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Citations for Illumina :
1 - 50 of 3412 citations for Protein DNA Interaction Assay since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2019Quote: ... DNA MethylationEPIC beadarray shares the Infinium HD chemistry Assay (Illumina Inc. USA) used to interrogate the cytosine markers with HumanMethylation450 beadchip ...
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bioRxiv - Genomics 2023Quote: ... The constructed Hi-C sequencing library was first subjected to a test run of sequencing to evaluate valid interaction read pairs using HiCPro (v3.1.0) (Servant et al., 2015) before high coverage sequencing by Illumina NovaSeq 6000 to yield 705 Gb (∼138× genome coverage ...
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bioRxiv - Molecular Biology 2023Quote: ... coli transposition assays were mixed with 5 µL of tagmentation DNA buffer (Illumina) and 1 µL of amplicon tagmentation mix (Illumina ...
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bioRxiv - Developmental Biology 2022Quote: ... DNA was measured again with Qubit dsDNA HS Assay Kit and 65ng of mononucleosomal purified DNA was used for NEBNext Ultra II DNA Library Prep Kit (Illumina) with size selection ...
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bioRxiv - Genetics 2021Quote: We next examined the interaction between the average length of elements and correlation cut-offs when sequencing error was 0.1% (Illumina sequencing error rate). We randomly generated truncated elements with average lengths between 300bps and 2750bps (10 - 90% of the full length element ...
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bioRxiv - Genomics 2023Quote: ... Bisulfite converted DNA was then put through the standard Infinium HD array based methylation assay (Illumina) with Illumina Infinium HumanMethylation EPIC BeadChips ...
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bioRxiv - Bioengineering 2020Quote: The prepared DNA from each assay was sequenced via two SP lanes of an NovaSeq 6000 (Illumina) with the help of the University of Minnesota Genomics Center ...
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bioRxiv - Neuroscience 2023Quote: RNA-Sequencing Assay Library Preparation Sequencing libraries were constructed using TruSeq DNA V2 (Illumina, San Diego, CA) sample prep kits and quantified using qPCR (Kapa Biosystems ...
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bioRxiv - Genetics 2019Quote: ... A subgroup of subjects comprising 48 SA and 48 non-SA were chosen for the pilot genome-wide genotyping assay in Illumina iScan system using the HumanOmni ZhongHua-8 v1.3 DNA Analysis BeadChip Kit (Illumina, Inc.) at the Li Ka Shing Institute of Health Sciences of the Chinese University of Hong Kong ...
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bioRxiv - Cancer Biology 2019Quote: ... cDNA was quantified using the High Sensitivity DNA Assay on the Agilent 2100 Bioanalyser and paired end Nextera XT (Illumina) libraries were made and sequenced ...
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bioRxiv - Molecular Biology 2023Quote: We constructed an assay for transposase-accessible chromatin (ATAC) using a Tn5-Nextera DNA library prep kit (Illumina, San Diego, CA, USA), following the manufacturer’s protocol (48) ...
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bioRxiv - Developmental Biology 2021Quote: Approximately 50,000 nephron progenitor cells were used to generate each sequencing library for the assay for transposase-accessible chromatin (ATAC-seq) using the Nextera DNA Flex Library Prep Kit (Illumina FC-121-1030) with modifications according to a previously published method (Buenrostro et al. ...
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bioRxiv - Cell Biology 2020Quote: Infinium Methylation EPIC Bead Chip assay genome-wide DNA methylation profiles of HLFs were generated using Illumina’s Infinium Methylation EPIC Bead Chip assay (EPIC Array) (Illumina, San Diego, CA, USA) at the Genomics and Proteomics Core Facility at DKFZ (Heidelberg ...
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bioRxiv - Genomics 2020Quote: The DNA samples were genotyped with various low-density assays and were imputed to the combination of Illumina BovineHD (Illumina, San Diego, CA) and the GeneSeek Genomic Profiler F250 (GeneSeek ...
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bioRxiv - Neuroscience 2022Quote: ... The input sample and enriched DNA samples obtained from the ChIP assays were used for library construction using the TruSeq ChIP Sample Prep Kit (Illumina; San Diego, CA) according to manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2021Quote: Whole-genome amplified products were normalized to 150 ng/μL (single cells and sibling embryos) or 50 ng/μL (bulk parental DNA) before downstream processing with the Infinium HD assay super protocol (Illumina, San Diego, CA, US). Single-cell ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation for VLP genomic DNA involved using >25ng input DNA with the Nextera DNA Flex Library Preparation Kit (currently named Illumina DNA prep, Illumina, CA, USA). Deviating from the Illumina protocol’s full reaction volume (50 µL) ...
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bioRxiv - Genetics 2020Quote: ... were genotyped in 1,012 F2 mice by Illumina BeadArray genotyping (Illumina Golden Gate assay) on the BeadXpress platform as per the manufacturer’s instructions and were added to the analysis ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Library preparation (DNA/RNA: TruSeq DNA Nano Kit (Illumina); 100 ng per sample ...
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bioRxiv - Molecular Biology 2023Quote: ... DNA libraries were prepared from 1µg DNA using the NEBNext Ultra II DNA Library Prep Kit (Illumina) following manufacturer’s instructions and sequencing was performed by Novogene (Cambridge ...
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bioRxiv - Genomics 2019Quote: ... DNA samples were subjected to TruSeq DNA library kit (Illumina) and sequenced on the Illumina Sequencer X10 with paired-end 150 bp sequence reads ...
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bioRxiv - Molecular Biology 2019Quote: ... Tagmented DNA was amplified using Nextera DNA CD Indexes (Illumina). Samples were placed overnight at 4 °C following the tagmented DNA amplification step ...
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bioRxiv - Microbiology 2023Quote: ... DNA libraries were prepared using Illumina DNA prep kit (Illumina) and sequenced on the MiSeq instrument using a 600 cycle v3 cartridge ...
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bioRxiv - Genomics 2024Quote: ... DNA libraries were prepared (TruSeq Nano DNA HT kit, Illumina), characterized with regards to size (LabChip DX Touch ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation for VLP genomic DNA involved using >25ng input DNA with the Nextera DNA Flex Library Preparation Kit (currently named Illumina DNA prep, Illumina, CA, USA). Deviating from the Illumina protocol’s full reaction volume (50 µL) ...
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bioRxiv - Genetics 2021Quote: ... DNA libraries were prepared from 1 ng of genomic DNA using Nextera XT DNA Library Prep kits (Illumina) for low fluorescence bulks and for high fluorescence bulks (control populations were not sequenced) ...
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bioRxiv - Microbiology 2020Quote: ... Genomic DNA libraries were constructed from 1.2ng of DNA using the Nextera XT DNA Library Preparation kit (Illumina), following the manufacturer’s protocol ...
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bioRxiv - Microbiology 2021Quote: IDT for Illumina TruSeq DNA UD Indexes 20022370 or TruSeq DNA CD Indexes 20015949 (Integrated DNA Technologies, Illumina) were used in place of NEBNext adaptors ...
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bioRxiv - Cancer Biology 2021Quote: ... Infinium HD FFPE QC Assay (Illumina, Inc.) was used by performing a quantitative PCR of FFPE DNA on CFX96™ Real-Time PCR Detection System (BioRad) ...
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bioRxiv - Genomics 2024Quote: ... The COVIDSeq Assay amplicon (Illumina®, USA) sequencing protocol was followed ...
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bioRxiv - Evolutionary Biology 2022Quote: ... 2.5 μL Tagment DNA enzyme (Nextera DNA sample preparation kit; Illumina), and 22.5 μL nuclease-free water ...
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bioRxiv - Developmental Biology 2024Quote: DNA-sequencing libraries were prepared using the DNA Prep kit (Illumina) with 500 ng of whole genome-amplified DNA (single PGC samples ...
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bioRxiv - Microbiology 2024Quote: DNA libraries were prepared with the Illumina DNA Prep kit (Illumina) following the Illumina DNA Prep Reference Guide v10 ...
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bioRxiv - Microbiology 2021Quote: ... DNA libraries were generated using the 24 extracted DNA with the Nextera XT DNA library preparation kit (Illumina Inc.) according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2020Quote: ... Genomic DNA libraries were constructed from 1.2ng of cleaned DNA using the Nextera XT DNA Library Preparation kit (Illumina) according to the manufacturer’s recommended protocol ...
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bioRxiv - Microbiology 2019Quote: DNA libraries were generated using the 24 extracted DNA with the Nextera XT DNA library preparation kit (Illumina Inc.) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2023Quote: ... Immunoprecipitated DNA and 200ng of input DNA were submitted to library preparation (NEBNext Ultra DNA Library Prep Kit, Illumina). In the library preparation protocol ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Library preparation of the remaining six herbarium samples was outsourced to Fasteris (https://www.fasteris.com/dna/) where DNA was converted into a double-stranded library following a custom TruSeq Nano DNA protocol (Illumina) without prior fragmentation and using a modified bead ratio adapted to small fragments.
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bioRxiv - Microbiology 2023Quote: ... 1 ng of DNA was used to prepare DNA libraries using the Nextera XT DNA Library Preparation Kit (Illumina) and genomic DNA was fragmented with Illumina Nextera XT fragmentation enzyme ...
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bioRxiv - Microbiology 2023Quote: ... DNA-Seq libraries from 2.5 µg of genome DNA were prepared using the TruSeq DNA PCR-free kit (Illumina). Then ...
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bioRxiv - Neuroscience 2022Quote: ... Pellets were lysed and DNA precipitated and DNA was used to generate libraries using TruSeq Nano DNA Library Prep Kit (Illumina), libraries were sequenced using NextSeq 500 Sequencing System (Illumina) ...
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bioRxiv - Genomics 2022Quote: ... The Illumina DNA shotgun library was prepared following the Nextera DNA FLEX low volume protocol with Nextera DNA Combinatorial Dual Indexes (Illumina) for insert sizes 300–350 bp ...
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bioRxiv - Genetics 2020Quote: ChIP-seq and DNase-seq libraries were prepared from 1-5 ng ChIP DNA or DNase DNA samples using NEBNext Ultra II DNA library Prep Kit (Illumina). Libraries were sequenced on an Illumina NextSeq 500 with single-end or paired-end 75 bp reads.
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bioRxiv - Genetics 2019Quote: DNA sequencing libraries were constructed from 1 µg of genomic DNA using TruSeq DNA PCR-free Library Prep kit (Illumina). Sequencing was run on an Illumina HiSeq 2500 apparatus using a paired-end read length of 2×150 pb with the Illumina Reagent Kits as already described (Demars et al ...
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bioRxiv - Cancer Biology 2019Quote: ... Approximately 100 ng genomic DNA of each sample was used for DNA library preparation (TruSeq Nano DNA library preparation kit, Illumina). Subsequently ...
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bioRxiv - Genomics 2022Quote: ... Illumina DNA shotgun libraries were prepared following the Nextera DNA FLEX low volume protocol with Nextera DNA Combinatorial Dual Indexes (Illumina) for fragment sizes 300–350 bp ...
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bioRxiv - Cancer Biology 2023Quote: ... Between 350 and 500ng of tumour DNA were used to prepare DNA sequencing libraries using the TruSeq DNA PCR Free 350bp kit (Illumina). The samples were then sequenced on the Illumina NovaSeq6000 sequencing machine using S4 flow cells to generate 2 x 151 paired-end reads ...
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bioRxiv - Cell Biology 2020Quote: ... DNA libraries were PCR-amplified using Nextera DNA Sample Preparation Kit (Illumina) using the following PCR conditions ...
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bioRxiv - Microbiology 2021Quote: ... DNA libraries were generated using TruSeq Nano DNA Library Prep kit (Illumina) and the 100bp-paired-end reads were sequenced on a HiSeq2500 (Illumina) ...
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bioRxiv - Neuroscience 2021Quote: ... genomic DNA was extracted using QuickExtract ™ DNA Extraction Solution (Illumina, USA), and PCR amplification using primers encompassing the CRISPR target site ...