kit (Zymo research) was used for making WGBS libraries basically as manufacturer’s instruction ...
-
bioRxiv - Genomics 2022Quote: ... at 37°C for 1h and purified by Zymo columns ...
-
bioRxiv - Molecular Biology 2021Quote: ... 10 μl RNA from total or immunopurified ribosomes were 3’ dephosphorylated and 5’ phosphorylated as described above 30 and was selectively recovered with RNA Clean and Concentrator-5 (Zymo) according to the manufacturer’s instructions ...
-
bioRxiv - Molecular Biology 2019Quote: PBAT libraries were prepared using Pico Methyl-Seq Library Prep Kits (Zymo D5456). Sperm and egg isolates of approximately 100 cells each were diluted in 200 ul of 10 mM Tris ...
-
bioRxiv - Plant Biology 2023Quote: ... libraries were prepared with the Pico Methyl-Seq prep kit (Zymo Research #D5456) and sequenced by the Next Generation Sequencing Facility (Vienna BioCenter Core Facility ...
-
bioRxiv - Plant Biology 2022Quote: ... libraries were prepared with the Pico Methyl-Seq Library Prep Kit (Zymo Research #D5456) and sequenced by the next Generation Sequencing Facility (Vienna BioCenter Core Facilities) ...
-
bioRxiv - Cancer Biology 2022Quote: ... WGBS libraries were generated using the Pico Methyl-Seq Library Prep Kit (Zymo Research) with the following modifications ...
-
bioRxiv - Molecular Biology 2024Quote: ... WGBS libraries were generated using the Pico Methyl-Seq Library Prep Kit (Zymo Research) according to the manufacturer’s instructions ...
-
bioRxiv - Genomics 2020Quote: ... amplification and library construction procedures were performed with Pico Methyl-SeqTM Library Prep Kit (Zymo Research) following the manufacturer’s instruction ...
-
bioRxiv - Immunology 2022Quote: ... Libraries for Illumina-based sequencing were prepared with the Pico Methyl-Seq Library Prep Kit (Zymo Research) using Illumina TruSeq DNA methylation indices ...
-
bioRxiv - Neuroscience 2023Quote: Sorted nuclei DNA on beads were processed by Pico Methyl-Seq Library Prep Kit (Zymo Research, D5455) to generate bisulfite sequencing libraries ...
-
bioRxiv - Neuroscience 2019Quote: ... Methylation-sensitive restriction enzyme-dependent methylation analysis was performed using OneStep q-Methyl Kit (Zymo, Irvine, CA, USA) following the instructions given in the manual using 20ng DNA for each sample ...
-
bioRxiv - Plant Biology 2021Quote: ... Bisulfite converted DNA was used to build libraries with the Pico Methyl-Seq library kit (Zymo Research, D5455). 7 cycles of amplification was used for library construction ...
-
bioRxiv - Microbiology 2020Quote: ... and mRFP1 was PCR amplified using primers listed in Table 3 and purified using DNA Clean and Concentrator-5 kit (Zymo Research). pUC19 was digested with PstI and pBAD18 was digested with EcoRI and HindIII ...
-
bioRxiv - Developmental Biology 2020Quote: RNA was extracted from at least two biological replicates for each sample of cells at days 3 and 5 of differentiation using Direct-zol RNA extraction kit (Zymo Research). mRNA was captured using NEBNext (Poly A ...
-
bioRxiv - Cancer Biology 2023Quote: ... change of reverse transcription primers for compatibility with standard Illumina sequencing primers 3) cDNA clean-up prior to library amplification performed with the DNA Clean & Concentrator-5 kit (Zymo, #D4013) 4 ...
-
bioRxiv - Genomics 2020Quote: ... We created libraries from bisulfite-converted single stranded DNA using the Pico Methyl-Seq Library Prep Kit (Zymo Research), which were then pooled for sequencing on an Illumina NextSeq 500 instrument using the NextSeq 500/550 V2 High Output reagent kit (1 × 75 cycles ...
-
bioRxiv - Molecular Biology 2021Quote: ... to block the 3’-ends from ligation and were then size-selected to 200 ≥ nt (DNA Clean & Concentrator™-5, Zymo Research). 5’ adaptors were attached using T4 RNA ligase (Ambion ...
-
bioRxiv - Genetics 2023Quote: ... Cells were cultured for 3-5 days post-transfection after which genomic DNA was extracted using the Quick-DNA Microprep Kit (Zymo Research Corporation).
-
bioRxiv - Genetics 2023Quote: ... 30 samples were collected (5 timepoints x 2 genotypes x 3 replicates) and RNA was extracted using a Direct-zol RNA Miniprep (Zymo Research R2061) using TRIzol Reagent (ThermoFisher Cat # 15596026 ...
-
bioRxiv - Physiology 2024Quote: ... repeat 3-5 times on ice) and total RNA was extracted following the instructions of the Quick-RNA MiniPrep kit (Zymo Research, R1055) and reverse transcription was performed by SuperScript™ III (18080093 ...
-
bioRxiv - Physiology 2023Quote: ... repeat 3-5 times on ice) and total RNA was extracted following the instructions of the Quick- RNA MiniPrep kit (Zymo Research, R1055) and reverse transcription was performed by SuperScript™ III (18080093 ...
-
bioRxiv - Neuroscience 2019Quote: ... The whole genome bisulfite sequencing (WGBS) libraries were prepared using Pico Methyl-seq library prep kit (Cat# D5456, Zymo research). Paired-end ...
-
bioRxiv - Immunology 2020Quote: ... WGBS libraries were prepared using 100 ng of DNA using the Pico Methyl-Seq™ Library Prep Kit (Zymo Research) according to the manufacturer’s protocol ...
-
bioRxiv - Genomics 2021Quote: ... Genomic DNA libraries were prepared genomic DNA (10 ng) using a Pico Methyl-Seq Library Prep Kit (ZYMO, catalog # D5456). MQ beads (Epigentik ...
-
bioRxiv - Microbiology 2020Quote: ... and 7) ZymoBIOMICS™ DNA Microprep kit (Zymo Research, California, USA) with modifications ...
-
bioRxiv - Immunology 2020Quote: ... the DNA was subjected to bisulfite conversion and PCR-based sequencing adapter tagging as described for WGBS above (Pico Methyl-Seq Library Prep Kit, Zymo Research). The library was quantified and sequenced on an Illumina Nextseq 550 ...
-
bioRxiv - Genetics 2020Quote: ... We then prepared whole-genome bisulphite sequencing libraries from each DNA sample using the Pico Methyl-Seq Library Prep Kit (Zymo Research), according to the manufacturer’s protocol (see Supplementary Table 1 for detailed sample metadata and sequence accession codes) ...
-
bioRxiv - Bioengineering 2024Quote: ... 1 mL of suspended biomass was collected in triplicate from the mixed tank and PBR effluent and stored in 5 mL polypropylene transport tubes (FisherbrandTM, USA) prefilled with 3 mL DNA/RNA ShieldTM (Zymo Research corp., CA, USA). The samples were briefly vortexed and stored at -20 °C until they were shipped to University at Buffalo (UB ...
-
bioRxiv - Cell Biology 2024Quote: ... Samples were then treated with Turbo DNAse 2 to 3 times and then purified with the RNA Clean and Concentrator-5 Kit (Zymo Research Cat#: 11-325) according to the manufacturer’s instructions ...
-
bioRxiv - Cell Biology 2024Quote: ... 5-Fluoroorotic acid (5-FOA; ZYMO RESEARCH F9003), or doxycycline (Sigma D9891) ...
-
bioRxiv - Systems Biology 2022Quote: ... the second sample was stored at RT for 3 – 5 days and the third sample was collected in a Zymo research tube (Zymo Research Inc., Irvine, CA, USA) containing 9ml DNA/RNA shield and stored at RT for 3 – 5 days before storage at −80 °C ...
-
bioRxiv - Bioengineering 2021Quote: ... Selection for pyrF mutations was performed with 5-fluoroorotic acid (5-FOA, Zymo Research, part number F9001-5) at a final concentration of 0.5 mg/ml ...
-
bioRxiv - Molecular Biology 2020Quote: ... the shuffle strain transformed with plasmid expressing mutant ribosomal protein products was grown on SDC plates containing 0.5 mg/mL 5-fluoroorotic acid (5-FOA, #F9001-5, Zymo Research) and a strain lacking URA3 was isolated.
-
bioRxiv - Plant Biology 2023Quote: ... Relative quantification of 5-methylcytosine (5-mC) over time was determined using the 5-mC DNA ELISA Kit (Zymo Research), using 100 ng of genomic DNA per sample as input ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... age-matched (7-10 days post eclosion adults) using Zymo Quick-DNA extraction kit (Zymo D3012). The 16S V1-V2 region was amplified ...
-
bioRxiv - Developmental Biology 2019Quote: Total RNA was extracted from 7-day old gemmae using Direct-Zol RNA MINIprep kit (Zymo Research) following manufactures instructions ...
-
bioRxiv - Cancer Biology 2022Quote: ... was used for the estimation of global 5-hmC and 5-mC levels by ELISA using the Quest 5-hmC ELISA kit and the 5-mC DNA ELISA kit (Zymo research Inc, USA) according to the manufacturer’s instructions.
-
bioRxiv - Neuroscience 2023Quote: OE from 3 controls and 3 sFlt1 mice was dissected and immediately placed in RNA lysis buffer (Zymo Research R1051) without vortexing for 5min and further processed according to manufacturer’s guidelines ...
-
bioRxiv - Evolutionary Biology 2020Quote: Total RNA from six whole 20-21 dpf offspring (3 control offspring, 3 treatment offspring) was extracted using a Zymo Duet extraction kit (Zymo, NZ). The integrity of RNA samples was determined using an Agilent RNA 6000 Nano chip on an Agilent 2100 Bioanalyzer to check that the samples had an RNA Integrity Number (RIN ...
-
bioRxiv - Biochemistry 2023Quote: ... or a combination of TRIzol and the RNA Clean & Concentrator-5 (RCC-5) kit (Zymo Research), according to the Zymo instructions for combination Trizol/Zymo-Spin-Column RNA isolation ...
-
bioRxiv - Systems Biology 2023Quote: ... 600 µL DNA/RNA wash buffer (Zymo, #D7010-3), and 400 µL DNA/RNA wash buffer ...
-
bioRxiv - Genomics 2024Quote: Neutralization Buffer (Zymo Research, cat. no. D4027-3-50)
-
bioRxiv - Evolutionary Biology 2021Quote: ... 0.075% 5-fluorooritic acid (Zymo Research)) ...
-
bioRxiv - Genomics 2020Quote: ... We verified the presence of high molecular weight DNA products in the samples before purifying nucleic acids by Zymo DNA Clean & Concentrator-5 (ZYMO Research).
-
bioRxiv - Synthetic Biology 2020Quote: ... and DCC-5 columns (Zymo Research). The sublibraries were pooled and sequenced on a single lane of a HiSeq4000 (Illumina) ...
-
bioRxiv - Genomics 2020Quote: ... and then the fragmented DNAs were purified with DNA Clean & Concentrator-5 Kit (Zymo Research, DCC-5) according to the manufacturer’s protocol ...
-
bioRxiv - Genomics 2020Quote: ... 7) We verified the presence of high molecular weight DNA products in the samples before purifying nucleic acids by Zymo DNA Clean & Concentrator-5 (ZYMO Research).
-
bioRxiv - Synthetic Biology 2021Quote: ... the cell suspension was mixed with 5 µl of 5 U/μl Zymolyase (Zymo Research, catalog no. E1005) and incubated for 1 h at 37°C with agitation ...