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Citations for Diagenode :
1601 - 1650 of 2740 citations since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: ... and 12 μg of high molecular weight gDNA was sheared to a size distribution between 15 and 20 kbp using the Megaruptor® 2 (Diagenode, Denville, NJ, USA). For each accession ...
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bioRxiv - Genomics 2022Quote: ... Sonication was carried out to shear chromatin into 200-500 bp size fragments using the Bioruptor Pico (Diagenode). 20 to 50 cycles of 30 seconds/cycle ...
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bioRxiv - Genomics 2022Quote: ... sheared to a length of ∼35 Kb using a Megaruptor® (Diagenode) and size selected in the 7-50 Kb range on a Bluepippin system (Sage Science ...
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bioRxiv - Genetics 2022Quote: ... 0.5 μg (2 ul) of H3K9me3 antibody (Diagenode) and 0.5 μL of biotin-myc antibody (Abcam ...
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bioRxiv - Genomics 2022Quote: ... and fragmented by a Bioruptor Pico (10 cycles, 30 sec on/30 sec off; Diagenode). The sonicated solution was diluted (1:5 ratio ...
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bioRxiv - Genomics 2022Quote: ... 5µg aliquots of 3C DNA were sonicated with Bioruptor (Diagenode) in 50 µl volumes in sonication buffer (50 mM Tris-HCl ...
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bioRxiv - Genomics 2022Quote: ... DNA was sheared for 26 cycles of shearing (15s on, 30s chilling) using a Bioruptor sonicator (Diagenode), then size selected using SPRI beads (Beckman ...
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bioRxiv - Genomics 2022Quote: ... We sheared the genomic DNA with the Megaruptor® 3 (Diagenode) and purified them using AMPure PB magnetic beads (Pacific Biosciences ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Proximity-ligated DNA was sheared using a Bioruptor (Diagenode, Dennville, New Jersey, USA), and appropriately sized fragments (200-600 bp ...
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bioRxiv - Genomics 2022Quote: ... Lysates were sonicated by ultrasound homogenizer (Bioruptor, Diagenode) for 10 min at 4°C ...
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bioRxiv - Genetics 2022Quote: ... Extracted chromatin was sheared with the Bioruptor sonicator (Diagenode) using 15 or 30 cycles (for biological replicate 1 and 2 ...
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bioRxiv - Genetics 2022Quote: ... Lysates were further disrupted by using a Bioruptor plus (Diagenode) with 30 s sonication and 30 s break for 10 cycles ...
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bioRxiv - Genetics 2022Quote: ... Enrichments were measured as Cq values of each primer pair relative to Cq values from ZmCopia primers (Diagenode #C17040005), which amplified a Copia retrotransposon that is not enriched in centromeres ...
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bioRxiv - Genetics 2022Quote: ... on ice for 6 min and then sonicated with 30 s ON and 60 s OFF for 16 cycles with Bioruptor Pico sonication device (Diagenode SA, B01060010) at 4 ℃ ...
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bioRxiv - Genetics 2022Quote: ... and 300 μl of the extract was sonicated with Bioruptor (Diagenode, 30 sec ON/30 sec OFF ...
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bioRxiv - Genetics 2022Quote: ... Immunoprecipitation was performed using 10 μg of chromatin and 2.5 μg of human antibody (H3K4me3 [RRID:AB_2616052, Diagenode C15410003] ...
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bioRxiv - Genetics 2022Quote: ... Immunoprecipitation was performed using 10 μg of chromatin and 2.5 μg of human antibody (H3K4me3 [RRID:AB_2616052, Diagenode C15410003], H3K4me1 [RRID:AB_306847, Abcam ab8895], and H3K27ac [RRID:AB_2637079, Diagenode C15410196]). Final DNA purification was performed using the GeneJET PCR Purification Kit (Thermo Scientific ...
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bioRxiv - Genetics 2022Quote: ... Chromatin was sonicated using a Bioruptor Pico (Diagenode) to an average size of 200–700 bp ...
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bioRxiv - Developmental Biology 2022Quote: ... samples were sonicated in a Bioruptor Plus (Diagenode) to reduce the average DNA fragment size to 300bp ...
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bioRxiv - Evolutionary Biology 2022Quote: ... DNA was diluted to 100 ng/uL (10,000 ng total) and sheared to approximately 500 bp using a BioRupter (Diagenode, Denville, NJ). We performed a double-sided size selection using SPRI beads (46 ...
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bioRxiv - Genomics 2022Quote: ... by boiling at 95°C for 5 minutes followed by 5 sonication cycles of 30 s ON / 30 s OFF on the Bioruptor Pico sonicator (Diagenode) at 4°C ...
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bioRxiv - Genomics 2022Quote: ... the nuclei were briefly sonicated for 5 seconds at 4°C in a Bioruptor Pico sonicator (Diagenode). Permeabilized nuclei were incubated for 10 minutes at 37°C in a thermoshaker ...
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bioRxiv - Genomics 2022Quote: ... Chromatin was sheared in a Bioruptor Pico sonicator (Diagenode) at 4°C by 5 cycles of 30 s ON ...
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bioRxiv - Plant Biology 2022Quote: ... 250 pg of immunoprecipitated (IP) or genomic (INPUT) DNA were used to prepare libraries with the MicroPlex Library Preparation kit v2 (Diagenode). Quality of libraries was validated using Agilent / Advanced Analytical fragment analyzer ...
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bioRxiv - Plant Biology 2022Quote: ... or anti-acetyl-H3K27 (C15200184; Diagenode).
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bioRxiv - Plant Biology 2022Quote: ... anti-trimethyl-H3K27 (C15200181; Diagenode), anti-trimethyl-H3K4 (07-473 ...
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bioRxiv - Plant Biology 2022Quote: ... Cells were ruptured by 5 × 15 sec sonication in an ice bath in Bioruptor UCD-200 (Diagenode) at medium intensity with 2 min breaks on ice ...
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bioRxiv - Plant Biology 2022Quote: ... anti-H3 (C15200011; Diagenode), anti-trimethyl-H3K27 (C15200181 ...
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bioRxiv - Plant Biology 2022Quote: ... anti-monomethyl-H3K27 (C15410045; Diagenode) or anti-acetyl-H3K27 (C15200184 ...
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bioRxiv - Plant Biology 2022Quote: ... and then the mixture was sonicated to shear DNA into 250 to 600 bp fragments using Bioruptor Plus sonication system (Diagenode, Belgium). The lysates were centrifuged at 20,000 × g for 10 min at 4°C ...
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bioRxiv - Plant Biology 2022Quote: ... high molecular weight DNA was sheared with a Megaruptor (Diagenode) set to a 40 kb fragment size ...
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bioRxiv - Plant Biology 2022Quote: ... 1× protease inhibitor cocktail) and sonicated with 25 cycles of 30-s-long pulses (30-s intervals) using a Bioruptor Plus (Diagenode, Denville, NJ). Nuclear lysates were cleared with 2 rounds of centrifugation at 13,000 × g for 5 min at 4 °C ...
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bioRxiv - Plant Biology 2022Quote: ... After sonication with Bioruptor (Diagenode, Denville, NJ), samples were subjected to centrifugation at 15,000X g for 1 h at 4°C ...
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bioRxiv - Physiology 2022Quote: ... After sonication by a Bioruptor device (Diagenode), DNA was purified with 25:24:1 mixture of phenol ...
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bioRxiv - Microbiology 2022Quote: ... The immuno-precipitated DNA and the input DNA was purified using DNA purifying slurry (Diagenode, C03080030). The purified DNA was used for performing qPCR against Ubc9 ...
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bioRxiv - Genomics 2022Quote: N6-methyladenosine (m6A) Antibody (Diagenode C15200082-50 – RRID:AB_2892212), referred hereafter as “DG1”.
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bioRxiv - Physiology 2022Quote: ... Chromatin was sonicated using a Bioruptor Pico instrument (Diagenode, Denville, NJ, USA). Chromatin preparations were subjected to ChIP using a ChIP-IT High Sensitivity Kit and Protein G Agarose Prepacked Columns (Active Motif ...
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bioRxiv - Neuroscience 2022Quote: ... Genomic DNA was sheared at 20kb target size with a Megaruptor 2 instrument (Diagenode). BluePippin size selection (Sage Science ...
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bioRxiv - Genomics 2022Quote: ... Cell lysis was facilitated by passing the lysates through 26G needle 10 times during the incubation on ice, and by 6 cycles of sonication (30 sec “on”/30 sec “off”, low input) on a Bioruptor Pico (Diagenode). Lysates were then treated with 40 U DNase I (Worthington ...
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bioRxiv - Genomics 2022Quote: ... Samples were sheared to a target size of 350bp using a Bioruptor 300 (Diagenode) sonicator ...
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bioRxiv - Molecular Biology 2022Quote: ... 30 s off using a Bioruptor Pico sonicator (Diagenode #B01060010).
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bioRxiv - Molecular Biology 2022Quote: ... DNA was purified using phenol/chloroform and 2 µg of purified 3C sample was sonicated using the Bioruptor Pico (Diagenode). Biotinylated DNA was captured using MyOne Streptavidin T1 magnetic beads (Life Technologies ...
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bioRxiv - Microbiology 2022Quote: ... and incubation on ice for 30 min followed by sonication for 45 min (30 s on, 30 s off) in a Bioruptor Pico (Diagenode) at 4°C ...
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bioRxiv - Immunology 2022Quote: ... Tregs were subjected to sonication using a Bioruptor® Pico sonication device (Diagenode) to obtain 100–500-bp chromatin fragments ...
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bioRxiv - Cell Biology 2022Quote: ... DNA was purified by phenol-chloroform treatment followed by ethanol precipitation and then fragmented by sonication with a model UCD-200 Bioruptor (Diagenode). After the biotin-labeled DNA was pulled down with Dynabeads Streptavidin T1 (65601 ...
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bioRxiv - Microbiology 2022Quote: ... The cells were lysed and sonicated with bioruptor (Diagenode). Sonicated chromatin was diluted and precleared with protein A beads followed by incubation with 4ug H3K27ac (Abcam ...
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bioRxiv - Microbiology 2022Quote: ... cells were sonicated using a Bioruptor® Pico sonication device (Diagenode) for 15 cycles of 30 seconds ON/OFF ...
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bioRxiv - Microbiology 2022Quote: ... Genomic DNA was sheared with the Megaruptor 3 system (Diagenode) using 35-40 cycles ...
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bioRxiv - Microbiology 2022Quote: ... Chromatin was sheared in the Bioruptor Plus (Diagenode, Belgium) at high power for 60 rounds of 30 sec pulse ON and 45 sec pulse OFF ...
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bioRxiv - Microbiology 2022Quote: ... resuspended in 1 ml PBS and sonicated at high intensity for 5 min in 30 s on 30 s off cycles using a Bioruptor (Diagenode, Denville, NJ, USA). Protein was determined in all samples by the Bradford method and a known mass of sample was mineralized in concentrated HNO3 trace metal grade (Thermo Fisher Scientific ...