Labshake search
Citations for Diagenode :
201 - 250 of 273 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Genetics 2024Quote: ... ChIP was carried out using the iDeal ChIP-seq kit for Transcription Factors (C01010055, Diagenode, Liege, Belgium), following the provided protocol ...
-
bioRxiv - Developmental Biology 2021Quote: ... snap frozen and stored at −80 °C or further processed using iDeal ChIP for Transcriptional Factors Kit (Diagenode) (Cat ...
-
bioRxiv - Developmental Biology 2022Quote: Reduced Representation Bisulfite Sequencing (RRBS) libraries were prepared using Diagenode’s Premium RRBS Kit (catalog #C02030032, Diagenode, Denville, NJ). Due to the occurance of CHG methylation in plant genomes ...
-
bioRxiv - Genomics 2020Quote: Preparation of reagents: ChIP Wash buffers 1 to 4 (from iDeal ChIP-seq kit for histones, Diagenode C01010173) are aliquoted into quarter module reservoirs divided by length ...
-
bioRxiv - Molecular Biology 2021Quote: ... Cross-linking was reversed at 65°C overnight and immunoprecipitated DNA was recovered using the IPure Kit (Diagenode). Genomic regions of interest were identified by realtime PCR (qPCR ...
-
bioRxiv - Molecular Biology 2021Quote: MeDIP was performed using the Auto MeDIP Kit on an automated platform SX-8G IP–Star Compact (Diagenode). Briefly ...
-
bioRxiv - Developmental Biology 2022Quote: ... Fragmented cDNA was used as input for library preparation with MicroPlex Library Preparation Kit v2 (Diagenode, cat. C05010012) and processed according to the manufacturer’s instruction ...
-
bioRxiv - Genomics 2021Quote: Illumina libraries were constructed with primer indices provided by the Auto-Chipmentation kit for histones (Diagenode,cat. C01011000), according to the protocols supplied ...
-
bioRxiv - Immunology 2023Quote: Anti H3K9ac ChIP-seq were performed using using the iDeal ChIP-seq kit for Histones (Diagenode, Cat.#C01010059) and NEBNext® UltraTM II DNA Library Prep Kit for Illumina® (NEB ...
-
bioRxiv - Cancer Biology 2024Quote: Chromatin immunoprecipitation experiments were carried out using the Ideal ChIP-seq Kit for Transcription Factors or Histones (Diagenode) as per the manufacturer’s protocol ...
-
bioRxiv - Developmental Biology 2023Quote: ... Fragmented cDNA was used as input for library preparation with MicroPlex Library Preparation Kit v2 (Diagenode, cat. C05010012) and processed according to the manufacturer’s instruction ...
-
bioRxiv - Molecular Biology 2023Quote: Chromatin-immunoprecipitation (ChIP) for ChIP-qPCR was performed according to the One-day ChIP kit protocol (Diagenode; C01010080). Beads were exchanged to Dynabeads™ Protein A (Thermo Fisher Scientific ...
-
bioRxiv - Genomics 2023Quote: MeDIP was performed using the Auto MeDIP Kit on an automated platform SX-8G IP–Star Compact (Diagenode). Briefly ...
-
bioRxiv - Molecular Biology 2023Quote: Chromatin immunoprecipitation (ChIP) for ChIP-qPCR was performed according to the one-day ChIP kit protocol (Diagenode; C01010080). For each ChIP ...
-
bioRxiv - Neuroscience 2024Quote: ... Fragmented cDNA was used as input for library preparation with MicroPlex Library Preparation Kit v2 (Diagenode, cat. C05010012) and processed according to the manufacturer’s instruction ...
-
bioRxiv - Cancer Biology 2024Quote: ... Libraries were prepared manually from input and ChIP’d DNA using MicroPlex Library Preparation Kit v3 /96 rxns (Diagenode) with 96 Unique Dual Indexes for MicroPlex v3 -Set I and Set II (Diagenode) ...
-
bioRxiv - Genetics 2021Quote: ... ONT libraries were prepared using the EXP-NBD103 and SQK-LSK109 kits according to the manufacturer’s instructions and using 4 µg of 40Kb sheared DNA (Megaruptor, Diagenode) as input ...
-
bioRxiv - Genomics 2021Quote: ... Cells were lysed in two steps with the Diagenode iDeal ChIP-seq kit for transcription factors (Diagenode, Seraing, Belgium).
-
bioRxiv - Genomics 2021Quote: ... 8 µg of adequately sheared chromatin was subjected to immunoprecipitation using iDeal ChIP-seq kit for Histones (Diagenode, C01010050) with 2 µg of antibodies against histone modifications or 10 µg of custom RPB1 antibody ...
-
bioRxiv - Developmental Biology 2022Quote: ... One hundred fifty microliters of Hank’s buffered salt solution with 1x protease inhibitor cocktail (in True MicroChIP kit, Diagenode) was added ...
-
bioRxiv - Genomics 2021Quote: ... Libraries were prepared from 10 ng of double-stranded purified DNA using the MicroPlex Library Preparation kit v2 (Diagenode) following the manufacturer’s protocol with some modifications ...
-
bioRxiv - Genomics 2021Quote: ... Global DNA methylation profiling was generated with the Infinium MethylationEPIC BeadChip Kit (Queensland University of Technology and Diagenode, Austria). The first batch contained only males and were randomized for timepoint and age ...
-
bioRxiv - Pathology 2022Quote: ... library was prepared using the EXP-NBD103 and SQK-LSK108 kits according to the manufacturer’s instructions and starting with 3 μg of 20 kb sheared DNA (Megaruptor, Diagenode) as input ...
-
bioRxiv - Microbiology 2022Quote: ... July 2020 release using the SMRTbell Express Template Prep Kit v2.0 with the following modifications: genomic DNA was sheared using Speed 34 on the Megaruptor 3 (Diagenode) and an additional size selection step of 6-50kb fragments on the Blue Pippin (Sage Science ...
-
bioRxiv - Genomics 2023Quote: ... 25 ng of RNA in 8 µL water was input to the D-Plex Small RNA kit (Diagenode, C0503000) and libraries were prepared according to the manufacturer recommendations with the exception that 9 cycles of PCR were carried out ...
-
bioRxiv - Plant Biology 2023Quote: ... rRNA depleted RPFs were directly used as input for the D-plex small RNA-seq kit (Diagenode cat#C05030001), according to manufacturer’s instructions ...
-
bioRxiv - Cell Biology 2024Quote: ... and chromatin was purified and sonicated using buffers and protocols from the IDeal ChIP-Seq Histone Kit (Diagenode, C01010051). Sonication was conducted with the Bioruptor® Pico sonication device (Diagenode ...
-
bioRxiv - Molecular Biology 2024Quote: ... Then, 25μl of 2x NEB Next High Fidelity (Cat# M0544S, Lot-10180442) and 5μl MgCl2 (from Diagenode ChIPmentation kit) were added ...
-
bioRxiv - Genomics 2024Quote: Long-read sequencing was facilitated by fragmenting genomic DNA using the Megaruptor 3 shearing kit (Diagenode SA, Seraing, Belgium). Fragments less than 5 kb were selectively removed using the AMPure PB beads size selection kit (Pacbio ...
-
bioRxiv - Developmental Biology 2020Quote: ... the bisulfite conversion ratio was calculated using spike-in controls provided by Premium Reduced Representation Bisulfite Sequencing (RRBS) Kit (Diagenode) (supplementary Table S2 ...
-
bioRxiv - Developmental Biology 2020Quote: ... samples were sent to the Genomics Unit of the Centre for Genomic Regulation (PRBB, Barcelona) where RRBS libraries were prepared using the Premium Reduced Representation Bisulfite Sequencing (RRBS) Kit (Diagenode), and sequenced ton an Illumina HiSeq 2000 platform in 50-bp single-end mode ...
-
bioRxiv - Genetics 2020Quote: ... 50ng of immunoprecipitated DNA or input sample were used to prepare sequencing libraries using the iDeal Library Preparation kit (Diagenode), according to manufacturer instructions ...
-
bioRxiv - Cancer Biology 2022Quote: Tumour samples with optimal chromatin fragment size (200-500 bp) were immunoprecipitated using the iDeal ChIP-seq Kit for Histones (Diagenode). Magnetic immunoprecipitation of sheared DNA-chromatin complexes (500ng ...
-
bioRxiv - Developmental Biology 2022Quote: ... in VFG media for 10 minutes at room temperature followed by a 5-minute quench with glycine (in True MicroChIP kit, Diagenode) at room temperature ...
-
bioRxiv - Cancer Biology 2021Quote: H3K27ac chromatin immunoprecipitation (ChIP) experiments were performed as previously described12 using the iDeal ChIP-seq kit for histones (Cat# C01010171, Diagenode) and the H3K27ac rabbit polyclonal antibody (Abcam Cat# ab4729 ...
-
bioRxiv - Immunology 2021Quote: ... Chromatin was prepared from 40–50 million cells using Diagenode Chromatin shearing optimization kit (Cat no. C01010055) and further subjected to sonication using Bioruptor sonicator (Diagenode) to obtain chromatin fragments of 100–500 bps ...
-
bioRxiv - Genomics 2021Quote: ... ChIP-seq for H3K4me3 and H3K27ac in PEER cell line was generated using MicroPlex Library Preparation Kit (Diagenode, Liege, Belgium) according to the BLUEPRINT protocol (http://dcc.blueprint-epigenome.eu/#/md/methods) ...
-
bioRxiv - Genetics 2020Quote: ... 500 ng of each sample was converted into a sequencing-ready library using the CATS RNA-seq kit with rRNA depletion (Diagenode). The RNA integrity ...
-
bioRxiv - Plant Biology 2022Quote: ... 250 pg of immunoprecipitated (IP) or genomic (INPUT) DNA were used to prepare libraries with the MicroPlex Library Preparation kit v2 (Diagenode). Quality of libraries was validated using Agilent / Advanced Analytical fragment analyzer ...
-
bioRxiv - Microbiology 2023Quote: ... chromatin-antibody complexes were washed and eluted from the beads using the iDeal ChIP-seq kit for transcription factors (Diagenode) according to the manufacturer’s protocol ...
-
bioRxiv - Cell Biology 2023Quote: ... DNA was purified as for ChIP-seq samples following the Diagenode iPure protocol using reagents from the Auto iDeal ChIP-seq kit (Diagenode). DNA quantification ...
-
bioRxiv - Cell Biology 2023Quote: HUVEC and HUAEC cells that were subjected to ChIP were transduced with lentiviral vectors for 72-96 h before being processed using iDeal ChIP-seq kit for Transcription factors (Diagenode), according to the manufacturers protocol with modifications ...
-
bioRxiv - Neuroscience 2023Quote: ... and 8 μl was used for small RNA libraries construction by the D-Plex Small RNA-seq Kit (Diagenode C05030001). Indexes were attached using the D-Plex Single Indexes for Illumina - Set A (Diagenode C05030010 ...
-
bioRxiv - Genomics 2023Quote: ... The immunoprecipitated DNA and 1% of the total input were reverse-crosslinked and eluted using the iPure v2 kit (Diagenode). For library preparation ...
-
bioRxiv - Molecular Biology 2023Quote: Libraries were then prepared from 10 ng of RPFs using the D-Plex Small RNA-Seq kit for Illumina (Diagenode) and the D-Plex Unique Dual Indexes for Illumina – set A (Diagenode) ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... Several libraries were constructed using the Ligation Sequencing Kit (Nanopore LSK109) using DNA sheared to different size using a megaRuptor (Diagenode) to optimise yield and contiguity ...
-
bioRxiv - Molecular Biology 2024Quote: ... The sequencing libraries were generated using the Diagenode small RNA sequencing kit following the manufacturer’s protocol (Diagenode, Cat. No. C05030001). The libraries were sequenced on a NovaSeq6000 system (Illumina).
-
bioRxiv - Genomics 2024Quote: ... The DNA was quantified using Qubit and the fragment length was assessed with the Fragment Analyzer (HS large fragment kit) and then sheared to a length of 24 kb using the Megaruptor 3 (Diagenode) (45/200/30) ...
-
bioRxiv - Genetics 2024Quote: ... We sheared the high molecular weight (HMW) DNA to achieve consistent and narrow size ranges to 20kb using the Megaruptor 3 Shearing kit (E07010003, Diagenode). Megaruptor 3 was performed using customized settings ...
-
bioRxiv - Cancer Biology 2024Quote: For library preparation from ChIP-fragments the MicroPlex Library Preparation Kit v3 was used along with ‘24 UDI for MicroPlex v3 - Set I’ (Diagenode). 10 µl of every sample containing 50 pg of precipitated DNA were used for library preparation according to the manufacturer’s protocol for Template Preparation and Library Amplification ...