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Citations for Akoya Biosciences :
1 - 50 of 61 citations for Dengue Virus Serotype 2 NS1 Protein Insect Cells since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Developmental Biology 2023Quote: ... The probes were for Mus musculus Fgf10 (channel 2, 446371) and Wnt5a (channel 2, 316791) and the fluorophores were Opal Polaris 520 and Opal 620 (Akoya Biosciences FP1487001KT and FP1495001KT) ...
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bioRxiv - Cancer Biology 2022Quote: ... 6-diamidino-2-phenylindole (Spectral DAPI, Akoya Biosciences) was applied per provided protocols to label nuclei ...
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bioRxiv - Systems Biology 2023Quote: ... 6-diamidino-2-phenylindole (Spectral DAPI, Akoya Biosciences) was applied per provided protocols to label nuclei ...
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bioRxiv - Immunology 2021Quote: ... protein blocking in Akoya Antibody Diluent/Block (Akoya biosciences, MA) took place for 10 minutes ...
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bioRxiv - Cancer Biology 2023Quote: ... Protein blocking was performed using antibody diluent/blocking buffer (Akoya, ARD1001EA) for 10 minutes at room temperature ...
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bioRxiv - Cancer Biology 2022Quote: Stained coverslips were mounted onto the CODEX stage plate version 2 (Akoya) and secured onto the stage of a BZ-X810 inverted fluorescence microscope (Keyence) ...
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bioRxiv - Cancer Biology 2021Quote: ... the slides were counterstained with 4’,6-diamidino-2-phenylindole (DAPI, Akoya Biosciences) and coverslipped using ProLong Gold antifade mounting media (Thermo Fisher Scientific) ...
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bioRxiv - Pathology 2021Quote: IHC tissues were imaged with a Mantra 2 Quantitative Pathology Workstation (Akoya Biosciences) with a 20x objective ...
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bioRxiv - Cancer Biology 2023Quote: ... 2x for 2 min and incubated in CODEX staining buffer (Akoya Biosciences, 232106) for 20 min ...
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bioRxiv - Immunology 2023Quote: ... CDKN1A (channel 2; ACD 311401-C2) conjugated to Opal Polaris 780 (Akoya FP1501001KT), and IL1B (channel 4 ...
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bioRxiv - Neuroscience 2023Quote: ... assay # 2: VIP expression was identified by Opal 520 (Akoya Bioscience, catalog # FP1487001KT), CCK expression was identified by Opal 570 (Akoya Bioscience ...
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bioRxiv - Immunology 2023Quote: ... The nuclei were stained with spectral DAPI (4,6-diamidino-2-phenylindole) solution (Akoya Biosciences). Finally ...
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bioRxiv - Immunology 2022Quote: ... was stained with 6 protein markers (Figure 4A) and captured with PhenoImager® imaging system (Akoya Biosciences). Over 15,000 cell type annotations from 35 training set slides were used as a training set ...
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bioRxiv - Systems Biology 2023Quote: ... Proximal protein biotinylation occurs with treatment of H2O2 and tyramide-biotin (TSA Biotin System, Akoya Bioscience NEL700A001KT), resulting in tyramide-biotin radicalization and covalent deposition onto proximal proteins ...
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bioRxiv - Cancer Biology 2022Quote: ... tissue slides were exposed to multiple staining cycles each including a 30 minute incubation with a protein block (Akoya), 1 hour incubation with the respective primary antibody ...
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bioRxiv - Cancer Biology 2022Quote: ... tissue slides were exposed to multiple staining cycles each including a 30 minute incubation with a protein block (Akoya), 1 hour incubation with the respective primary antibody ...
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bioRxiv - Cancer Biology 2022Quote: ... The tissue was then allowed to dry for 2 minutes and hydrated in hydration buffer (Akoya Biosciences) twice for 2 minutes ...
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bioRxiv - Neuroscience 2022Quote: ... washed again (2 x 5 min) and incubated with OPAL 650 Tyramide (Akoya Biosciences, FP1496001KT, 1:500) for 10 minutes ...
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bioRxiv - Developmental Biology 2023Quote: ... and SARS-CoV-2 spike mRNA with TSA Plus CY5 (1:1500, #NEL745001KT, Akoya Biosciences, MA, USA). Fluorescent images were acquired with NanoString GeoMX DSP at 20×.
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bioRxiv - Cancer Biology 2023Quote: ... The flow cell (Akoya Biosciences, #240204) was assembled onto the slide as described in the user guide ...
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bioRxiv - Immunology 2022Quote: ... several steps are carried out in order to amplify the IL-22BP signal: polymer enhancer (M023 from ImPath) then HRP-2 (M024 from ImPath) and finally Opal 650 (FP1496A from Akoya) following manufacturer’s instruction ...
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bioRxiv - Pathology 2023Quote: ... Spatial co-localization of CD34 and fibrinogen was carried out using the 2-color IHC images obtained with the Mantra 2.0 microscope (Akoya Biosciences) with spectral unmixing using Inform software ...
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bioRxiv - Cancer Biology 2023Quote: ... Slides were blocked with 10% BSA + 0.05% Tween 20 and the antibodies listed in Supplementary Table 4 were diluted in 2% BSA in 0.05% PBST and used in a multiplexed manner using the OPAL reagents (Akoya Biosciences). Briefly ...
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bioRxiv - Cancer Biology 2023Quote: ... Slides were then blocked with 10% BSA + 0.05% Tween20 and the antibodies were diluted in 2% BSA in 0.05% PBST and used in a multiplexed manner with OPAL reagents (Akoya Biosciences). All primary antibodies (described above for western blotting ...
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bioRxiv - Cancer Biology 2023Quote: ... Slides were then blocked with 10% BSA + 0.05% Tween20 and the antibodies were diluted in 2% BSA in 0.05% PBST and used in a multiplexed manner with OPAL reagents (Akoya Biosciences). All primary antibodies were incubated overnight at 4 °C ...
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bioRxiv - Neuroscience 2024Quote: ... after which the hybridized probes were detected using peroxidase conjugated anti-FLU or anti-DIG Fab(2) fragments and the Tyramide signal amplification (TSA) system from Akoya Biosciences ...
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bioRxiv - Cancer Biology 2024Quote: ... Slides were then incubated with HRP conjugated goat anti rabbit (1:100, Table S1) diluted 2% NHS for 1.5hr followed by OPAL 570 (1:500, Akoya FP1488001KT) reagent incubation for 15 min ...
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bioRxiv - Cancer Biology 2024Quote: ... Slides were then incubated with HRP conjugated goat anti rabbit (1:100, Table S1) diluted 2% NHS for 1.5hr followed by OPAL 650 (1:500, Akoya FP1496001KT) reagent incubation for 15 min ...
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bioRxiv - Neuroscience 2022Quote: ... sections were incubated for 2hr with HRP-conjugated anti-mouse IgG diluted at 1:300 and followed by 1 hr incubation of TSA plus Cyanine-2 (1:300; cat#NEL745001KT, Akoya Biosciences). Sections were counterstained with DAPI and mounted on slides with CC/Mount mounting medium (cat# C9368 ...
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bioRxiv - Bioengineering 2022Quote: ... The fluorescent Opal 570 dye was added to channel 2 containing SLC17A7-C2 (excitation: 550 nm, emission: 570 nm; Akoya Biosciences). DAPI was added in the final step to spheroids for 30-sec ...
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bioRxiv - Developmental Biology 2024Quote: ... embryos were washed for 2 days at 4◦C and then incubated for 5 minutes with TSA Cyanine 5 at room temperature (NEL705A001, Akoya, biosciences). All embryos were nuclei stained with DAPI 1:1000 diluted in PBS ...
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bioRxiv - Cancer Biology 2023Quote: ... Slides were then rinsed through two rounds of incubation in distilled water for 2 minutes and stored in Hydration Buffer from the PhenoCycler Staining Kit (Akoya Biosciences, MA, #7000008) until ready for staining.
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bioRxiv - Cancer Biology 2021Quote: ... cells were incubated with spectral DAPI (Akoya Biosciences, cat #SKU FP1490), for 5 minutes ...
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bioRxiv - Cancer Biology 2021Quote: ... All images were analyzed using inForm Cell Analysis software (Akoya Biosciences). Sixty-three images of encompassing the 26 different control and experimental slides were batched analyzed after using a mouse formulated library consisting of each single TSA fluorophore listed above ...
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bioRxiv - Cancer Biology 2023Quote: ... images were analyzed using inForm® Cell Analysis™ software (Akoya Biosciences).
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bioRxiv - Developmental Biology 2023Quote: A manual cell classification was performed in CODEX MAV 1.5 (Akoya Biosciences). Annotation of the macrophage clusters was done using the same gating strategy as in flow cytometry ...
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bioRxiv - Cancer Biology 2020Quote: ... Spectral unmixing and cell phenotype identification was performed using inForm software (Akoya Biosciences). Digital immune phenotype plots were created by assembling xy data from identified cell phenotypes in individual tile scans into a whole biopsy composite using ggplot ...
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bioRxiv - Immunology 2021Quote: ... Cells were quantified in a blinded manner using the inForm Software (Akoya Biosciences).
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bioRxiv - Immunology 2023Quote: ... Mixed RNAscope (Advanced Cell Diagnostics)/antibody antigen retrieval and staining with Opal (Akoya Biosciences) fluorophores was performed manually following the RNAscope Multiplex Fluorescent v2 Assay combined with the immunofluorescence protocol (322818-TN ...
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Cell Ecosystem and Signaling Pathways of Primary and Metastatic Pediatric Posterior Fossa EpendymomabioRxiv - Cancer Biology 2020Quote: ... The LGR5 probe (311021, Advanced Cell Diagnostics) was detected using Opal 520 (FP1487001KT, Akoya Biosciences) at a 1:1500 dilution ...
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bioRxiv - Cancer Biology 2021Quote: Supervised machine learning algorithms were applied for tissue and cell segmentation (inForm 2.4.1, Akoya Biosciences). Single-cell-level imaging data were exported and further processed and analyzed using R (v3.6.2) ...
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bioRxiv - Developmental Biology 2021Quote: ... with probe for human TINAGL1(Advanced Cell Diagnostics #857221-C2) and OPAL 570 fluorophore (Akoya #FP1488001KT), following the manufacturer’s protocol.
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bioRxiv - Cell Biology 2021Quote: ... Mouse (Cat. No. 468281; Advanced Cell Diagnostics) and Opal 690 Dye (Cat. No. FP1497001KT; Akoya BioSciences) were used according to the manufacturer’s instructions for fluorescence in-situ hybridization ...
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bioRxiv - Cancer Biology 2023Quote: Cell numbers of myeloid subsets were estimated with object module of InForm Tissue Analysis Software (AKOYA). Myeloid response score was determined as described previously65,108 ...
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bioRxiv - Immunology 2022Quote: ... Cell classification to detect alveolar macrophages and other mononuclear phagocytes was performed in CODEX MAV (Akoya Biosciences), following a similar gating scheme as the one used for flow cytometry.
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bioRxiv - Cancer Biology 2022Quote: ... anti-ER (Cell Marque, 249-R-15-ASR, clone: SP1, 1:70 dilution) with Opal 650 (Akoya Biosciences ...
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bioRxiv - Cell Biology 2024Quote: ... The ER was then visualized incubating the cells using fluorescent tyramide (TSA-FITC 1:200, AKOYA Biosciences), 0.003 H202 and 0,05% Tween-20 in 100 mM borate buffer ...
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bioRxiv - Immunology 2021Quote: ... the RNAScope multiplex fluorescent kit V2 (Advanced Cell Diagnostics) was used with the opal fluorophores system (Akoya Bioscience) according to the manufacturer’s instructions and as described previously66 with some modifications ...
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bioRxiv - Microbiology 2023Quote: ... and analyzed for several immune cell populations using the inForm® tissue Finder (Version 2.4.8) and PhenochartTM (Version 1.0.12) software (Akoya Biosciences).
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bioRxiv - Cancer Biology 2023Quote: ... The slide was then transferred to the flow cell carrier and imaged on a PhenoCycler-Fusion (Akoya Biosciences, MA) using the following exposure settings ...