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Citations for Illumina :
1 - 50 of 563 citations for Vitamin K epoxide reductase complex subunit 1 VKORC1 Antibody Biotin since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2022Quote: ... K-mers from Illumina read data were counted ...
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bioRxiv - Genomics 2020Quote: ... Erroneous k-mers from Illumina paired-end reads were removed using rCorrector [91] ...
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bioRxiv - Genomics 2021Quote: ... K-mer based analysis from Illumina sequencing data derived from the Rothamsted population also indicated a genome size from 3,400 Mb to 3,550 Mb ...
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bioRxiv - Genomics 2024Quote: ... To calculate k-mer distributions from Illumina 150PE sequenced (see below ...
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bioRxiv - Neuroscience 2024Quote: ... 3.5ug cDNA was biotin labeled (Nugen Illumina) 1.5ug of cDNA was hybridized to the Illumina Mouse WG-6 V2.0 BeadChip containing 45821 probes ...
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bioRxiv - Genomics 2020Quote: ... so k-mers were collected later from Illumina whole genome sequencing reads instead ...
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bioRxiv - Genomics 2023Quote: ... a 51-bp k-mer matrix from Illumina paired raw reads of 136 lablab accessions was created using Jellyfish (v ...
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bioRxiv - Genomics 2024Quote: ... using parental k-mer databases created from Illumina reads with meryl v1.3 ...
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bioRxiv - Genomics 2021Quote: ... First a k-mer profile was generated from Illumina reads using jellyfish 2.3.0 tools (Marçais & Kingsford 2011 ...
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bioRxiv - Plant Biology 2021Quote: ... a K-mer frequency distribution was generated from Illumina 2×150 bp paired reads (described below ...
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bioRxiv - Genetics 2024Quote: ... the Feline 63 K SNP genotyping array (28) (Illumina), to investigate the effects of genetic testing on the entire genome ...
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bioRxiv - Genomics 2024Quote: Applying K-mer-based techniques to Illumina short reads from Illumina sequencing libraries allowed us to estimate the genome’s size ...
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bioRxiv - Synthetic Biology 2023Quote: ... The biotin-labeled fragments were further enriched and sequenced by Illumina Novaseq ...
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bioRxiv - Genomics 2022Quote: ... The variants were filtered with Merfin using k-mers derived from Illumina short reads ...
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bioRxiv - Physiology 2023Quote: Standard Argyrosomus regius gonadotropin subunit amino acidic sequences (alpha common, beta-FSH and beta-LH) were deduced from RNAseq (Illumina and Nanopore) analysis of mRNA extracted from meagre pituitaries ...
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bioRxiv - Genomics 2021Quote: ... and a similar k-mer distribution pattern to GenomeScope2 (performed with Illumina PE reads). Additionally ...
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bioRxiv - Genomics 2021Quote: ... was generated and we incubated 7 µM Tn5059 with 10 µM annealed transposon for 30 min at room temperature and then diluted to 0.7 µM Tn5059 transposome complex with standard storage buffer (Illumina).
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bioRxiv - Genomics 2023Quote: Genome size was estimated by K-mer (17-mer) analysis using reads generated by Illumina Hiseq sequencing according to Lander-waterman theory ...
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bioRxiv - Molecular Biology 2024Quote: ... Genome-wide DNA methylation patterns were evaluated by Infinium Human Methylation 850 K BeadChips (Illumina), which determine the methylation levels of 853,307 CpG sites ...
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bioRxiv - Molecular Biology 2023Quote: ... K-mer filtering (which removes reads with a 31-mer match to an Illumina spike-in), and Entropy filtering (>0.90 ...
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bioRxiv - Genetics 2023Quote: We used an SNP-genotyping array (Canine 230 K Consortium BeadChip Array, Illumina, San Diego, CA, USA) to investigate the effects of genetic testing on the whole genome ...
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bioRxiv - Genomics 2023Quote: ... (Marçais and Kingsford, 2011) and Genomescope (v2.0) (max k-mer coverage = 1,000,000) (Ranallo-Benavidez et al., 2020) from Illumina short reads ...
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bioRxiv - Genomics 2024Quote: ... we employed a pipeline that uses Meryl (v1.0) to count the k-mers of length 21 from Illumina reads using the following command: We then used Merqury (v1.1)74 ...
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bioRxiv - Genomics 2020Quote: The genome size was estimated using the k-mer histogram method with Kmergenie v1.7051 (Chikhi and Medvedev 2014) from Illumina data.
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bioRxiv - Neuroscience 2023Quote: ... biotin-labeled and directly hybridized to the Illumina HumanHT-12 v4.0 Expression BeadChip (47,231 probes) (Illumina, San Diego, CA, USA). Slides were scanned using the Illumina iScan and the signal was extracted and normalized using the GenomeStudio software ...
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bioRxiv - Microbiology 2021Quote: A total of 390 out of 405 animals were genotyped using the Porcine 70 k GGP Porcine HD Array (Illumina, San Diego, CA) containing 68,516 single nucleotide polymorphisms (SNPs) ...
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bioRxiv - Genomics 2020Quote: ... or homogenized tissues were digested with proteinase K prior to DNA isolation using MasterPure™ DNA Purification Kit (Epicentre, by Illumina, Madison, United States) according to manufacturer’s instructions.
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bioRxiv - Cell Biology 2024Quote: ... were pooled at a 1:1:1:etc ratio before sequencing on an Illumina NextSeq 500/550 instrument using a version 2 kit (Illumina). Fastq files were generated for each library in Illumina BaseSpace ...
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bioRxiv - Cancer Biology 2024Quote: ... 1% of PhiX (Illumina) was used as run control ...
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bioRxiv - Genomics 2023Quote: ... All libraries were pooled and subjected to paired-end 75 bp sequencing (paired- end 76 nt reads with the first 1 nt of Read 1 and the last 1 nt of Read 2 trimmed) using the NextSeq500 system (Illumina, CA, USA). For each library ...
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bioRxiv - Microbiology 2023Quote: ... 1 μl of forward and 1 μl of reverse 25 μM PCR primers (Illumina), and 0.5 μl of Phusion high-fidelity DNA polymerase (New England Biolabs) ...
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bioRxiv - Neuroscience 2023Quote: ... collected with the magnet and resuspended in 24ul of Tagmentation Mix (1:1 Illumina 2× Tagmentation buffer ...
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bioRxiv - Immunology 2021Quote: ... Group 1 (The Netherlands, Illumina), Group 2 (France ...
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bioRxiv - Microbiology 2021Quote: ... 1×75 cycles (Illumina, USA). Image analysis was performed in real time by the NextSeq Control Software and Real Time Analysis running on the instrument computer ...
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bioRxiv - Systems Biology 2022Quote: ... 1% PhyX spike-in (Illumina) was added then pooled ...
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bioRxiv - Immunology 2024Quote: ... 1 µL of TDE1 (Illumina), 0.25 µL of 5% digitonin (Promega) ...
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bioRxiv - Molecular Biology 2024Quote: ... 1 ng of PCR-1 product was used as template with TruSeq indexing primers (Illumina) and 10 cycles of PCR ...
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bioRxiv - Genomics 2024Quote: ... Miniaturization involved testing libraries at 1/6th (IDT mini) or 1/8th (Roche mini, Illumina mini) of reaction volume tailoring input DNA to each kit between 24-45 ng total (Table 2) ...
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bioRxiv - Neuroscience 2021Quote: ... 1 μtagment DNA enzyme (Nextera, Illumina), l nuclease free water ...
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bioRxiv - Immunology 2021Quote: ... 1 μl of transposase (Nextera, Illumina) was added and samples were incubated at 37°C for 10 minutes followed by two washes with low-salt buffer ...
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bioRxiv - Cell Biology 2024Quote: ... A 1% PhiX sequencing control (Illumina) was spiked in ...
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bioRxiv - Immunology 2020Quote: ... cells were lysed in lysis buffer for 1 minute and transposed with Tagment DNA Enzyme 1 (Illumina) for 30 minutes ...
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bioRxiv - Immunology 2021Quote: Single-cell antibody repertoire libraries were sequenced on an Illumina NovaSeq 6000 system (Illumina RTA Version: V3.4.4) using a 26 x 91 bp read configuration.
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bioRxiv - Genetics 2020Quote: ... using a bead-to-DNA ratio of 1:1 before high-throughput sequencing on the MiniSeq system (Illumina). Libraries were sequenced 1 × 75bp for a minimum coverage of 2 million read depth ...
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bioRxiv - Genomics 2022Quote: ... Consensus LADs (between the Nanopore-DamID undiluted and 1:1/10 dilution and between the two Illumina replicates) were determined using intersectBed.
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bioRxiv - Neuroscience 2020Quote: ... Index 1: 8bp (Illumina i7 sample index); Read 2 ...
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bioRxiv - Neuroscience 2020Quote: ... Index 1: 8bp (Illumina i7 sample index); Read 2 ...
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bioRxiv - Neuroscience 2020Quote: ... Index 1: 8bp (Illumina i7 sample index); Read 2 ...
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bioRxiv - Genomics 2021Quote: ... 0.4 µM oligo 1 (a truncated Illumina read 1 sequence followed by six random bases ...
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bioRxiv - Synthetic Biology 2022Quote: ... The Read 1 sequence (excluding Illumina barcodes) was aligned to a short reference sequence of AAV9: