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Citations for Illumina :
1 - 50 of 92 citations for Zika Virus VLP E prM M Proteins since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2024Quote: ... Raw genomic reads obtained by Illumina HiSeq 2500 and NovaSeq 6000 (for D. grisea, E. coxiae, Galdieria sp. ACUF 613, M. erythrocladioides, P. aerugineum, and T. oligopyrenoides) and by Illumina HiSeq 2500 and NovaSeq 6000 plus Oxford Nanopore MinION Mk 1B (for R ...
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bioRxiv - Immunology 2022Quote: ... The virus sequence was confirmed by Illumina sequencing and did not differ from the parental virus ...
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bioRxiv - Microbiology 2023Quote: ... and Respiratory Virus Oligo Panel v2 (Illumina #20044311). Tagmented cDNAs were amplified to add indexes and adapters ...
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bioRxiv - Immunology 2021Quote: ... The identity of the virus was confirmed by Illumina sequencing (see supplementary table 1).
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bioRxiv - Cancer Biology 2023Quote: ... (M) Tagmentation Kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: ... and E-Risk Study and from Illumina EPIC 850k Arrays in the Understanding Society study and the CALERIE Trial ...
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bioRxiv - Molecular Biology 2021Quote: ... (M) Tagmentation kit (Illumina, 20018705), with 6 cycles of amplification ...
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bioRxiv - Molecular Biology 2022Quote: ... (M) Tagmentation kit (Illumina, 20018705), with 6 cycles of amplification ...
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bioRxiv - Microbiology 2022Quote: ... (M) Tagmentation Kit (Illumina, Inc.) according to the manufacturer’s protocol ...
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bioRxiv - Microbiology 2024Quote: ... (M) Tagmentation Kit (Illumina Co.), and sequencing was run with the MiSeq Reagent Kit v3 (2 × 300 bp) ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation for VLP genomic DNA involved using >25ng input DNA with the Nextera DNA Flex Library Preparation Kit (currently named Illumina DNA prep, Illumina, CA, USA). Deviating from the Illumina protocol’s full reaction volume (50 µL) ...
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bioRxiv - Pathology 2024Quote: ... insecticola (E, F) based on SNPs identified from Illumina sequencing ...
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bioRxiv - Genomics 2020Quote: ... Nextera Flex Enrichment Kit with Respiratory Virus Oligo Panel (Illumina Inc, USA) for viral RNA capture and sequencing ...
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bioRxiv - Genomics 2020Quote: ... with the respiratory virus oligo panel including SARS-CoV-2 probes (Illumina, San Diego ...
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bioRxiv - Neuroscience 2022Quote: ... according to the manufacturer’s instructions (Illumina, Part #15031047 Rev. E).
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bioRxiv - Microbiology 2019Quote: ... Libraries from different virus isolates were pooled and sequenced on iSeq 100 (Illumina) with 2×75bp reads.
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bioRxiv - Genomics 2020Quote: ... samples were enrichment with the Respiratory Virus Oligos Panel (Illumina, Catalog no. 20042472), which features ∼7800 probes designed to detect respiratory viruses ...
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bioRxiv - Developmental Biology 2021Quote: ... m-z+ or m-z−) were selected for library construction using the Nextera XT DNA Library Preparation Kit (Illumina). The single embryo RNA-seq libraries were non-stranded and only PolyA+ RNA was captured ...
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bioRxiv - Immunology 2021Quote: Virus stocks were sequenced using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). In brief ...
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bioRxiv - Microbiology 2021Quote: ... (M) Tagmentation kit (Illumina, San Diego, California, USA), following the manufacturer’s guidelines ...
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bioRxiv - Microbiology 2023Quote: ... followed by library preparation (Illumina DNA Prep, (M) Tagmentation ...
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bioRxiv - Microbiology 2020Quote: ... The virus was passaged three times in VeroE6 cells and genotype sequence confirmed by Illumina sequencing ...
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bioRxiv - Molecular Biology 2023Quote: Ribo-Zero Magnetic Kit H/M/R (Epicentre/Illumina) was used to remove ribosomal RNAs and to enrich mRNAs ...
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bioRxiv - Molecular Biology 2023Quote: ... The stability of the virus genotype after passage was confirmed via Sanger sequencing and by Illumina sequencing ...
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bioRxiv - Genomics 2020Quote: ... We used Ribo-Zero Magnetic Kit H/M/R (Illumina) to remove rRNAs from total RNA samples for analyses of non-polyadenylated RNAs.
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bioRxiv - Evolutionary Biology 2020Quote: ... raw sequence data were filtered for contaminants (E. coli, PhiX, Illumina adaptors or primers) and low quality reads using bowtie2_db (Langmead & Salzberg ...
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bioRxiv - Microbiology 2020Quote: ... 0.75 M sucrose) and R1804M Ready-Lyse lysozyme solution (Illumina, USA). After 15 minutes of incubation at 37°C ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and NextSeq 500 Mid Output Kit PE75 (120 M reads) (Illumina) were used following manufacturer’s instructions ...
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bioRxiv - Plant Biology 2024Quote: ... and second strand synthesis buffer (containing dNTPs, RNase H and E. coli polymerase I, Illumina) was added so that the second strand was produced by nick-translation ...
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bioRxiv - Genomics 2021Quote: ... using the Illumina TruSeq mRNA library preparation protocol (poly-A selected) (Illumina; Part: 15031047 Revision E). mRNA-Seq libraries were sequenced on an Illumina NovaSeq 6000 platform to generate >66 M paired end reads per sample (Min ...
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bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
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bioRxiv - Immunology 2022Quote: Identity of virus stocks were confirmed by next-generation sequencing using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). RNA was purified from Trizol-inactivated material using a Direct-zol RNA Miniprep kit (Zymo Research ...
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bioRxiv - Pathology 2020Quote: Library preparation for NHBE samples infected with influenza A virus (IAV) was performed using the TruSeq Stranded mRNA Library Prep Kit (Illumina) with Poly-A enrichment ...
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bioRxiv - Microbiology 2022Quote: ... Passage 1 virus stocks were further produced in Vero TMPRSS2 cells and the presence of mutations was confirmed by Illumina sequencing ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were generated for three separate plants for each virus Libraries were sequenced (single-end, 75 nt) using an NextSeq 500 platform (Illumina).
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bioRxiv - Neuroscience 2020Quote: ... 400 M clustered flowcells (75 cycles) were sequenced with the NextSeq500 platform (Illumina) in 75bp single read mode ...
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bioRxiv - Genomics 2021Quote: ... DNA fragments of the SARS CoV-2 genome were hybridized with biotinylated respiratory virus oligos (Illumina Inc., San Diego, CA, USA). The DNA fragments hybridized with the custom oligos were captured using streptavidin magnetic beads ...
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bioRxiv - Microbiology 2023Quote: The whole genome sequence of the mink-derived H5N1 clade 2.3.4.4b virus was determined using the Illumina MiSeq sequencing platform (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Neuroscience 2019Quote: ... using the ScriptSeq Complete Gold Kit (H/M/R) (Illumina Inc., San Diego, CA). Samples were fragmented ...
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bioRxiv - Genomics 2021Quote: ... 0.5 µl BLT Bead-Linked Transposase (both contained in Illumina® DNA Prep, (M) Tagmentation Catalogue No 20018704 ...
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bioRxiv - Bioengineering 2023Quote: The analysis for this paper was performed on 81 M raw reads from Illumina deep sequencing collected following the addition at four time points of the small molecule pomalidomide to a CRISPR library consisting of 48 well-characterized guide sequences ...
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bioRxiv - Genomics 2020Quote: ... and rRNA depletion was performed using Ribo-Zero Magnetic Kit H/M/R (Epicentre/Illumina).
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bioRxiv - Plant Biology 2021Quote: ... Sequence analysis of 40 M reads was performed with a NovaSeq 6000 Sequencing System (Illumina). Library preparation and sequencing were conducted by Macrogen Japan ...
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bioRxiv - Microbiology 2021Quote: ... MERS-CoV samples were treated with RiboZero H/M/R rRNA (Illumina, San Diego, CA) depletion mix following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2020Quote: All newly generated sequencing data have been deposited in the European Genome-phenome Archive (www.ebi.ac.uk/ega) with accession number EGAS00001004496 (sequencing) or ArrayExpress (www.ebi.ac.uk/arrayexpress/) with accession numbers E-MTAB-9297 (Illumina EPIC methylation arrays) and MTAB-9298 (Illumina 450k methylation arrays) ...
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bioRxiv - Genomics 2019Quote: ... The sequencing library with the mean insert size of 429bp (agarose gel, fraction E) was sequenced using TruSeq Rapid SBS Kit v2 (Illumina), in paired end mode ...
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bioRxiv - Genomics 2020Quote: Total RNA was extracted from Epstein–Barr-virus-transformed lymphoblastoid cell lines (LCLs) by following the Illumina TruSeq v2 RNA Sample Preparation protocol (Illumina, Inc., San Diego, CA) by the Department of Genetic Medicine and Development at the University of Geneva ...
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bioRxiv - Genomics 2022Quote: ... A transposase-based library was prepared for each sample with DNA Prep (M) Tagmentation kit (Illumina) at the Australian Genome Research Facility (AGRF ...
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bioRxiv - Microbiology 2019Quote: ... DNA was sequenced on a ∼40 Gb (i.e. 130 M reads) mid-output NextSeq 500 System (Illumina Inc.) 300 cycle (2 × 150 bp ...
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bioRxiv - Cell Biology 2023Quote: ... Library preparation from RNA is performed with amplification (TruSeq Stranded Total RNA H/M/R-Gold, ILLUMINA®), either through automation (MICROLAB Star® ...